RNA–Protein interactions for RNA: ENST00000533506.5

LINC01588-205, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 1 (best)

Gene LINC01588, Length 1,316 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-205ENST00000533506 AEBP2Q6ZN18 517 aaPredicted RBP29.19■■■□□ 2.26
LINC01588-205ENST00000533506 CHIC1Q5VXU3 224 aa27.17■■□□□ 1.94
LINC01588-205ENST00000533506 SENP3Q9H4L4 574 aaPredicted RBP25.08■■□□□ 1.6
LINC01588-205ENST00000533506 POTEDQ86YR6 584 aa24.55■■□□□ 1.52
LINC01588-205ENST00000533506 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
LINC01588-205ENST00000533506 FOXD1Q16676 465 aa23.58■■□□□ 1.36
LINC01588-205ENST00000533506 MSH5O43196 834 aa22.58■■□□□ 1.21
LINC01588-205ENST00000533506 PIAS4Q8N2W9 510 aaPredicted RBP21.63■■□□□ 1.05
LINC01588-205ENST00000533506 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
LINC01588-205ENST00000533506 ADRA2BP18089 450 aa20.75■□□□□ 0.91
LINC01588-205ENST00000533506 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
LINC01588-205ENST00000533506 CACNB1Q02641 598 aaPredicted RBP20.24■□□□□ 0.83
LINC01588-205ENST00000533506 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
LINC01588-205ENST00000533506 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
LINC01588-205ENST00000533506 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
LINC01588-205ENST00000533506 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
LINC01588-205ENST00000533506 POTEHQ6S545 545 aa18.94■□□□□ 0.62
LINC01588-205ENST00000533506 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
LINC01588-205ENST00000533506 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
LINC01588-205ENST00000533506 HOXD11P31277 338 aaPredicted RBP18.41■□□□□ 0.54
LINC01588-205ENST00000533506 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.49
LINC01588-205ENST00000533506 NISCHQ9Y2I1 1504 aa17.98■□□□□ 0.47
LINC01588-205ENST00000533506 RNF216Q9NWF9 866 aaPredicted RBP17.85■□□□□ 0.45
LINC01588-205ENST00000533506 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
LINC01588-205ENST00000533506 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
LINC01588-205ENST00000533506 DSG3P32926 999 aa17.47■□□□□ 0.39
LINC01588-205ENST00000533506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
LINC01588-205ENST00000533506 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
LINC01588-205ENST00000533506 CAPN15O75808 1086 aa17.15■□□□□ 0.34
LINC01588-205ENST00000533506 SP7Q8TDD2 431 aaPredicted RBP17.07■□□□□ 0.32
LINC01588-205ENST00000533506 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
LINC01588-205ENST00000533506 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
LINC01588-205ENST00000533506 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
LINC01588-205ENST00000533506 ABCB7O75027 752 aa16.64■□□□□ 0.25
LINC01588-205ENST00000533506 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
LINC01588-205ENST00000533506 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
LINC01588-205ENST00000533506 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
LINC01588-205ENST00000533506 APLP2Q06481 763 aa16.28■□□□□ 0.2
LINC01588-205ENST00000533506 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
LINC01588-205ENST00000533506 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
LINC01588-205ENST00000533506 HAX1O00165 279 aa16.23■□□□□ 0.19
LINC01588-205ENST00000533506 ABCC9O60706 1549 aa16.22■□□□□ 0.19
LINC01588-205ENST00000533506 PIP4P2Q8N4L2 257 aa16.19■□□□□ 0.18
LINC01588-205ENST00000533506 PLSCR2Q9NRY7 297 aa16.14■□□□□ 0.17
LINC01588-205ENST00000533506 EVX2Q03828 476 aa15.99■□□□□ 0.15
LINC01588-205ENST00000533506 AKT1S1Q96B36 256 aa15.98■□□□□ 0.15
LINC01588-205ENST00000533506 LHX8Q68G74 356 aa15.97■□□□□ 0.15
LINC01588-205ENST00000533506 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
LINC01588-205ENST00000533506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
LINC01588-205ENST00000533506 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
LINC01588-205ENST00000533506 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC01588-205ENST00000533506 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
LINC01588-205ENST00000533506 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
LINC01588-205ENST00000533506 POLA2Q14181 598 aa15.77■□□□□ 0.12
LINC01588-205ENST00000533506 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
LINC01588-205ENST00000533506 GABBR2O75899 941 aa15.53■□□□□ 0.08
LINC01588-205ENST00000533506 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
LINC01588-205ENST00000533506 C19orf67A6NJJ6 358 aa15.42■□□□□ 0.06
LINC01588-205ENST00000533506 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
LINC01588-205ENST00000533506 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
LINC01588-205ENST00000533506 NACADO15069 1562 aa15.31■□□□□ 0.04
LINC01588-205ENST00000533506 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
LINC01588-205ENST00000533506 POTEIP0CG38 1075 aa15.22■□□□□ 0.03
LINC01588-205ENST00000533506 UNC13AQ9UPW8 1703 aa15.15■□□□□ 0.02
LINC01588-205ENST00000533506 POTEMA6NI47 508 aa15.12■□□□□ 0.01
LINC01588-205ENST00000533506 MYO15BQ96JP2 1530 aa15.08■□□□□ 0.01
LINC01588-205ENST00000533506 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
LINC01588-205ENST00000533506 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
LINC01588-205ENST00000533506 POTEGQ6S5H5 508 aa15.02■□□□□ -0
LINC01588-205ENST00000533506 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
LINC01588-205ENST00000533506 BICRAQ9NZM4 1560 aa15□□□□□ -0.01
LINC01588-205ENST00000533506 PCDH10Q9P2E7 1040 aa14.95□□□□□ -0.02
LINC01588-205ENST00000533506 OTUD5Q96G74 571 aa14.92□□□□□ -0.02
LINC01588-205ENST00000533506 ZCCHC6Q5VYS8 1495 aaKnown RBP14.92□□□□□ -0.02
LINC01588-205ENST00000533506 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
LINC01588-205ENST00000533506 ATF5Q9Y2D1 282 aaPredicted RBP14.87□□□□□ -0.03
LINC01588-205ENST00000533506 CLEC11AQ9Y240 323 aa14.86□□□□□ -0.03
LINC01588-205ENST00000533506 SPDYE1Q8NFV5 336 aaPredicted RBP14.84□□□□□ -0.03
LINC01588-205ENST00000533506 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
LINC01588-205ENST00000533506 CLCN6P51797 869 aa14.77□□□□□ -0.04
LINC01588-205ENST00000533506 CHADLQ6NUI6 762 aa14.77□□□□□ -0.04
LINC01588-205ENST00000533506 SCRIBQ14160 1630 aa14.77□□□□□ -0.05
LINC01588-205ENST00000533506 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
LINC01588-205ENST00000533506 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
LINC01588-205ENST00000533506 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
LINC01588-205ENST00000533506 DCBLD2Q96PD2 775 aa14.75□□□□□ -0.05
LINC01588-205ENST00000533506 POTEB2H3BUK9 544 aa14.69□□□□□ -0.06
LINC01588-205ENST00000533506 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
LINC01588-205ENST00000533506 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
LINC01588-205ENST00000533506 KCNA4P22459 653 aa14.66□□□□□ -0.06
LINC01588-205ENST00000533506 EIF4G1Q04637 1599 aaKnown RBP14.64□□□□□ -0.07
LINC01588-205ENST00000533506 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
LINC01588-205ENST00000533506 LCE2DQ5TA82 110 aaPredicted RBP14.5□□□□□ -0.09
LINC01588-205ENST00000533506 SSUH2Q9Y2M2 353 aa14.43□□□□□ -0.1
LINC01588-205ENST00000533506 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
LINC01588-205ENST00000533506 ZNF579Q8NAF0 562 aaKnown RBP14.41□□□□□ -0.1
LINC01588-205ENST00000533506 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
LINC01588-205ENST00000533506 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
LINC01588-205ENST00000533506 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
LINC01588-205ENST00000533506 FBLN2P98095 1184 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms