RNA–Protein interactions for RNA: ENST00000528467.1

GLI1-204, Transcript of GLI family zinc finger 1, humanhuman

TSL 1 (best)

Gene GLI1, Length 3,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-204ENST00000528467 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
GLI1-204ENST00000528467 PELP1Q8IZL8 1130 aaKnown RBP20.81■□□□□ 0.92
GLI1-204ENST00000528467 HRCP23327 699 aa20.44■□□□□ 0.86
GLI1-204ENST00000528467 MYT1Q01538 1121 aa20.24■□□□□ 0.83
GLI1-204ENST00000528467 PPARGC1BQ86YN6 1023 aaKnown RBP19.88■□□□□ 0.77
GLI1-204ENST00000528467 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
GLI1-204ENST00000528467 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
GLI1-204ENST00000528467 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
GLI1-204ENST00000528467 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
GLI1-204ENST00000528467 ACIN1Q9UKV3 1341 aaKnown RBP19.02■□□□□ 0.63
GLI1-204ENST00000528467 DCAF1Q9Y4B6 1507 aa18.99■□□□□ 0.63
GLI1-204ENST00000528467 ZEB1P37275 1124 aaPredicted RBP18.99■□□□□ 0.63
GLI1-204ENST00000528467 NEUROD1Q13562 356 aa18.89■□□□□ 0.61
GLI1-204ENST00000528467 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
GLI1-204ENST00000528467 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
GLI1-204ENST00000528467 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
GLI1-204ENST00000528467 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
GLI1-204ENST00000528467 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.61
GLI1-204ENST00000528467 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
GLI1-204ENST00000528467 CENPBP07199 599 aaPredicted RBP18.7■□□□□ 0.58
GLI1-204ENST00000528467 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
GLI1-204ENST00000528467 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
GLI1-204ENST00000528467 PRKCSHP14314 528 aaPredicted RBP18.52■□□□□ 0.56
GLI1-204ENST00000528467 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
GLI1-204ENST00000528467 ANP32EQ9BTT0 268 aa18.32■□□□□ 0.52
GLI1-204ENST00000528467 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
GLI1-204ENST00000528467 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
GLI1-204ENST00000528467 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
GLI1-204ENST00000528467 YTHDC1Q96MU7 727 aaKnown RBP18.01■□□□□ 0.47
GLI1-204ENST00000528467 APLP2Q06481 763 aa17.98■□□□□ 0.47
GLI1-204ENST00000528467 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
GLI1-204ENST00000528467 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
GLI1-204ENST00000528467 TSHZ2Q9NRE2 1034 aa17.93■□□□□ 0.46
GLI1-204ENST00000528467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
GLI1-204ENST00000528467 CLSPNQ9HAW4 1339 aa17.85■□□□□ 0.45
GLI1-204ENST00000528467 SUPT16HQ9Y5B9 1047 aaKnown RBP17.81■□□□□ 0.44
GLI1-204ENST00000528467 DCAF8L2P0C7V8 631 aa17.8■□□□□ 0.44
GLI1-204ENST00000528467 ZNF316A6NFI3 1004 aaPredicted RBP17.8■□□□□ 0.44
GLI1-204ENST00000528467 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
GLI1-204ENST00000528467 MIER1Q8N108 512 aa17.75■□□□□ 0.43
GLI1-204ENST00000528467 ANO8Q9HCE9 1232 aaPredicted RBP17.47■□□□□ 0.39
GLI1-204ENST00000528467 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
GLI1-204ENST00000528467 MSH5O43196 834 aa17.34■□□□□ 0.37
GLI1-204ENST00000528467 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
GLI1-204ENST00000528467 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
GLI1-204ENST00000528467 BCANQ96GW7 911 aa17.26■□□□□ 0.35
GLI1-204ENST00000528467 UBE2Q2Q8WVN8 375 aa17.25■□□□□ 0.35
GLI1-204ENST00000528467 DEKP35659 375 aaKnown RBP17.25■□□□□ 0.35
GLI1-204ENST00000528467 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
GLI1-204ENST00000528467 ERICH6BQ5W0A0 696 aa17.2■□□□□ 0.34
GLI1-204ENST00000528467 FANCIQ9NVI1 1328 aa17.18■□□□□ 0.34
GLI1-204ENST00000528467 FKBP8Q14318 412 aa17.16■□□□□ 0.34
GLI1-204ENST00000528467 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
GLI1-204ENST00000528467 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
GLI1-204ENST00000528467 NEFLP07196 543 aa17.01■□□□□ 0.31
GLI1-204ENST00000528467 ITGAEP38570 1179 aa17■□□□□ 0.31
GLI1-204ENST00000528467 EIF5BO60841 1220 aaKnown RBP16.91■□□□□ 0.3
GLI1-204ENST00000528467 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
GLI1-204ENST00000528467 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.9■□□□□ 0.3
GLI1-204ENST00000528467 ABCC9O60706 1549 aa16.89■□□□□ 0.3
GLI1-204ENST00000528467 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
GLI1-204ENST00000528467 CDK11AQ9UQ88 783 aaPredicted RBP16.87■□□□□ 0.29
GLI1-204ENST00000528467 IL27Q8NEV9 243 aa16.85■□□□□ 0.29
GLI1-204ENST00000528467 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
GLI1-204ENST00000528467 NBR1Q14596 966 aa16.81■□□□□ 0.28
GLI1-204ENST00000528467 PKNOX2Q96KN3 472 aa16.8■□□□□ 0.28
GLI1-204ENST00000528467 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
GLI1-204ENST00000528467 RTN4Q9NQC3 1192 aaKnown RBP16.79■□□□□ 0.28
GLI1-204ENST00000528467 CEP162Q5TB80 1403 aa16.78■□□□□ 0.28
GLI1-204ENST00000528467 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
GLI1-204ENST00000528467 NOP58Q9Y2X3 529 aaKnown RBP16.76■□□□□ 0.27
GLI1-204ENST00000528467 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
GLI1-204ENST00000528467 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
GLI1-204ENST00000528467 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
GLI1-204ENST00000528467 NACADO15069 1562 aa16.64■□□□□ 0.25
GLI1-204ENST00000528467 TNIKQ9UKE5 1360 aa16.63■□□□□ 0.25
GLI1-204ENST00000528467 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
GLI1-204ENST00000528467 DHX57Q6P158 1386 aaKnown RBP16.61■□□□□ 0.25
GLI1-204ENST00000528467 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
GLI1-204ENST00000528467 DAXXQ9UER7 740 aaPredicted RBP16.53■□□□□ 0.24
GLI1-204ENST00000528467 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
GLI1-204ENST00000528467 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
GLI1-204ENST00000528467 CCER2I3L3R5 266 aa16.52■□□□□ 0.24
GLI1-204ENST00000528467 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.24
GLI1-204ENST00000528467 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.23
GLI1-204ENST00000528467 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
GLI1-204ENST00000528467 PODXL2Q9NZ53 605 aa16.49■□□□□ 0.23
GLI1-204ENST00000528467 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
GLI1-204ENST00000528467 IPO9Q96P70 1041 aaKnown RBP16.47■□□□□ 0.23
GLI1-204ENST00000528467 WASHC2CQ9Y4E1 1318 aa16.46■□□□□ 0.23
GLI1-204ENST00000528467 ZBTB47Q9UFB7 747 aaPredicted RBP16.44■□□□□ 0.22
GLI1-204ENST00000528467 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
GLI1-204ENST00000528467 MROH2BQ7Z745 1585 aa16.42■□□□□ 0.22
GLI1-204ENST00000528467 RSPH6AQ9H0K4 717 aa16.42■□□□□ 0.22
GLI1-204ENST00000528467 GLIPR1L2Q4G1C9 344 aa16.41■□□□□ 0.22
GLI1-204ENST00000528467 PPP1R15AO75807 674 aaPredicted RBP16.41■□□□□ 0.22
GLI1-204ENST00000528467 UBTFP17480 764 aaKnown RBP16.39■□□□□ 0.21
GLI1-204ENST00000528467 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
GLI1-204ENST00000528467 ANP32CO43423 234 aa16.38■□□□□ 0.21
GLI1-204ENST00000528467 BRPF3Q9ULD4 1205 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms