RNA–Protein interactions for RNA: ENST00000525535.2

PAX6-220, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-220ENST00000525535 AEBP2Q6ZN18 517 aaPredicted RBP23.88■■□□□ 1.41
PAX6-220ENST00000525535 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
PAX6-220ENST00000525535 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
PAX6-220ENST00000525535 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
PAX6-220ENST00000525535 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
PAX6-220ENST00000525535 FOXD1Q16676 465 aa18.83■□□□□ 0.6
PAX6-220ENST00000525535 ADRA2BP18089 450 aa18.11■□□□□ 0.49
PAX6-220ENST00000525535 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
PAX6-220ENST00000525535 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
PAX6-220ENST00000525535 MSH5O43196 834 aa17.5■□□□□ 0.39
PAX6-220ENST00000525535 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
PAX6-220ENST00000525535 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
PAX6-220ENST00000525535 KCNA4P22459 653 aa16.62■□□□□ 0.25
PAX6-220ENST00000525535 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
PAX6-220ENST00000525535 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
PAX6-220ENST00000525535 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
PAX6-220ENST00000525535 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
PAX6-220ENST00000525535 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
PAX6-220ENST00000525535 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
PAX6-220ENST00000525535 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
PAX6-220ENST00000525535 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
PAX6-220ENST00000525535 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
PAX6-220ENST00000525535 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
PAX6-220ENST00000525535 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
PAX6-220ENST00000525535 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
PAX6-220ENST00000525535 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
PAX6-220ENST00000525535 ZBTB22O15209 634 aa15.31■□□□□ 0.04
PAX6-220ENST00000525535 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
PAX6-220ENST00000525535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
PAX6-220ENST00000525535 DNAJC5Q9H3Z4 198 aa15.23■□□□□ 0.03
PAX6-220ENST00000525535 SLC4A2P04920 1241 aa15.21■□□□□ 0.03
PAX6-220ENST00000525535 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
PAX6-220ENST00000525535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.96□□□□□ -0.01
PAX6-220ENST00000525535 HNRNPUL2Q1KMD3 747 aaKnown RBP14.96□□□□□ -0.01
PAX6-220ENST00000525535 ABCC9O60706 1549 aa14.96□□□□□ -0.02
PAX6-220ENST00000525535 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
PAX6-220ENST00000525535 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
PAX6-220ENST00000525535 NISCHQ9Y2I1 1504 aa14.91□□□□□ -0.02
PAX6-220ENST00000525535 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
PAX6-220ENST00000525535 APLP2Q06481 763 aa14.83□□□□□ -0.04
PAX6-220ENST00000525535 C1QBPQ07021 282 aaKnown RBP14.82□□□□□ -0.04
PAX6-220ENST00000525535 ATXN8OSP0DMR3 200 aa14.79□□□□□ -0.04
PAX6-220ENST00000525535 ZNF219Q9P2Y4 722 aaPredicted RBP14.51□□□□□ -0.09
PAX6-220ENST00000525535 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
PAX6-220ENST00000525535 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
PAX6-220ENST00000525535 CAPN15O75808 1086 aa14.46□□□□□ -0.09
PAX6-220ENST00000525535 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
PAX6-220ENST00000525535 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
PAX6-220ENST00000525535 DSG3P32926 999 aa14.19□□□□□ -0.14
PAX6-220ENST00000525535 POLA2Q14181 598 aa14.18□□□□□ -0.14
PAX6-220ENST00000525535 ZBTB12Q9Y330 459 aaPredicted RBP14.13□□□□□ -0.15
PAX6-220ENST00000525535 ABCB7O75027 752 aa14.12□□□□□ -0.15
PAX6-220ENST00000525535 FBLN2P98095 1184 aa14.04□□□□□ -0.16
PAX6-220ENST00000525535 TRIM41Q8WV44 630 aa14□□□□□ -0.17
PAX6-220ENST00000525535 FKBP8Q14318 412 aa13.9□□□□□ -0.18
PAX6-220ENST00000525535 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
PAX6-220ENST00000525535 PABPN1Q86U42 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
PAX6-220ENST00000525535 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
PAX6-220ENST00000525535 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
PAX6-220ENST00000525535 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
PAX6-220ENST00000525535 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
PAX6-220ENST00000525535 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
PAX6-220ENST00000525535 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
PAX6-220ENST00000525535 CECR2Q9BXF3 1484 aa13.6□□□□□ -0.23
PAX6-220ENST00000525535 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
PAX6-220ENST00000525535 SSUH2Q9Y2M2 353 aa13.53□□□□□ -0.24
PAX6-220ENST00000525535 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
PAX6-220ENST00000525535 PROM2Q8N271 834 aa13.47□□□□□ -0.25
PAX6-220ENST00000525535 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
PAX6-220ENST00000525535 CUX2O14529 1486 aa13.43□□□□□ -0.26
PAX6-220ENST00000525535 CC2D2AQ9P2K1 1620 aa13.41□□□□□ -0.26
PAX6-220ENST00000525535 ILDR1Q86SU0 546 aaPredicted RBP13.4□□□□□ -0.26
PAX6-220ENST00000525535 CCDC180Q9P1Z9 1646 aa13.38□□□□□ -0.27
PAX6-220ENST00000525535 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
PAX6-220ENST00000525535 STAG3Q9UJ98 1225 aa13.31□□□□□ -0.28
PAX6-220ENST00000525535 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
PAX6-220ENST00000525535 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
PAX6-220ENST00000525535 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
PAX6-220ENST00000525535 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
PAX6-220ENST00000525535 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
PAX6-220ENST00000525535 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
PAX6-220ENST00000525535 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
PAX6-220ENST00000525535 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
PAX6-220ENST00000525535 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
PAX6-220ENST00000525535 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
PAX6-220ENST00000525535 PLEKHG5O94827 1062 aa13.03□□□□□ -0.32
PAX6-220ENST00000525535 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
PAX6-220ENST00000525535 NACADO15069 1562 aa12.99□□□□□ -0.33
PAX6-220ENST00000525535 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
PAX6-220ENST00000525535 EIF4G1Q04637 1599 aaKnown RBP12.98□□□□□ -0.33
PAX6-220ENST00000525535 PLCD3Q8N3E9 789 aa12.97□□□□□ -0.33
PAX6-220ENST00000525535 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
PAX6-220ENST00000525535 MIER1Q8N108 512 aa12.96□□□□□ -0.33
PAX6-220ENST00000525535 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
PAX6-220ENST00000525535 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
PAX6-220ENST00000525535 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.35
PAX6-220ENST00000525535 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
PAX6-220ENST00000525535 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
PAX6-220ENST00000525535 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
PAX6-220ENST00000525535 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms