RNA–Protein interactions for RNA: ENST00000542394.5

HELB-204, Transcript of DNA helicase B, humanhuman

TSL 1 (best)

Gene HELB, Length 3,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELB-204ENST00000542394 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
HELB-204ENST00000542394 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.47
HELB-204ENST00000542394 MYT1Q01538 1121 aa17.74■□□□□ 0.43
HELB-204ENST00000542394 PRKCSHP14314 528 aaPredicted RBP17.14■□□□□ 0.33
HELB-204ENST00000542394 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
HELB-204ENST00000542394 CCDC180Q9P1Z9 1646 aa16.84■□□□□ 0.29
HELB-204ENST00000542394 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
HELB-204ENST00000542394 ERICH6Q7L0X2 663 aa16.57■□□□□ 0.24
HELB-204ENST00000542394 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
HELB-204ENST00000542394 APLP2Q06481 763 aa16.55■□□□□ 0.24
HELB-204ENST00000542394 HRCP23327 699 aa16.44■□□□□ 0.22
HELB-204ENST00000542394 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
HELB-204ENST00000542394 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
HELB-204ENST00000542394 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
HELB-204ENST00000542394 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
HELB-204ENST00000542394 DCAF1Q9Y4B6 1507 aa16.13■□□□□ 0.17
HELB-204ENST00000542394 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
HELB-204ENST00000542394 SHROOM4Q9ULL8 1493 aa15.89■□□□□ 0.13
HELB-204ENST00000542394 CENPBP07199 599 aaPredicted RBP15.82■□□□□ 0.12
HELB-204ENST00000542394 MYO15BQ96JP2 1530 aa15.8■□□□□ 0.12
HELB-204ENST00000542394 EIF5BO60841 1220 aaKnown RBP15.74■□□□□ 0.11
HELB-204ENST00000542394 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
HELB-204ENST00000542394 GTF3C3Q9Y5Q9 886 aa15.56■□□□□ 0.08
HELB-204ENST00000542394 ACIN1Q9UKV3 1341 aaKnown RBP15.54■□□□□ 0.08
HELB-204ENST00000542394 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.07
HELB-204ENST00000542394 NACADO15069 1562 aa15.5■□□□□ 0.07
HELB-204ENST00000542394 ANP32EQ9BTT0 268 aa15.49■□□□□ 0.07
HELB-204ENST00000542394 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
HELB-204ENST00000542394 ABCC9O60706 1549 aa15.47■□□□□ 0.07
HELB-204ENST00000542394 NEUROD1Q13562 356 aa15.46■□□□□ 0.07
HELB-204ENST00000542394 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
HELB-204ENST00000542394 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
HELB-204ENST00000542394 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
HELB-204ENST00000542394 ANO8Q9HCE9 1232 aaPredicted RBP15.41■□□□□ 0.06
HELB-204ENST00000542394 UBE2Q2Q8WVN8 375 aa15.26■□□□□ 0.03
HELB-204ENST00000542394 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
HELB-204ENST00000542394 PODXL2Q9NZ53 605 aa15.2■□□□□ 0.02
HELB-204ENST00000542394 RSF1Q96T23 1441 aaPredicted RBP15.19■□□□□ 0.02
HELB-204ENST00000542394 UNC13AQ9UPW8 1703 aa15.16■□□□□ 0.02
HELB-204ENST00000542394 CHIC1Q5VXU3 224 aa15.11■□□□□ 0.01
HELB-204ENST00000542394 CCDC136Q96JN2 1154 aa15.05■□□□□ -0
HELB-204ENST00000542394 PKNOX2Q96KN3 472 aa15.04■□□□□ -0
HELB-204ENST00000542394 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
HELB-204ENST00000542394 MROH2BQ7Z745 1585 aa15.02□□□□□ -0.01
HELB-204ENST00000542394 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
HELB-204ENST00000542394 ZEB1P37275 1124 aaPredicted RBP14.99□□□□□ -0.01
HELB-204ENST00000542394 WIZO95785 1651 aa14.94□□□□□ -0.02
HELB-204ENST00000542394 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
HELB-204ENST00000542394 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
HELB-204ENST00000542394 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
HELB-204ENST00000542394 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
HELB-204ENST00000542394 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
HELB-204ENST00000542394 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
HELB-204ENST00000542394 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
HELB-204ENST00000542394 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
HELB-204ENST00000542394 TSHZ2Q9NRE2 1034 aa14.74□□□□□ -0.05
HELB-204ENST00000542394 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.73□□□□□ -0.05
HELB-204ENST00000542394 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
HELB-204ENST00000542394 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
HELB-204ENST00000542394 PDE4CQ08493 712 aa14.6□□□□□ -0.07
HELB-204ENST00000542394 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
HELB-204ENST00000542394 PDIA4P13667 645 aaKnown RBP14.59□□□□□ -0.07
HELB-204ENST00000542394 YTHDC1Q96MU7 727 aaKnown RBP14.58□□□□□ -0.08
HELB-204ENST00000542394 NEFLP07196 543 aa14.57□□□□□ -0.08
HELB-204ENST00000542394 ERICH6BQ5W0A0 696 aa14.54□□□□□ -0.08
HELB-204ENST00000542394 A0A0U1RQG5 324 aaPredicted RBP14.51□□□□□ -0.09
HELB-204ENST00000542394 RANGAP1P46060 587 aaPredicted RBP14.51□□□□□ -0.09
HELB-204ENST00000542394 DEKP35659 375 aaKnown RBP14.5□□□□□ -0.09
HELB-204ENST00000542394 LOC105371045A0A1W2PR82 267 aa14.49□□□□□ -0.09
HELB-204ENST00000542394 DIEXFQ68CQ4 756 aaKnown RBP14.49□□□□□ -0.09
HELB-204ENST00000542394 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
HELB-204ENST00000542394 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
HELB-204ENST00000542394 ATAD2BQ9ULI0 1458 aa14.47□□□□□ -0.09
HELB-204ENST00000542394 TRIM26Q12899 539 aaPredicted RBP14.46□□□□□ -0.09
HELB-204ENST00000542394 BCL11BQ9C0K0 894 aaPredicted RBP14.45□□□□□ -0.1
HELB-204ENST00000542394 TIMELESSQ9UNS1 1208 aa14.42□□□□□ -0.1
HELB-204ENST00000542394 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
HELB-204ENST00000542394 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
HELB-204ENST00000542394 RTN4Q9NQC3 1192 aaKnown RBP14.4□□□□□ -0.1
HELB-204ENST00000542394 FGD1P98174 961 aa14.39□□□□□ -0.11
HELB-204ENST00000542394 SUPT16HQ9Y5B9 1047 aaKnown RBP14.39□□□□□ -0.11
HELB-204ENST00000542394 ARXQ96QS3 562 aa14.37□□□□□ -0.11
HELB-204ENST00000542394 HMGXB3Q12766 1538 aa14.35□□□□□ -0.11
HELB-204ENST00000542394 BAZ1BQ9UIG0 1483 aaKnown RBP14.35□□□□□ -0.11
HELB-204ENST00000542394 ZMYND15Q9H091 742 aa14.32□□□□□ -0.12
HELB-204ENST00000542394 MYT1LQ9UL68 1186 aa14.32□□□□□ -0.12
HELB-204ENST00000542394 IL27Q8NEV9 243 aa14.3□□□□□ -0.12
HELB-204ENST00000542394 NCAPD3P42695 1498 aa14.3□□□□□ -0.12
HELB-204ENST00000542394 MSH5O43196 834 aa14.29□□□□□ -0.12
HELB-204ENST00000542394 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
HELB-204ENST00000542394 AAMPQ13685 434 aa14.25□□□□□ -0.13
HELB-204ENST00000542394 RBM19Q9Y4C8 960 aaKnown RBP14.25□□□□□ -0.13
HELB-204ENST00000542394 RBM10P98175 930 aaKnown RBP14.24□□□□□ -0.13
HELB-204ENST00000542394 VSIG10Q8N0Z9 540 aa14.24□□□□□ -0.13
HELB-204ENST00000542394 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
HELB-204ENST00000542394 EEA1Q15075 1411 aa14.22□□□□□ -0.13
HELB-204ENST00000542394 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
HELB-204ENST00000542394 BIVM-ERCC5R4GMW8 1640 aa14.2□□□□□ -0.14
HELB-204ENST00000542394 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
HELB-204ENST00000542394 SOGA1O94964 1423 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms