RNA–Protein interactions for RNA: ENST00000548221.5

NCKAP1L-204, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 3,559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-204ENST00000548221 NISCHQ9Y2I1 1504 aa10.64□□□□□ -0.71
NCKAP1L-204ENST00000548221 CHIC1Q5VXU3 224 aa10.18□□□□□ -0.78
NCKAP1L-204ENST00000548221 AEBP2Q6ZN18 517 aaPredicted RBP10.06□□□□□ -0.8
NCKAP1L-204ENST00000548221 DCAF8L2P0C7V8 631 aa10.01□□□□□ -0.81
NCKAP1L-204ENST00000548221 SHROOM4Q9ULL8 1493 aa9.84□□□□□ -0.83
NCKAP1L-204ENST00000548221 HRCP23327 699 aa9.78□□□□□ -0.84
NCKAP1L-204ENST00000548221 SUPT5HO00267 1087 aaKnown RBP9.77□□□□□ -0.85
NCKAP1L-204ENST00000548221 PELP1Q8IZL8 1130 aaKnown RBP9.75□□□□□ -0.85
NCKAP1L-204ENST00000548221 PPARGC1BQ86YN6 1023 aaKnown RBP9.67□□□□□ -0.86
NCKAP1L-204ENST00000548221 PCGF6Q9BYE7 350 aa9.64□□□□□ -0.87
NCKAP1L-204ENST00000548221 MYT1Q01538 1121 aa9.43□□□□□ -0.9
NCKAP1L-204ENST00000548221 SCAF1Q9H7N4 1312 aaKnown RBP9.37□□□□□ -0.91
NCKAP1L-204ENST00000548221 EHMT2Q96KQ7 1210 aa9.31□□□□□ -0.92
NCKAP1L-204ENST00000548221 MYO15BQ96JP2 1530 aa9.2□□□□□ -0.94
NCKAP1L-204ENST00000548221 PHF23Q9BUL5 403 aaPredicted RBP9.16□□□□□ -0.94
NCKAP1L-204ENST00000548221 ZEB1P37275 1124 aaPredicted RBP9.16□□□□□ -0.94
NCKAP1L-204ENST00000548221 TRIM26Q12899 539 aaPredicted RBP9.16□□□□□ -0.94
NCKAP1L-204ENST00000548221 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.94
NCKAP1L-204ENST00000548221 LOC105371045A0A1W2PR82 267 aa9.12□□□□□ -0.95
NCKAP1L-204ENST00000548221 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
NCKAP1L-204ENST00000548221 ACIN1Q9UKV3 1341 aaKnown RBP9.1□□□□□ -0.95
NCKAP1L-204ENST00000548221 NEUROD1Q13562 356 aa9.08□□□□□ -0.96
NCKAP1L-204ENST00000548221 CENPBP07199 599 aaPredicted RBP9.08□□□□□ -0.96
NCKAP1L-204ENST00000548221 ABCC9O60706 1549 aa9.02□□□□□ -0.97
NCKAP1L-204ENST00000548221 DCAF1Q9Y4B6 1507 aa9.01□□□□□ -0.97
NCKAP1L-204ENST00000548221 CCDC180Q9P1Z9 1646 aa8.98□□□□□ -0.97
NCKAP1L-204ENST00000548221 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
NCKAP1L-204ENST00000548221 TTBK1Q5TCY1 1321 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1L-204ENST00000548221 YTHDC1Q96MU7 727 aaKnown RBP8.94□□□□□ -0.98
NCKAP1L-204ENST00000548221 DIEXFQ68CQ4 756 aaKnown RBP8.91□□□□□ -0.98
NCKAP1L-204ENST00000548221 CCER1Q8TC90 406 aaPredicted RBP8.89□□□□□ -0.99
NCKAP1L-204ENST00000548221 ZCCHC6Q5VYS8 1495 aaKnown RBP8.88□□□□□ -0.99
NCKAP1L-204ENST00000548221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.86□□□□□ -0.99
NCKAP1L-204ENST00000548221 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
NCKAP1L-204ENST00000548221 RANGAP1P46060 587 aaPredicted RBP8.81□□□□□ -1
NCKAP1L-204ENST00000548221 PABPN1Q86U42 306 aaKnown RBP eCLIP8.76□□□□□ -1.01
NCKAP1L-204ENST00000548221 UBTFP17480 764 aaKnown RBP8.7□□□□□ -1.02
NCKAP1L-204ENST00000548221 ANP32EQ9BTT0 268 aa8.7□□□□□ -1.02
NCKAP1L-204ENST00000548221 SCRIBQ14160 1630 aa8.66□□□□□ -1.02
NCKAP1L-204ENST00000548221 ZNF316A6NFI3 1004 aaPredicted RBP8.64□□□□□ -1.03
NCKAP1L-204ENST00000548221 CSRNP3Q8WYN3 585 aa8.63□□□□□ -1.03
NCKAP1L-204ENST00000548221 MIER1Q8N108 512 aa8.63□□□□□ -1.03
NCKAP1L-204ENST00000548221 APLP2Q06481 763 aa8.59□□□□□ -1.03
NCKAP1L-204ENST00000548221 PRKCSHP14314 528 aaPredicted RBP8.58□□□□□ -1.04
NCKAP1L-204ENST00000548221 SUPT16HQ9Y5B9 1047 aaKnown RBP8.56□□□□□ -1.04
NCKAP1L-204ENST00000548221 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
NCKAP1L-204ENST00000548221 RSF1Q96T23 1441 aaPredicted RBP8.55□□□□□ -1.04
NCKAP1L-204ENST00000548221 BCANQ96GW7 911 aa8.55□□□□□ -1.04
NCKAP1L-204ENST00000548221 ATP1B4Q9UN42 357 aaPredicted RBP8.5□□□□□ -1.05
NCKAP1L-204ENST00000548221 HNRNPUL2Q1KMD3 747 aaKnown RBP8.5□□□□□ -1.05
NCKAP1L-204ENST00000548221 CECR2Q9BXF3 1484 aa8.49□□□□□ -1.05
NCKAP1L-204ENST00000548221 ERICH6Q7L0X2 663 aa8.48□□□□□ -1.05
NCKAP1L-204ENST00000548221 CLSPNQ9HAW4 1339 aa8.46□□□□□ -1.06
NCKAP1L-204ENST00000548221 NACADO15069 1562 aa8.44□□□□□ -1.06
NCKAP1L-204ENST00000548221 RB1CC1Q8TDY2 1594 aa8.44□□□□□ -1.06
NCKAP1L-204ENST00000548221 ITGAEP38570 1179 aa8.43□□□□□ -1.06
NCKAP1L-204ENST00000548221 NEFLP07196 543 aa8.4□□□□□ -1.07
NCKAP1L-204ENST00000548221 FKBP8Q14318 412 aa8.4□□□□□ -1.07
NCKAP1L-204ENST00000548221 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
NCKAP1L-204ENST00000548221 DNAJC5BQ9UF47 199 aa8.37□□□□□ -1.07
NCKAP1L-204ENST00000548221 PLPPR3Q6T4P5 718 aa8.36□□□□□ -1.07
NCKAP1L-204ENST00000548221 MROH2BQ7Z745 1585 aa8.35□□□□□ -1.07
NCKAP1L-204ENST00000548221 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
NCKAP1L-204ENST00000548221 P3H3Q8IVL6 736 aa8.28□□□□□ -1.08
NCKAP1L-204ENST00000548221 DEKP35659 375 aaKnown RBP8.27□□□□□ -1.09
NCKAP1L-204ENST00000548221 KCNH8Q96L42 1107 aa8.26□□□□□ -1.09
NCKAP1L-204ENST00000548221 MSH5O43196 834 aa8.25□□□□□ -1.09
NCKAP1L-204ENST00000548221 SOGA1O94964 1423 aa8.25□□□□□ -1.09
NCKAP1L-204ENST00000548221 WIZO95785 1651 aa8.24□□□□□ -1.09
NCKAP1L-204ENST00000548221 NBR1Q14596 966 aa8.23□□□□□ -1.09
NCKAP1L-204ENST00000548221 CCDC136Q96JN2 1154 aa8.23□□□□□ -1.09
NCKAP1L-204ENST00000548221 CDK11AQ9UQ88 783 aaPredicted RBP8.23□□□□□ -1.09
NCKAP1L-204ENST00000548221 TRIM52Q96A61 297 aa8.22□□□□□ -1.09
NCKAP1L-204ENST00000548221 ABCC8Q09428 1581 aa8.22□□□□□ -1.09
NCKAP1L-204ENST00000548221 MYT1LQ9UL68 1186 aa8.21□□□□□ -1.09
NCKAP1L-204ENST00000548221 CCDC88BA6NC98 1476 aa8.21□□□□□ -1.1
NCKAP1L-204ENST00000548221 FAM50AQ14320 339 aaKnown RBP8.2□□□□□ -1.1
NCKAP1L-204ENST00000548221 RTN4Q9NQC3 1192 aaKnown RBP8.2□□□□□ -1.1
NCKAP1L-204ENST00000548221 CEP162Q5TB80 1403 aa8.19□□□□□ -1.1
NCKAP1L-204ENST00000548221 BAZ1AQ9NRL2 1556 aaPredicted RBP8.19□□□□□ -1.1
NCKAP1L-204ENST00000548221 IRX6P78412 446 aaPredicted RBP8.19□□□□□ -1.1
NCKAP1L-204ENST00000548221 SALL2Q9Y467 1007 aaPredicted RBP8.19□□□□□ -1.1
NCKAP1L-204ENST00000548221 UNC13AQ9UPW8 1703 aa8.18□□□□□ -1.1
NCKAP1L-204ENST00000548221 SENP3Q9H4L4 574 aaPredicted RBP8.18□□□□□ -1.1
NCKAP1L-204ENST00000548221 ARID3CA6NKF2 412 aa8.17□□□□□ -1.1
NCKAP1L-204ENST00000548221 RTL5Q5HYW3 569 aaPredicted RBP8.17□□□□□ -1.1
NCKAP1L-204ENST00000548221 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.17□□□□□ -1.1
NCKAP1L-204ENST00000548221 WRNQ14191 1432 aaPredicted RBP eCLIP8.17□□□□□ -1.1
NCKAP1L-204ENST00000548221 DDX10Q13206 875 aaKnown RBP8.16□□□□□ -1.1
NCKAP1L-204ENST00000548221 RUSC2Q8N2Y8 1516 aa8.15□□□□□ -1.11
NCKAP1L-204ENST00000548221 FANCIQ9NVI1 1328 aa8.14□□□□□ -1.11
NCKAP1L-204ENST00000548221 SLC24A1O60721 1099 aa8.14□□□□□ -1.11
NCKAP1L-204ENST00000548221 BICRAQ9NZM4 1560 aa8.13□□□□□ -1.11
NCKAP1L-204ENST00000548221 EIF5BO60841 1220 aaKnown RBP8.13□□□□□ -1.11
NCKAP1L-204ENST00000548221 CLIP1P30622 1438 aa8.12□□□□□ -1.11
NCKAP1L-204ENST00000548221 CNGB1Q14028 1251 aaPredicted RBP8.12□□□□□ -1.11
NCKAP1L-204ENST00000548221 BAZ1BQ9UIG0 1483 aaKnown RBP8.12□□□□□ -1.11
NCKAP1L-204ENST00000548221 TNIKQ9UKE5 1360 aa8.11□□□□□ -1.11
NCKAP1L-204ENST00000548221 ANP32CO43423 234 aa8.09□□□□□ -1.12
NCKAP1L-204ENST00000548221 NOP58Q9Y2X3 529 aaKnown RBP8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms