RNA–Protein interactions for RNA: ENST00000533409.1

MS4A6A-218, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 3

Gene MS4A6A, Length 682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-218ENST00000533409 AEBP2Q6ZN18 517 aaPredicted RBP11.95□□□□□ -0.5
MS4A6A-218ENST00000533409 CHIC1Q5VXU3 224 aa11.32□□□□□ -0.6
MS4A6A-218ENST00000533409 SENP3Q9H4L4 574 aaPredicted RBP10.44□□□□□ -0.74
MS4A6A-218ENST00000533409 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
MS4A6A-218ENST00000533409 PHF23Q9BUL5 403 aaPredicted RBP10.14□□□□□ -0.79
MS4A6A-218ENST00000533409 FOXD1Q16676 465 aa9.67□□□□□ -0.86
MS4A6A-218ENST00000533409 MSH5O43196 834 aa9.38□□□□□ -0.91
MS4A6A-218ENST00000533409 PIAS4Q8N2W9 510 aaPredicted RBP8.95□□□□□ -0.98
MS4A6A-218ENST00000533409 SLC24A1O60721 1099 aa8.77□□□□□ -1.01
MS4A6A-218ENST00000533409 EHMT2Q96KQ7 1210 aa8.69□□□□□ -1.02
MS4A6A-218ENST00000533409 PPP6R1Q9UPN7 881 aa8.6□□□□□ -1.03
MS4A6A-218ENST00000533409 PLPPR3Q6T4P5 718 aa8.59□□□□□ -1.03
MS4A6A-218ENST00000533409 NISCHQ9Y2I1 1504 aa8.59□□□□□ -1.03
MS4A6A-218ENST00000533409 ADRA2BP18089 450 aa8.56□□□□□ -1.04
MS4A6A-218ENST00000533409 KCNA4P22459 653 aa8.29□□□□□ -1.08
MS4A6A-218ENST00000533409 CACNB1Q02641 598 aaPredicted RBP8.28□□□□□ -1.08
MS4A6A-218ENST00000533409 CSRNP3Q8WYN3 585 aa8.27□□□□□ -1.09
MS4A6A-218ENST00000533409 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
MS4A6A-218ENST00000533409 DMRT2Q9Y5R5 561 aa8.16□□□□□ -1.1
MS4A6A-218ENST00000533409 AMER1Q5JTC6 1135 aaPredicted RBP8.12□□□□□ -1.11
MS4A6A-218ENST00000533409 SCAF1Q9H7N4 1312 aaKnown RBP8.03□□□□□ -1.12
MS4A6A-218ENST00000533409 SLC4A1APQ9BWU0 796 aaKnown RBP7.99□□□□□ -1.13
MS4A6A-218ENST00000533409 MAPK8IP2Q13387 824 aaPredicted RBP7.98□□□□□ -1.13
MS4A6A-218ENST00000533409 RNF39Q9H2S5 420 aa7.9□□□□□ -1.14
MS4A6A-218ENST00000533409 NCBP3Q53F19 620 aaKnown RBP7.86□□□□□ -1.15
MS4A6A-218ENST00000533409 POTEHQ6S545 545 aa7.86□□□□□ -1.15
MS4A6A-218ENST00000533409 C1QBPQ07021 282 aaKnown RBP7.82□□□□□ -1.16
MS4A6A-218ENST00000533409 DCAF8L1A6NGE4 600 aa7.77□□□□□ -1.17
MS4A6A-218ENST00000533409 ZBTB22O15209 634 aa7.71□□□□□ -1.18
MS4A6A-218ENST00000533409 HOXD11P31277 338 aaPredicted RBP7.69□□□□□ -1.18
MS4A6A-218ENST00000533409 DNAJC5BQ9UF47 199 aa7.66□□□□□ -1.18
MS4A6A-218ENST00000533409 DAXXQ9UER7 740 aaPredicted RBP7.65□□□□□ -1.18
MS4A6A-218ENST00000533409 PRKCSHP14314 528 aaPredicted RBP7.59□□□□□ -1.19
MS4A6A-218ENST00000533409 CCDC180Q9P1Z9 1646 aa7.57□□□□□ -1.2
MS4A6A-218ENST00000533409 PPP4R3CPQ6ZMV5 832 aa7.52□□□□□ -1.21
MS4A6A-218ENST00000533409 RNF216Q9NWF9 866 aaPredicted RBP7.51□□□□□ -1.21
MS4A6A-218ENST00000533409 TAOK2Q9UL54 1235 aa7.49□□□□□ -1.21
MS4A6A-218ENST00000533409 NPM3O75607 178 aaKnown RBP7.48□□□□□ -1.21
MS4A6A-218ENST00000533409 PLCB2Q00722 1185 aa7.46□□□□□ -1.22
MS4A6A-218ENST00000533409 BCANQ96GW7 911 aa7.46□□□□□ -1.22
MS4A6A-218ENST00000533409 CNKSR2Q8WXI2 1034 aa7.44□□□□□ -1.22
MS4A6A-218ENST00000533409 ARXQ96QS3 562 aa7.41□□□□□ -1.22
MS4A6A-218ENST00000533409 TIMELESSQ9UNS1 1208 aa7.38□□□□□ -1.23
MS4A6A-218ENST00000533409 FKBP8Q14318 412 aa7.37□□□□□ -1.23
MS4A6A-218ENST00000533409 FOXD4L1Q9NU39 408 aa7.37□□□□□ -1.23
MS4A6A-218ENST00000533409 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
MS4A6A-218ENST00000533409 HAP1P54257 671 aaPredicted RBP7.29□□□□□ -1.24
MS4A6A-218ENST00000533409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.29□□□□□ -1.24
MS4A6A-218ENST00000533409 TULP1O00294 542 aaPredicted RBP7.26□□□□□ -1.25
MS4A6A-218ENST00000533409 VSIG10Q8N0Z9 540 aa7.23□□□□□ -1.25
MS4A6A-218ENST00000533409 DCAF8L2P0C7V8 631 aa7.21□□□□□ -1.26
MS4A6A-218ENST00000533409 ABCC9O60706 1549 aa7.21□□□□□ -1.26
MS4A6A-218ENST00000533409 DSG3P32926 999 aa7.2□□□□□ -1.26
MS4A6A-218ENST00000533409 MYO15BQ96JP2 1530 aa7.17□□□□□ -1.26
MS4A6A-218ENST00000533409 DCAF1Q9Y4B6 1507 aa7.17□□□□□ -1.26
MS4A6A-218ENST00000533409 HOMEZQ8IX15 550 aa7.17□□□□□ -1.26
MS4A6A-218ENST00000533409 ZCCHC6Q5VYS8 1495 aaKnown RBP7.16□□□□□ -1.26
MS4A6A-218ENST00000533409 NACADO15069 1562 aa7.14□□□□□ -1.27
MS4A6A-218ENST00000533409 GTF3C3Q9Y5Q9 886 aa7.12□□□□□ -1.27
MS4A6A-218ENST00000533409 CAPN15O75808 1086 aa7.11□□□□□ -1.27
MS4A6A-218ENST00000533409 KDM2AQ9Y2K7 1162 aa7.11□□□□□ -1.27
MS4A6A-218ENST00000533409 RB1CC1Q8TDY2 1594 aa7.09□□□□□ -1.27
MS4A6A-218ENST00000533409 ERICH6Q7L0X2 663 aa7.09□□□□□ -1.27
MS4A6A-218ENST00000533409 SPINK5Q9NQ38 1064 aaPredicted RBP7.04□□□□□ -1.28
MS4A6A-218ENST00000533409 U3KPZ7 1027 aaPredicted RBP7.04□□□□□ -1.28
MS4A6A-218ENST00000533409 ATXN8OSP0DMR3 200 aa7.03□□□□□ -1.28
MS4A6A-218ENST00000533409 FBLN2P98095 1184 aa7.03□□□□□ -1.28
MS4A6A-218ENST00000533409 TMEM132AQ24JP5 1023 aa7.02□□□□□ -1.29
MS4A6A-218ENST00000533409 RBM42Q9BTD8 480 aaKnown RBP7.01□□□□□ -1.29
MS4A6A-218ENST00000533409 APLP2Q06481 763 aa7□□□□□ -1.29
MS4A6A-218ENST00000533409 SP7Q8TDD2 431 aaPredicted RBP6.99□□□□□ -1.29
MS4A6A-218ENST00000533409 RANGAP1P46060 587 aaPredicted RBP6.97□□□□□ -1.29
MS4A6A-218ENST00000533409 CHRDL2Q6WN34 429 aa6.96□□□□□ -1.3
MS4A6A-218ENST00000533409 ZNF219Q9P2Y4 722 aaPredicted RBP6.94□□□□□ -1.3
MS4A6A-218ENST00000533409 PODXL2Q9NZ53 605 aa6.92□□□□□ -1.3
MS4A6A-218ENST00000533409 SLC4A2P04920 1241 aa6.9□□□□□ -1.3
MS4A6A-218ENST00000533409 C14orf37Q86TY3 774 aa6.9□□□□□ -1.3
MS4A6A-218ENST00000533409 PKD2Q13563 968 aa6.89□□□□□ -1.31
MS4A6A-218ENST00000533409 SHROOM4Q9ULL8 1493 aa6.89□□□□□ -1.31
MS4A6A-218ENST00000533409 BBXQ8WY36 941 aaPredicted RBP6.87□□□□□ -1.31
MS4A6A-218ENST00000533409 MYCNP04198 464 aaPredicted RBP6.86□□□□□ -1.31
MS4A6A-218ENST00000533409 SCRIBQ14160 1630 aa6.84□□□□□ -1.31
MS4A6A-218ENST00000533409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.84□□□□□ -1.31
MS4A6A-218ENST00000533409 TRHP20396 242 aaPredicted RBP6.84□□□□□ -1.31
MS4A6A-218ENST00000533409 HNRNPUL2Q1KMD3 747 aaKnown RBP6.84□□□□□ -1.31
MS4A6A-218ENST00000533409 DNAJC5Q9H3Z4 198 aa6.84□□□□□ -1.31
MS4A6A-218ENST00000533409 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.84□□□□□ -1.31
MS4A6A-218ENST00000533409 PAXIP1Q6ZW49 1069 aaPredicted RBP6.83□□□□□ -1.32
MS4A6A-218ENST00000533409 FBXO3Q9UK99 471 aa6.83□□□□□ -1.32
MS4A6A-218ENST00000533409 ABCB7O75027 752 aa6.82□□□□□ -1.32
MS4A6A-218ENST00000533409 PLSCR2Q9NRY7 297 aa6.82□□□□□ -1.32
MS4A6A-218ENST00000533409 NPM1P06748 294 aaKnown RBP eCLIP6.81□□□□□ -1.32
MS4A6A-218ENST00000533409 TSHZ2Q9NRE2 1034 aa6.81□□□□□ -1.32
MS4A6A-218ENST00000533409 NBR1Q14596 966 aa6.8□□□□□ -1.32
MS4A6A-218ENST00000533409 KLHL34Q8N239 644 aa6.8□□□□□ -1.32
MS4A6A-218ENST00000533409 VASPP50552 380 aaPredicted RBP6.79□□□□□ -1.32
MS4A6A-218ENST00000533409 PABPN1Q86U42 306 aaKnown RBP eCLIP6.79□□□□□ -1.32
MS4A6A-218ENST00000533409 CFAP44Q96MT7 982 aa6.79□□□□□ -1.32
MS4A6A-218ENST00000533409 IFNLR1Q8IU57 520 aaPredicted RBP6.78□□□□□ -1.32
MS4A6A-218ENST00000533409 UNC13AQ9UPW8 1703 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms