RNA–Protein interactions for RNA: ENST00000543445.5

LDHA-221, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-221ENST00000543445 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
LDHA-221ENST00000543445 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
LDHA-221ENST00000543445 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
LDHA-221ENST00000543445 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
LDHA-221ENST00000543445 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
LDHA-221ENST00000543445 ADRA2BP18089 450 aa15.22■□□□□ 0.03
LDHA-221ENST00000543445 PPP6R1Q9UPN7 881 aa15.03■□□□□ -0
LDHA-221ENST00000543445 KCNA4P22459 653 aa15.01□□□□□ -0.01
LDHA-221ENST00000543445 FOXD1Q16676 465 aa14.98□□□□□ -0.01
LDHA-221ENST00000543445 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
LDHA-221ENST00000543445 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
LDHA-221ENST00000543445 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
LDHA-221ENST00000543445 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
LDHA-221ENST00000543445 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
LDHA-221ENST00000543445 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
LDHA-221ENST00000543445 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
LDHA-221ENST00000543445 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
LDHA-221ENST00000543445 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
LDHA-221ENST00000543445 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
LDHA-221ENST00000543445 ZBTB22O15209 634 aa13.8□□□□□ -0.2
LDHA-221ENST00000543445 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
LDHA-221ENST00000543445 MSH5O43196 834 aa13.53□□□□□ -0.24
LDHA-221ENST00000543445 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
LDHA-221ENST00000543445 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
LDHA-221ENST00000543445 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
LDHA-221ENST00000543445 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
LDHA-221ENST00000543445 AMER1Q5JTC6 1135 aaPredicted RBP13.26□□□□□ -0.29
LDHA-221ENST00000543445 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
LDHA-221ENST00000543445 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
LDHA-221ENST00000543445 ABCC9O60706 1549 aa13.22□□□□□ -0.29
LDHA-221ENST00000543445 HOXD11P31277 338 aaPredicted RBP13.13□□□□□ -0.31
LDHA-221ENST00000543445 CCDC180Q9P1Z9 1646 aa13.12□□□□□ -0.31
LDHA-221ENST00000543445 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
LDHA-221ENST00000543445 DMRT2Q9Y5R5 561 aa13.09□□□□□ -0.31
LDHA-221ENST00000543445 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
LDHA-221ENST00000543445 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
LDHA-221ENST00000543445 FKBP8Q14318 412 aa13□□□□□ -0.33
LDHA-221ENST00000543445 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
LDHA-221ENST00000543445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
LDHA-221ENST00000543445 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
LDHA-221ENST00000543445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.4
LDHA-221ENST00000543445 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
LDHA-221ENST00000543445 DCAF8L1A6NGE4 600 aa12.55□□□□□ -0.4
LDHA-221ENST00000543445 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.41
LDHA-221ENST00000543445 NACADO15069 1562 aa12.43□□□□□ -0.42
LDHA-221ENST00000543445 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
LDHA-221ENST00000543445 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
LDHA-221ENST00000543445 FBXO3Q9UK99 471 aa12.35□□□□□ -0.43
LDHA-221ENST00000543445 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
LDHA-221ENST00000543445 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
LDHA-221ENST00000543445 APLP2Q06481 763 aa12.27□□□□□ -0.45
LDHA-221ENST00000543445 MYO15BQ96JP2 1530 aa12.26□□□□□ -0.45
LDHA-221ENST00000543445 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
LDHA-221ENST00000543445 UNC13AQ9UPW8 1703 aa12.23□□□□□ -0.45
LDHA-221ENST00000543445 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
LDHA-221ENST00000543445 PLCB2Q00722 1185 aa12.2□□□□□ -0.46
LDHA-221ENST00000543445 ZCCHC6Q5VYS8 1495 aaKnown RBP12.14□□□□□ -0.47
LDHA-221ENST00000543445 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
LDHA-221ENST00000543445 PROM2Q8N271 834 aa12.09□□□□□ -0.47
LDHA-221ENST00000543445 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
LDHA-221ENST00000543445 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
LDHA-221ENST00000543445 FBLN2P98095 1184 aa12.06□□□□□ -0.48
LDHA-221ENST00000543445 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
LDHA-221ENST00000543445 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
LDHA-221ENST00000543445 SHROOM4Q9ULL8 1493 aa11.99□□□□□ -0.49
LDHA-221ENST00000543445 SCRIBQ14160 1630 aa11.98□□□□□ -0.49
LDHA-221ENST00000543445 TRHP20396 242 aaPredicted RBP11.92□□□□□ -0.5
LDHA-221ENST00000543445 BCANQ96GW7 911 aa11.92□□□□□ -0.5
LDHA-221ENST00000543445 CC2D2AQ9P2K1 1620 aa11.92□□□□□ -0.5
LDHA-221ENST00000543445 PKD2Q13563 968 aa11.91□□□□□ -0.5
LDHA-221ENST00000543445 POLA2Q14181 598 aa11.9□□□□□ -0.5
LDHA-221ENST00000543445 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
LDHA-221ENST00000543445 EIF4G1Q04637 1599 aaKnown RBP11.89□□□□□ -0.51
LDHA-221ENST00000543445 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
LDHA-221ENST00000543445 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
LDHA-221ENST00000543445 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
LDHA-221ENST00000543445 CAPN15O75808 1086 aa11.79□□□□□ -0.52
LDHA-221ENST00000543445 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
LDHA-221ENST00000543445 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
LDHA-221ENST00000543445 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
LDHA-221ENST00000543445 BBXQ8WY36 941 aaPredicted RBP11.76□□□□□ -0.53
LDHA-221ENST00000543445 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
LDHA-221ENST00000543445 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
LDHA-221ENST00000543445 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
LDHA-221ENST00000543445 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
LDHA-221ENST00000543445 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
LDHA-221ENST00000543445 STAG3Q9UJ98 1225 aa11.67□□□□□ -0.54
LDHA-221ENST00000543445 RNF39Q9H2S5 420 aa11.64□□□□□ -0.55
LDHA-221ENST00000543445 KDM2AQ9Y2K7 1162 aa11.64□□□□□ -0.55
LDHA-221ENST00000543445 NPM1P06748 294 aaKnown RBP eCLIP11.63□□□□□ -0.55
LDHA-221ENST00000543445 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
LDHA-221ENST00000543445 ABCB7O75027 752 aa11.61□□□□□ -0.55
LDHA-221ENST00000543445 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
LDHA-221ENST00000543445 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
LDHA-221ENST00000543445 SPRYD3Q8NCJ5 442 aa11.58□□□□□ -0.56
LDHA-221ENST00000543445 TPRNQ4KMQ1 711 aa11.57□□□□□ -0.56
LDHA-221ENST00000543445 RGL2O15211 777 aa11.56□□□□□ -0.56
LDHA-221ENST00000543445 MIER1Q8N108 512 aa11.55□□□□□ -0.56
LDHA-221ENST00000543445 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
LDHA-221ENST00000543445 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms