RNA–Protein interactions for RNA: ENST00000533302.5

TRIM29-220, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-220ENST00000533302 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
TRIM29-220ENST00000533302 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
TRIM29-220ENST00000533302 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
TRIM29-220ENST00000533302 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
TRIM29-220ENST00000533302 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
TRIM29-220ENST00000533302 FOXD1Q16676 465 aa14.64□□□□□ -0.07
TRIM29-220ENST00000533302 PPP6R1Q9UPN7 881 aa14.44□□□□□ -0.1
TRIM29-220ENST00000533302 ADRA2BP18089 450 aa14.43□□□□□ -0.1
TRIM29-220ENST00000533302 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
TRIM29-220ENST00000533302 KCNA4P22459 653 aa13.75□□□□□ -0.21
TRIM29-220ENST00000533302 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
TRIM29-220ENST00000533302 MSH5O43196 834 aa13.27□□□□□ -0.29
TRIM29-220ENST00000533302 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
TRIM29-220ENST00000533302 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
TRIM29-220ENST00000533302 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
TRIM29-220ENST00000533302 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
TRIM29-220ENST00000533302 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
TRIM29-220ENST00000533302 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
TRIM29-220ENST00000533302 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
TRIM29-220ENST00000533302 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
TRIM29-220ENST00000533302 NISCHQ9Y2I1 1504 aa12.73□□□□□ -0.37
TRIM29-220ENST00000533302 RNF216Q9NWF9 866 aaPredicted RBP12.72□□□□□ -0.37
TRIM29-220ENST00000533302 ZBTB22O15209 634 aa12.69□□□□□ -0.38
TRIM29-220ENST00000533302 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
TRIM29-220ENST00000533302 DMRT2Q9Y5R5 561 aa12.68□□□□□ -0.38
TRIM29-220ENST00000533302 HOXD11P31277 338 aaPredicted RBP12.58□□□□□ -0.4
TRIM29-220ENST00000533302 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
TRIM29-220ENST00000533302 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
TRIM29-220ENST00000533302 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
TRIM29-220ENST00000533302 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
TRIM29-220ENST00000533302 ATXN8OSP0DMR3 200 aa11.99□□□□□ -0.49
TRIM29-220ENST00000533302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRIM29-220ENST00000533302 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
TRIM29-220ENST00000533302 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
TRIM29-220ENST00000533302 ABCC9O60706 1549 aa11.77□□□□□ -0.52
TRIM29-220ENST00000533302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
TRIM29-220ENST00000533302 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
TRIM29-220ENST00000533302 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
TRIM29-220ENST00000533302 FKBP8Q14318 412 aa11.64□□□□□ -0.55
TRIM29-220ENST00000533302 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
TRIM29-220ENST00000533302 APLP2Q06481 763 aa11.52□□□□□ -0.57
TRIM29-220ENST00000533302 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
TRIM29-220ENST00000533302 POTEDQ86YR6 584 aa11.42□□□□□ -0.58
TRIM29-220ENST00000533302 SPINK5Q9NQ38 1064 aaPredicted RBP11.42□□□□□ -0.58
TRIM29-220ENST00000533302 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
TRIM29-220ENST00000533302 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
TRIM29-220ENST00000533302 CCDC180Q9P1Z9 1646 aa11.34□□□□□ -0.59
TRIM29-220ENST00000533302 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
TRIM29-220ENST00000533302 CAPN15O75808 1086 aa11.31□□□□□ -0.6
TRIM29-220ENST00000533302 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
TRIM29-220ENST00000533302 POLA2Q14181 598 aa11.28□□□□□ -0.6
TRIM29-220ENST00000533302 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
TRIM29-220ENST00000533302 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
TRIM29-220ENST00000533302 FBLN2P98095 1184 aa11.2□□□□□ -0.62
TRIM29-220ENST00000533302 ABCB7O75027 752 aa11.16□□□□□ -0.62
TRIM29-220ENST00000533302 PROM2Q8N271 834 aa11.12□□□□□ -0.63
TRIM29-220ENST00000533302 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
TRIM29-220ENST00000533302 DSG3P32926 999 aa11.05□□□□□ -0.64
TRIM29-220ENST00000533302 FBXO3Q9UK99 471 aa11.05□□□□□ -0.64
TRIM29-220ENST00000533302 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRIM29-220ENST00000533302 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
TRIM29-220ENST00000533302 DCAF8L2P0C7V8 631 aa11.01□□□□□ -0.65
TRIM29-220ENST00000533302 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
TRIM29-220ENST00000533302 NACADO15069 1562 aa10.92□□□□□ -0.66
TRIM29-220ENST00000533302 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
TRIM29-220ENST00000533302 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
TRIM29-220ENST00000533302 ZNF692Q9BU19 519 aaPredicted RBP10.86□□□□□ -0.67
TRIM29-220ENST00000533302 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
TRIM29-220ENST00000533302 SPDYE2BA6NHP3 402 aa10.83□□□□□ -0.68
TRIM29-220ENST00000533302 SPDYE6P0CI01 402 aa10.83□□□□□ -0.68
TRIM29-220ENST00000533302 CACNB1Q02641 598 aaPredicted RBP10.83□□□□□ -0.68
TRIM29-220ENST00000533302 SPDYE2Q495Y8 402 aa10.83□□□□□ -0.68
TRIM29-220ENST00000533302 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
TRIM29-220ENST00000533302 MYO15BQ96JP2 1530 aa10.73□□□□□ -0.69
TRIM29-220ENST00000533302 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
TRIM29-220ENST00000533302 STAG3Q9UJ98 1225 aa10.69□□□□□ -0.7
TRIM29-220ENST00000533302 PKD2Q13563 968 aa10.65□□□□□ -0.7
TRIM29-220ENST00000533302 CECR2Q9BXF3 1484 aa10.65□□□□□ -0.7
TRIM29-220ENST00000533302 DNAJC5Q9H3Z4 198 aa10.63□□□□□ -0.71
TRIM29-220ENST00000533302 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
TRIM29-220ENST00000533302 PLCD3Q8N3E9 789 aa10.6□□□□□ -0.71
TRIM29-220ENST00000533302 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
TRIM29-220ENST00000533302 SHROOM4Q9ULL8 1493 aa10.58□□□□□ -0.72
TRIM29-220ENST00000533302 MIER1Q8N108 512 aa10.58□□□□□ -0.72
TRIM29-220ENST00000533302 CC2D2AQ9P2K1 1620 aa10.53□□□□□ -0.72
TRIM29-220ENST00000533302 UNC13AQ9UPW8 1703 aa10.51□□□□□ -0.73
TRIM29-220ENST00000533302 DCAF1Q9Y4B6 1507 aa10.49□□□□□ -0.73
TRIM29-220ENST00000533302 ZCCHC6Q5VYS8 1495 aaKnown RBP10.49□□□□□ -0.73
TRIM29-220ENST00000533302 EIF4G1Q04637 1599 aaKnown RBP10.48□□□□□ -0.73
TRIM29-220ENST00000533302 ECM2O94769 699 aaPredicted RBP10.47□□□□□ -0.73
TRIM29-220ENST00000533302 PLCB2Q00722 1185 aa10.46□□□□□ -0.73
TRIM29-220ENST00000533302 RBM42Q9BTD8 480 aaKnown RBP10.45□□□□□ -0.74
TRIM29-220ENST00000533302 AKT1S1Q96B36 256 aa10.44□□□□□ -0.74
TRIM29-220ENST00000533302 PLEKHG5O94827 1062 aa10.43□□□□□ -0.74
TRIM29-220ENST00000533302 ZBTB47Q9UFB7 747 aaPredicted RBP10.42□□□□□ -0.74
TRIM29-220ENST00000533302 SCRIBQ14160 1630 aa10.42□□□□□ -0.74
TRIM29-220ENST00000533302 SPDYE1Q8NFV5 336 aaPredicted RBP10.4□□□□□ -0.74
TRIM29-220ENST00000533302 RGL2O15211 777 aa10.39□□□□□ -0.75
TRIM29-220ENST00000533302 CIZ1Q9ULV3 898 aaPredicted RBP10.37□□□□□ -0.75
TRIM29-220ENST00000533302 REM2Q8IYK8 340 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms