RNA–Protein interactions for RNA: ENST00000522409.1

ZFHX4-208, Transcript of zinc finger homeobox 4, humanhuman

TSL 3

Gene ZFHX4, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4-208ENST00000522409 AEBP2Q6ZN18 517 aaPredicted RBP27.61■■■□□ 2.01
ZFHX4-208ENST00000522409 CHIC1Q5VXU3 224 aa26.24■■□□□ 1.79
ZFHX4-208ENST00000522409 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
ZFHX4-208ENST00000522409 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
ZFHX4-208ENST00000522409 FOXD1Q16676 465 aa21.96■■□□□ 1.11
ZFHX4-208ENST00000522409 PLPPR3Q6T4P5 718 aa21.23■□□□□ 0.99
ZFHX4-208ENST00000522409 MSH5O43196 834 aa20.57■□□□□ 0.88
ZFHX4-208ENST00000522409 PIAS4Q8N2W9 510 aaPredicted RBP20.53■□□□□ 0.88
ZFHX4-208ENST00000522409 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
ZFHX4-208ENST00000522409 ADRA2BP18089 450 aa20.47■□□□□ 0.87
ZFHX4-208ENST00000522409 POTEDQ86YR6 584 aa20.05■□□□□ 0.8
ZFHX4-208ENST00000522409 KCNA4P22459 653 aa19.44■□□□□ 0.7
ZFHX4-208ENST00000522409 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
ZFHX4-208ENST00000522409 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
ZFHX4-208ENST00000522409 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
ZFHX4-208ENST00000522409 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
ZFHX4-208ENST00000522409 DMRT2Q9Y5R5 561 aa18.69■□□□□ 0.58
ZFHX4-208ENST00000522409 SLC4A1APQ9BWU0 796 aaKnown RBP18.64■□□□□ 0.57
ZFHX4-208ENST00000522409 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
ZFHX4-208ENST00000522409 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
ZFHX4-208ENST00000522409 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
ZFHX4-208ENST00000522409 CNKSR2Q8WXI2 1034 aa18.11■□□□□ 0.49
ZFHX4-208ENST00000522409 HOXD11P31277 338 aaPredicted RBP18■□□□□ 0.47
ZFHX4-208ENST00000522409 ZBTB22O15209 634 aa17.94■□□□□ 0.46
ZFHX4-208ENST00000522409 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
ZFHX4-208ENST00000522409 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
ZFHX4-208ENST00000522409 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
ZFHX4-208ENST00000522409 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
ZFHX4-208ENST00000522409 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
ZFHX4-208ENST00000522409 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
ZFHX4-208ENST00000522409 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
ZFHX4-208ENST00000522409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
ZFHX4-208ENST00000522409 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
ZFHX4-208ENST00000522409 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
ZFHX4-208ENST00000522409 MYCNP04198 464 aaPredicted RBP16.89■□□□□ 0.29
ZFHX4-208ENST00000522409 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
ZFHX4-208ENST00000522409 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
ZFHX4-208ENST00000522409 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.28
ZFHX4-208ENST00000522409 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
ZFHX4-208ENST00000522409 FKBP8Q14318 412 aa16.67■□□□□ 0.26
ZFHX4-208ENST00000522409 SLC24A1O60721 1099 aa16.61■□□□□ 0.25
ZFHX4-208ENST00000522409 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
ZFHX4-208ENST00000522409 CAPN15O75808 1086 aa16.53■□□□□ 0.24
ZFHX4-208ENST00000522409 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
ZFHX4-208ENST00000522409 DSG3P32926 999 aa16.43■□□□□ 0.22
ZFHX4-208ENST00000522409 APLP2Q06481 763 aa16.35■□□□□ 0.21
ZFHX4-208ENST00000522409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
ZFHX4-208ENST00000522409 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
ZFHX4-208ENST00000522409 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
ZFHX4-208ENST00000522409 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
ZFHX4-208ENST00000522409 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
ZFHX4-208ENST00000522409 ABCC9O60706 1549 aa16.19■□□□□ 0.18
ZFHX4-208ENST00000522409 ABCB7O75027 752 aa16.14■□□□□ 0.17
ZFHX4-208ENST00000522409 POLA2Q14181 598 aa15.83■□□□□ 0.12
ZFHX4-208ENST00000522409 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
ZFHX4-208ENST00000522409 SPDYE4A6NLX3 237 aa15.8■□□□□ 0.12
ZFHX4-208ENST00000522409 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
ZFHX4-208ENST00000522409 PROM2Q8N271 834 aa15.74■□□□□ 0.11
ZFHX4-208ENST00000522409 POTEHQ6S545 545 aa15.72■□□□□ 0.11
ZFHX4-208ENST00000522409 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
ZFHX4-208ENST00000522409 VASPP50552 380 aaPredicted RBP15.59■□□□□ 0.09
ZFHX4-208ENST00000522409 FBLN2P98095 1184 aa15.59■□□□□ 0.09
ZFHX4-208ENST00000522409 ZBTB12Q9Y330 459 aaPredicted RBP15.52■□□□□ 0.08
ZFHX4-208ENST00000522409 IFNLR1Q8IU57 520 aaPredicted RBP15.5■□□□□ 0.07
ZFHX4-208ENST00000522409 PLCB2Q00722 1185 aa15.48■□□□□ 0.07
ZFHX4-208ENST00000522409 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
ZFHX4-208ENST00000522409 PKD2Q13563 968 aa15.34■□□□□ 0.05
ZFHX4-208ENST00000522409 CHRDL2Q6WN34 429 aa15.33■□□□□ 0.04
ZFHX4-208ENST00000522409 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
ZFHX4-208ENST00000522409 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
ZFHX4-208ENST00000522409 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
ZFHX4-208ENST00000522409 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
ZFHX4-208ENST00000522409 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
ZFHX4-208ENST00000522409 REM2Q8IYK8 340 aaPredicted RBP15.17■□□□□ 0.02
ZFHX4-208ENST00000522409 SPOCK2Q92563 424 aa15.12■□□□□ 0.01
ZFHX4-208ENST00000522409 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
ZFHX4-208ENST00000522409 VSIG10Q8N0Z9 540 aa15.07■□□□□ 0
ZFHX4-208ENST00000522409 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
ZFHX4-208ENST00000522409 ZNF692Q9BU19 519 aaPredicted RBP15.06■□□□□ 0
ZFHX4-208ENST00000522409 RB1CC1Q8TDY2 1594 aa15.05■□□□□ -0
ZFHX4-208ENST00000522409 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
ZFHX4-208ENST00000522409 SPDYE6P0CI01 402 aa15.03■□□□□ -0
ZFHX4-208ENST00000522409 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
ZFHX4-208ENST00000522409 ECM2O94769 699 aaPredicted RBP15.02■□□□□ -0
ZFHX4-208ENST00000522409 PITPNM1O00562 1244 aa15.01□□□□□ -0.01
ZFHX4-208ENST00000522409 BBXQ8WY36 941 aaPredicted RBP15.01□□□□□ -0.01
ZFHX4-208ENST00000522409 BCANQ96GW7 911 aa14.99□□□□□ -0.01
ZFHX4-208ENST00000522409 SSUH2Q9Y2M2 353 aa14.99□□□□□ -0.01
ZFHX4-208ENST00000522409 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
ZFHX4-208ENST00000522409 PIP4P2Q8N4L2 257 aa14.97□□□□□ -0.01
ZFHX4-208ENST00000522409 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
ZFHX4-208ENST00000522409 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
ZFHX4-208ENST00000522409 PLCD3Q8N3E9 789 aa14.93□□□□□ -0.02
ZFHX4-208ENST00000522409 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
ZFHX4-208ENST00000522409 MIER1Q8N108 512 aa14.89□□□□□ -0.03
ZFHX4-208ENST00000522409 RGL2O15211 777 aa14.88□□□□□ -0.03
ZFHX4-208ENST00000522409 KDM2AQ9Y2K7 1162 aa14.88□□□□□ -0.03
ZFHX4-208ENST00000522409 PAXIP1Q6ZW49 1069 aaPredicted RBP14.87□□□□□ -0.03
ZFHX4-208ENST00000522409 CFAP44Q96MT7 982 aa14.81□□□□□ -0.04
ZFHX4-208ENST00000522409 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms