RNA–Protein interactions for RNA: ENST00000524936.1

TTC17-204, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 3

Gene TTC17, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-204ENST00000524936 AEBP2Q6ZN18 517 aaPredicted RBP24.91■■□□□ 1.58
TTC17-204ENST00000524936 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
TTC17-204ENST00000524936 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
TTC17-204ENST00000524936 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
TTC17-204ENST00000524936 FOXD1Q16676 465 aa19.88■□□□□ 0.77
TTC17-204ENST00000524936 POTEDQ86YR6 584 aa19.08■□□□□ 0.64
TTC17-204ENST00000524936 MSH5O43196 834 aa18.65■□□□□ 0.58
TTC17-204ENST00000524936 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
TTC17-204ENST00000524936 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
TTC17-204ENST00000524936 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
TTC17-204ENST00000524936 ADRA2BP18089 450 aa18.18■□□□□ 0.5
TTC17-204ENST00000524936 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
TTC17-204ENST00000524936 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
TTC17-204ENST00000524936 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
TTC17-204ENST00000524936 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
TTC17-204ENST00000524936 DCAF8L1A6NGE4 600 aa16.05■□□□□ 0.16
TTC17-204ENST00000524936 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
TTC17-204ENST00000524936 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
TTC17-204ENST00000524936 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
TTC17-204ENST00000524936 CNKSR2Q8WXI2 1034 aa15.72■□□□□ 0.11
TTC17-204ENST00000524936 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
TTC17-204ENST00000524936 C1QBPQ07021 282 aaKnown RBP15.62■□□□□ 0.09
TTC17-204ENST00000524936 NISCHQ9Y2I1 1504 aa15.55■□□□□ 0.08
TTC17-204ENST00000524936 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
TTC17-204ENST00000524936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.027e-10■■□□□ 11.5
TTC17-204ENST00000524936 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
TTC17-204ENST00000524936 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
TTC17-204ENST00000524936 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
TTC17-204ENST00000524936 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
TTC17-204ENST00000524936 POTEHQ6S545 545 aa14.82□□□□□ -0.04
TTC17-204ENST00000524936 DSG3P32926 999 aa14.8□□□□□ -0.04
TTC17-204ENST00000524936 CAPN15O75808 1086 aa14.73□□□□□ -0.05
TTC17-204ENST00000524936 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
TTC17-204ENST00000524936 ABCB7O75027 752 aa14.41□□□□□ -0.1
TTC17-204ENST00000524936 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
TTC17-204ENST00000524936 KCNA4P22459 653 aa14.36□□□□□ -0.11
TTC17-204ENST00000524936 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
TTC17-204ENST00000524936 APLP2Q06481 763 aa14.21□□□□□ -0.13
TTC17-204ENST00000524936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
TTC17-204ENST00000524936 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
TTC17-204ENST00000524936 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
TTC17-204ENST00000524936 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
TTC17-204ENST00000524936 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.17
TTC17-204ENST00000524936 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
TTC17-204ENST00000524936 ABCC9O60706 1549 aa13.93□□□□□ -0.18
TTC17-204ENST00000524936 POLA2Q14181 598 aa13.92□□□□□ -0.18
TTC17-204ENST00000524936 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
TTC17-204ENST00000524936 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
TTC17-204ENST00000524936 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
TTC17-204ENST00000524936 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
TTC17-204ENST00000524936 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
TTC17-204ENST00000524936 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
TTC17-204ENST00000524936 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
TTC17-204ENST00000524936 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
TTC17-204ENST00000524936 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
TTC17-204ENST00000524936 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
TTC17-204ENST00000524936 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
TTC17-204ENST00000524936 HAX1O00165 279 aa13.39□□□□□ -0.27
TTC17-204ENST00000524936 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
TTC17-204ENST00000524936 EVX2Q03828 476 aa13.34□□□□□ -0.27
TTC17-204ENST00000524936 ZBTB22O15209 634 aa13.25□□□□□ -0.29
TTC17-204ENST00000524936 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
TTC17-204ENST00000524936 NACADO15069 1562 aa13.15□□□□□ -0.3
TTC17-204ENST00000524936 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
TTC17-204ENST00000524936 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
TTC17-204ENST00000524936 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
TTC17-204ENST00000524936 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
TTC17-204ENST00000524936 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
TTC17-204ENST00000524936 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.33
TTC17-204ENST00000524936 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
TTC17-204ENST00000524936 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
TTC17-204ENST00000524936 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
TTC17-204ENST00000524936 FBLN2P98095 1184 aa12.99□□□□□ -0.33
TTC17-204ENST00000524936 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
TTC17-204ENST00000524936 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
TTC17-204ENST00000524936 UNC13AQ9UPW8 1703 aa12.94□□□□□ -0.34
TTC17-204ENST00000524936 ZCCHC6Q5VYS8 1495 aaKnown RBP12.94□□□□□ -0.34
TTC17-204ENST00000524936 PABPN1Q86U42 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
TTC17-204ENST00000524936 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
TTC17-204ENST00000524936 GABBR2O75899 941 aa12.92□□□□□ -0.34
TTC17-204ENST00000524936 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
TTC17-204ENST00000524936 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
TTC17-204ENST00000524936 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
TTC17-204ENST00000524936 DCAF1Q9Y4B6 1507 aa12.84□□□□□ -0.35
TTC17-204ENST00000524936 LHX8Q68G74 356 aa12.82□□□□□ -0.36
TTC17-204ENST00000524936 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
TTC17-204ENST00000524936 POTEIP0CG38 1075 aa12.72□□□□□ -0.37
TTC17-204ENST00000524936 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.38
TTC17-204ENST00000524936 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
TTC17-204ENST00000524936 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
TTC17-204ENST00000524936 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
TTC17-204ENST00000524936 EIF4G1Q04637 1599 aaKnown RBP12.57□□□□□ -0.4
TTC17-204ENST00000524936 CC2D2AQ9P2K1 1620 aa12.57□□□□□ -0.4
TTC17-204ENST00000524936 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
TTC17-204ENST00000524936 CLCN6P51797 869 aa12.4□□□□□ -0.42
TTC17-204ENST00000524936 ZNF579Q8NAF0 562 aaKnown RBP12.4□□□□□ -0.42
TTC17-204ENST00000524936 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
TTC17-204ENST00000524936 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
TTC17-204ENST00000524936 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
TTC17-204ENST00000524936 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms