RNA–Protein interactions for RNA: ENST00000522046.1

LRP12-206, Transcript of LDL receptor related protein 12, humanhuman

TSL 2

Gene LRP12, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP12-206ENST00000522046 AEBP2Q6ZN18 517 aaPredicted RBP26.24■■□□□ 1.79
LRP12-206ENST00000522046 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
LRP12-206ENST00000522046 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
LRP12-206ENST00000522046 PHF23Q9BUL5 403 aaPredicted RBP22.17■■□□□ 1.14
LRP12-206ENST00000522046 FOXD1Q16676 465 aa20.78■□□□□ 0.92
LRP12-206ENST00000522046 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
LRP12-206ENST00000522046 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
LRP12-206ENST00000522046 ADRA2BP18089 450 aa19.65■□□□□ 0.74
LRP12-206ENST00000522046 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
LRP12-206ENST00000522046 MSH5O43196 834 aa19.34■□□□□ 0.69
LRP12-206ENST00000522046 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
LRP12-206ENST00000522046 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
LRP12-206ENST00000522046 MAPK8IP2Q13387 824 aaPredicted RBP17.93■□□□□ 0.46
LRP12-206ENST00000522046 PPP4R3CPQ6ZMV5 832 aa17.89■□□□□ 0.45
LRP12-206ENST00000522046 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
LRP12-206ENST00000522046 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
LRP12-206ENST00000522046 NISCHQ9Y2I1 1504 aa17.38■□□□□ 0.37
LRP12-206ENST00000522046 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
LRP12-206ENST00000522046 HOXD11P31277 338 aaPredicted RBP17.27■□□□□ 0.36
LRP12-206ENST00000522046 RNF216Q9NWF9 866 aaPredicted RBP17.24■□□□□ 0.35
LRP12-206ENST00000522046 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
LRP12-206ENST00000522046 KCNA4P22459 653 aa17.03■□□□□ 0.32
LRP12-206ENST00000522046 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
LRP12-206ENST00000522046 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
LRP12-206ENST00000522046 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
LRP12-206ENST00000522046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
LRP12-206ENST00000522046 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
LRP12-206ENST00000522046 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
LRP12-206ENST00000522046 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
LRP12-206ENST00000522046 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
LRP12-206ENST00000522046 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
LRP12-206ENST00000522046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
LRP12-206ENST00000522046 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
LRP12-206ENST00000522046 ABCC9O60706 1549 aa15.82■□□□□ 0.12
LRP12-206ENST00000522046 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
LRP12-206ENST00000522046 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
LRP12-206ENST00000522046 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
LRP12-206ENST00000522046 APLP2Q06481 763 aa15.77■□□□□ 0.12
LRP12-206ENST00000522046 CAPN15O75808 1086 aa15.76■□□□□ 0.11
LRP12-206ENST00000522046 SAMD1Q6SPF0 538 aaPredicted RBP15.76■□□□□ 0.11
LRP12-206ENST00000522046 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
LRP12-206ENST00000522046 ZBTB22O15209 634 aa15.65■□□□□ 0.1
LRP12-206ENST00000522046 DSG3P32926 999 aa15.59■□□□□ 0.09
LRP12-206ENST00000522046 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
LRP12-206ENST00000522046 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
LRP12-206ENST00000522046 ABCB7O75027 752 aa15.41■□□□□ 0.06
LRP12-206ENST00000522046 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
LRP12-206ENST00000522046 ATXN8OSP0DMR3 200 aa15.3■□□□□ 0.04
LRP12-206ENST00000522046 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
LRP12-206ENST00000522046 POLA2Q14181 598 aa15.25■□□□□ 0.03
LRP12-206ENST00000522046 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
LRP12-206ENST00000522046 RB1CC1Q8TDY2 1594 aa15.07■□□□□ 0
LRP12-206ENST00000522046 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
LRP12-206ENST00000522046 NACADO15069 1562 aa14.9□□□□□ -0.02
LRP12-206ENST00000522046 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
LRP12-206ENST00000522046 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
LRP12-206ENST00000522046 FBLN2P98095 1184 aa14.78□□□□□ -0.04
LRP12-206ENST00000522046 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
LRP12-206ENST00000522046 POTEHQ6S545 545 aa14.71□□□□□ -0.05
LRP12-206ENST00000522046 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
LRP12-206ENST00000522046 UNC13AQ9UPW8 1703 aa14.68□□□□□ -0.06
LRP12-206ENST00000522046 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
LRP12-206ENST00000522046 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
LRP12-206ENST00000522046 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
LRP12-206ENST00000522046 SPDYE2BA6NHP3 402 aa14.56□□□□□ -0.08
LRP12-206ENST00000522046 SPDYE6P0CI01 402 aa14.56□□□□□ -0.08
LRP12-206ENST00000522046 SPDYE2Q495Y8 402 aa14.56□□□□□ -0.08
LRP12-206ENST00000522046 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
LRP12-206ENST00000522046 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
LRP12-206ENST00000522046 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
LRP12-206ENST00000522046 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
LRP12-206ENST00000522046 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
LRP12-206ENST00000522046 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
LRP12-206ENST00000522046 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
LRP12-206ENST00000522046 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
LRP12-206ENST00000522046 SCRIBQ14160 1630 aa14.31□□□□□ -0.12
LRP12-206ENST00000522046 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
LRP12-206ENST00000522046 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
LRP12-206ENST00000522046 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
LRP12-206ENST00000522046 EIF4G1Q04637 1599 aaKnown RBP14.23□□□□□ -0.13
LRP12-206ENST00000522046 SPDYE1Q8NFV5 336 aaPredicted RBP14.22□□□□□ -0.13
LRP12-206ENST00000522046 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
LRP12-206ENST00000522046 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
LRP12-206ENST00000522046 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
LRP12-206ENST00000522046 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
LRP12-206ENST00000522046 PRR29P0C7W0 189 aa13.98□□□□□ -0.17
LRP12-206ENST00000522046 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
LRP12-206ENST00000522046 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
LRP12-206ENST00000522046 PROM2Q8N271 834 aa13.9□□□□□ -0.18
LRP12-206ENST00000522046 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
LRP12-206ENST00000522046 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
LRP12-206ENST00000522046 FKBP8Q14318 412 aa13.82□□□□□ -0.2
LRP12-206ENST00000522046 HAX1O00165 279 aa13.78□□□□□ -0.2
LRP12-206ENST00000522046 ERCC6Q03468 1493 aa13.77□□□□□ -0.21
LRP12-206ENST00000522046 CUX2O14529 1486 aa13.75□□□□□ -0.21
LRP12-206ENST00000522046 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
LRP12-206ENST00000522046 NCAPD3P42695 1498 aa13.69□□□□□ -0.22
LRP12-206ENST00000522046 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
LRP12-206ENST00000522046 SMARCA2P51531 1590 aa13.67□□□□□ -0.22
LRP12-206ENST00000522046 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms