RNA–Protein interactions for RNA: ENST00000546769.1

PKP2-205, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-205ENST00000546769 AEBP2Q6ZN18 517 aaPredicted RBP28.39■■■□□ 2.14
PKP2-205ENST00000546769 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
PKP2-205ENST00000546769 SENP3Q9H4L4 574 aaPredicted RBP24.12■■□□□ 1.45
PKP2-205ENST00000546769 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
PKP2-205ENST00000546769 FOXD1Q16676 465 aa22.45■■□□□ 1.18
PKP2-205ENST00000546769 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
PKP2-205ENST00000546769 PPP6R1Q9UPN7 881 aa21.3■■□□□ 1
PKP2-205ENST00000546769 ADRA2BP18089 450 aa21.22■□□□□ 0.99
PKP2-205ENST00000546769 PIAS4Q8N2W9 510 aaPredicted RBP21.05■□□□□ 0.96
PKP2-205ENST00000546769 MSH5O43196 834 aa20.84■□□□□ 0.93
PKP2-205ENST00000546769 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
PKP2-205ENST00000546769 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
PKP2-205ENST00000546769 MAPK8IP2Q13387 824 aaPredicted RBP19.38■□□□□ 0.69
PKP2-205ENST00000546769 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
PKP2-205ENST00000546769 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
PKP2-205ENST00000546769 CNKSR2Q8WXI2 1034 aa18.87■□□□□ 0.61
PKP2-205ENST00000546769 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
PKP2-205ENST00000546769 HOXD11P31277 338 aaPredicted RBP18.66■□□□□ 0.58
PKP2-205ENST00000546769 RNF216Q9NWF9 866 aaPredicted RBP18.61■□□□□ 0.57
PKP2-205ENST00000546769 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
PKP2-205ENST00000546769 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
PKP2-205ENST00000546769 KCNA4P22459 653 aa18.43■□□□□ 0.54
PKP2-205ENST00000546769 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
PKP2-205ENST00000546769 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
PKP2-205ENST00000546769 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
PKP2-205ENST00000546769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
PKP2-205ENST00000546769 CACNB1Q02641 598 aaPredicted RBP17.62■□□□□ 0.41
PKP2-205ENST00000546769 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
PKP2-205ENST00000546769 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
PKP2-205ENST00000546769 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
PKP2-205ENST00000546769 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
PKP2-205ENST00000546769 ABCC9O60706 1549 aa17.28■□□□□ 0.36
PKP2-205ENST00000546769 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.32
PKP2-205ENST00000546769 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
PKP2-205ENST00000546769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
PKP2-205ENST00000546769 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
PKP2-205ENST00000546769 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
PKP2-205ENST00000546769 ZBTB22O15209 634 aa16.98■□□□□ 0.31
PKP2-205ENST00000546769 CAPN15O75808 1086 aa16.98■□□□□ 0.31
PKP2-205ENST00000546769 SAMD1Q6SPF0 538 aaPredicted RBP16.97■□□□□ 0.31
PKP2-205ENST00000546769 APLP2Q06481 763 aa16.95■□□□□ 0.3
PKP2-205ENST00000546769 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
PKP2-205ENST00000546769 DSG3P32926 999 aa16.83■□□□□ 0.28
PKP2-205ENST00000546769 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
PKP2-205ENST00000546769 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
PKP2-205ENST00000546769 ABCB7O75027 752 aa16.63■□□□□ 0.25
PKP2-205ENST00000546769 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
PKP2-205ENST00000546769 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
PKP2-205ENST00000546769 ATXN8OSP0DMR3 200 aa16.51■□□□□ 0.23
PKP2-205ENST00000546769 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
PKP2-205ENST00000546769 POLA2Q14181 598 aa16.45■□□□□ 0.22
PKP2-205ENST00000546769 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
PKP2-205ENST00000546769 ZBTB12Q9Y330 459 aaPredicted RBP16.15■□□□□ 0.18
PKP2-205ENST00000546769 NACADO15069 1562 aa16.09■□□□□ 0.17
PKP2-205ENST00000546769 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
PKP2-205ENST00000546769 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
PKP2-205ENST00000546769 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
PKP2-205ENST00000546769 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
PKP2-205ENST00000546769 FBLN2P98095 1184 aa15.9■□□□□ 0.14
PKP2-205ENST00000546769 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
PKP2-205ENST00000546769 BICRAQ9NZM4 1560 aa15.84■□□□□ 0.13
PKP2-205ENST00000546769 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
PKP2-205ENST00000546769 MYO15BQ96JP2 1530 aa15.76■□□□□ 0.11
PKP2-205ENST00000546769 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
PKP2-205ENST00000546769 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.1
PKP2-205ENST00000546769 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
PKP2-205ENST00000546769 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
PKP2-205ENST00000546769 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
PKP2-205ENST00000546769 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
PKP2-205ENST00000546769 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
PKP2-205ENST00000546769 DCAF8L2P0C7V8 631 aa15.62■□□□□ 0.09
PKP2-205ENST00000546769 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
PKP2-205ENST00000546769 SSUH2Q9Y2M2 353 aa15.56■□□□□ 0.08
PKP2-205ENST00000546769 ZNF692Q9BU19 519 aaPredicted RBP15.54■□□□□ 0.08
PKP2-205ENST00000546769 CHRDL2Q6WN34 429 aa15.53■□□□□ 0.08
PKP2-205ENST00000546769 POTEHQ6S545 545 aa15.51■□□□□ 0.07
PKP2-205ENST00000546769 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
PKP2-205ENST00000546769 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
PKP2-205ENST00000546769 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
PKP2-205ENST00000546769 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
PKP2-205ENST00000546769 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
PKP2-205ENST00000546769 CUX2O14529 1486 aa15.26■□□□□ 0.03
PKP2-205ENST00000546769 PIP4P2Q8N4L2 257 aa15.25■□□□□ 0.03
PKP2-205ENST00000546769 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
PKP2-205ENST00000546769 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
PKP2-205ENST00000546769 SCRIBQ14160 1630 aa15.23■□□□□ 0.03
PKP2-205ENST00000546769 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
PKP2-205ENST00000546769 PRR29P0C7W0 189 aa15.06■□□□□ 0
PKP2-205ENST00000546769 PROM2Q8N271 834 aa15.06■□□□□ 0
PKP2-205ENST00000546769 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
PKP2-205ENST00000546769 STAG3Q9UJ98 1225 aa15□□□□□ -0.01
PKP2-205ENST00000546769 ERCC6Q03468 1493 aa14.99□□□□□ -0.01
PKP2-205ENST00000546769 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
PKP2-205ENST00000546769 FKBP8Q14318 412 aa14.93□□□□□ -0.02
PKP2-205ENST00000546769 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
PKP2-205ENST00000546769 HAX1O00165 279 aa14.83□□□□□ -0.04
PKP2-205ENST00000546769 CREBZFQ9NS37 354 aa14.82□□□□□ -0.04
PKP2-205ENST00000546769 FARP1Q9Y4F1 1045 aaPredicted RBP14.77□□□□□ -0.05
PKP2-205ENST00000546769 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
PKP2-205ENST00000546769 THOC2Q8NI27 1593 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms