RNA–Protein interactions for RNA: ENST00000545303.5

TM7SF3-217, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 3

Gene TM7SF3, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-217ENST00000545303 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
TM7SF3-217ENST00000545303 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
TM7SF3-217ENST00000545303 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
TM7SF3-217ENST00000545303 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
TM7SF3-217ENST00000545303 FOXD1Q16676 465 aa17.94■□□□□ 0.46
TM7SF3-217ENST00000545303 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
TM7SF3-217ENST00000545303 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
TM7SF3-217ENST00000545303 MSH5O43196 834 aa17.13■□□□□ 0.33
TM7SF3-217ENST00000545303 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
TM7SF3-217ENST00000545303 ADRA2BP18089 450 aa16.86■□□□□ 0.29
TM7SF3-217ENST00000545303 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
TM7SF3-217ENST00000545303 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
TM7SF3-217ENST00000545303 MAPK8IP2Q13387 824 aaPredicted RBP15.39■□□□□ 0.05
TM7SF3-217ENST00000545303 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
TM7SF3-217ENST00000545303 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
TM7SF3-217ENST00000545303 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
TM7SF3-217ENST00000545303 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
TM7SF3-217ENST00000545303 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
TM7SF3-217ENST00000545303 KCNA4P22459 653 aa14.84□□□□□ -0.03
TM7SF3-217ENST00000545303 HOXD11P31277 338 aaPredicted RBP14.84□□□□□ -0.03
TM7SF3-217ENST00000545303 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
TM7SF3-217ENST00000545303 RNF216Q9NWF9 866 aaPredicted RBP14.79□□□□□ -0.04
TM7SF3-217ENST00000545303 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
TM7SF3-217ENST00000545303 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
TM7SF3-217ENST00000545303 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
TM7SF3-217ENST00000545303 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
TM7SF3-217ENST00000545303 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
TM7SF3-217ENST00000545303 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
TM7SF3-217ENST00000545303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
TM7SF3-217ENST00000545303 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
TM7SF3-217ENST00000545303 POTEHQ6S545 545 aa13.87□□□□□ -0.19
TM7SF3-217ENST00000545303 ABCC9O60706 1549 aa13.86□□□□□ -0.19
TM7SF3-217ENST00000545303 U3KPZ7 1027 aaPredicted RBP13.86□□□□□ -0.19
TM7SF3-217ENST00000545303 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
TM7SF3-217ENST00000545303 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
TM7SF3-217ENST00000545303 ZBTB22O15209 634 aa13.64□□□□□ -0.23
TM7SF3-217ENST00000545303 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
TM7SF3-217ENST00000545303 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
TM7SF3-217ENST00000545303 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
TM7SF3-217ENST00000545303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
TM7SF3-217ENST00000545303 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
TM7SF3-217ENST00000545303 CAPN15O75808 1086 aa13.52□□□□□ -0.25
TM7SF3-217ENST00000545303 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
TM7SF3-217ENST00000545303 APLP2Q06481 763 aa13.5□□□□□ -0.25
TM7SF3-217ENST00000545303 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
TM7SF3-217ENST00000545303 DSG3P32926 999 aa13.42□□□□□ -0.26
TM7SF3-217ENST00000545303 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
TM7SF3-217ENST00000545303 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
TM7SF3-217ENST00000545303 ABCB7O75027 752 aa13.23□□□□□ -0.29
TM7SF3-217ENST00000545303 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
TM7SF3-217ENST00000545303 RB1CC1Q8TDY2 1594 aa13.12□□□□□ -0.31
TM7SF3-217ENST00000545303 ATXN8OSP0DMR3 200 aa13.1□□□□□ -0.31
TM7SF3-217ENST00000545303 POLA2Q14181 598 aa13.06□□□□□ -0.32
TM7SF3-217ENST00000545303 NACADO15069 1562 aa13.02□□□□□ -0.33
TM7SF3-217ENST00000545303 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
TM7SF3-217ENST00000545303 DCAF8L2P0C7V8 631 aa12.85□□□□□ -0.35
TM7SF3-217ENST00000545303 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
TM7SF3-217ENST00000545303 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
TM7SF3-217ENST00000545303 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.36
TM7SF3-217ENST00000545303 UNC13AQ9UPW8 1703 aa12.81□□□□□ -0.36
TM7SF3-217ENST00000545303 CHRDL2Q6WN34 429 aa12.78□□□□□ -0.36
TM7SF3-217ENST00000545303 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.36
TM7SF3-217ENST00000545303 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
TM7SF3-217ENST00000545303 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
TM7SF3-217ENST00000545303 FBLN2P98095 1184 aa12.62□□□□□ -0.39
TM7SF3-217ENST00000545303 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
TM7SF3-217ENST00000545303 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
TM7SF3-217ENST00000545303 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
TM7SF3-217ENST00000545303 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
TM7SF3-217ENST00000545303 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
TM7SF3-217ENST00000545303 CC2D2AQ9P2K1 1620 aa12.52□□□□□ -0.4
TM7SF3-217ENST00000545303 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.41
TM7SF3-217ENST00000545303 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
TM7SF3-217ENST00000545303 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
TM7SF3-217ENST00000545303 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
TM7SF3-217ENST00000545303 EIF4G1Q04637 1599 aaKnown RBP12.46□□□□□ -0.42
TM7SF3-217ENST00000545303 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
TM7SF3-217ENST00000545303 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
TM7SF3-217ENST00000545303 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
TM7SF3-217ENST00000545303 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
TM7SF3-217ENST00000545303 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
TM7SF3-217ENST00000545303 HAX1O00165 279 aa12.32□□□□□ -0.44
TM7SF3-217ENST00000545303 FKBP8Q14318 412 aa12.31□□□□□ -0.44
TM7SF3-217ENST00000545303 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
TM7SF3-217ENST00000545303 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
TM7SF3-217ENST00000545303 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
TM7SF3-217ENST00000545303 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
TM7SF3-217ENST00000545303 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
TM7SF3-217ENST00000545303 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
TM7SF3-217ENST00000545303 CUX2O14529 1486 aa12.08□□□□□ -0.47
TM7SF3-217ENST00000545303 NCAPD3P42695 1498 aa12.06□□□□□ -0.48
TM7SF3-217ENST00000545303 EVX2Q03828 476 aa12.01□□□□□ -0.49
TM7SF3-217ENST00000545303 PROM2Q8N271 834 aa11.99□□□□□ -0.49
TM7SF3-217ENST00000545303 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
TM7SF3-217ENST00000545303 ERCC6Q03468 1493 aa11.96□□□□□ -0.49
TM7SF3-217ENST00000545303 PRR29P0C7W0 189 aa11.96□□□□□ -0.49
TM7SF3-217ENST00000545303 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
TM7SF3-217ENST00000545303 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
TM7SF3-217ENST00000545303 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
TM7SF3-217ENST00000545303 LHX8Q68G74 356 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms