RNA–Protein interactions for RNA: ENST00000520124.5

LGI3-205, Transcript of leucine rich repeat LGI family member 3, humanhuman

TSL 1 (best)

Gene LGI3, Length 4,420 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3-205ENST00000520124 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
LGI3-205ENST00000520124 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
LGI3-205ENST00000520124 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
LGI3-205ENST00000520124 SHROOM4Q9ULL8 1493 aa31.7■■■□□ 2.66
LGI3-205ENST00000520124 PCGF6Q9BYE7 350 aa31.11■■■□□ 2.57
LGI3-205ENST00000520124 EHMT2Q96KQ7 1210 aa31.06■■■□□ 2.56
LGI3-205ENST00000520124 FAM9AQ8IZU1 332 aaPredicted RBP30.37■■■□□ 2.45
LGI3-205ENST00000520124 TTBK1Q5TCY1 1321 aaPredicted RBP30.12■■■□□ 2.41
LGI3-205ENST00000520124 HRCP23327 699 aa30.08■■■□□ 2.41
LGI3-205ENST00000520124 PELP1Q8IZL8 1130 aaKnown RBP30.01■■■□□ 2.39
LGI3-205ENST00000520124 ZEB1P37275 1124 aaPredicted RBP29.88■■■□□ 2.37
LGI3-205ENST00000520124 CENPBP07199 599 aaPredicted RBP29.83■■■□□ 2.37
LGI3-205ENST00000520124 PPARGC1BQ86YN6 1023 aaKnown RBP29.81■■■□□ 2.36
LGI3-205ENST00000520124 CCER1Q8TC90 406 aaPredicted RBP29.77■■■□□ 2.36
LGI3-205ENST00000520124 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
LGI3-205ENST00000520124 APLP2Q06481 763 aa29.55■■■□□ 2.32
LGI3-205ENST00000520124 LOC105371045A0A1W2PR82 267 aa29.52■■■□□ 2.32
LGI3-205ENST00000520124 YTHDC1Q96MU7 727 aaKnown RBP29.5■■■□□ 2.31
LGI3-205ENST00000520124 TRIM26Q12899 539 aaPredicted RBP29.5■■■□□ 2.31
LGI3-205ENST00000520124 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.31
LGI3-205ENST00000520124 RANGAP1P46060 587 aaPredicted RBP29.25■■■□□ 2.27
LGI3-205ENST00000520124 MYT1Q01538 1121 aa29.2■■■□□ 2.26
LGI3-205ENST00000520124 UBTFP17480 764 aaKnown RBP28.99■■■□□ 2.23
LGI3-205ENST00000520124 ERICH6Q7L0X2 663 aa28.91■■■□□ 2.22
LGI3-205ENST00000520124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.79■■■□□ 2.2
LGI3-205ENST00000520124 DIEXFQ68CQ4 756 aaKnown RBP28.64■■■□□ 2.18
LGI3-205ENST00000520124 NEFLP07196 543 aa28.64■■■□□ 2.17
LGI3-205ENST00000520124 GTF3C3Q9Y5Q9 886 aa28.55■■■□□ 2.16
LGI3-205ENST00000520124 HNRNPUL2Q1KMD3 747 aaKnown RBP28.51■■■□□ 2.16
LGI3-205ENST00000520124 ATP1B4Q9UN42 357 aaPredicted RBP28.49■■■□□ 2.15
LGI3-205ENST00000520124 ITGAEP38570 1179 aa28.28■■■□□ 2.12
LGI3-205ENST00000520124 ACIN1Q9UKV3 1341 aaKnown RBP28.2■■■□□ 2.1
LGI3-205ENST00000520124 SCAF1Q9H7N4 1312 aaKnown RBP27.97■■■□□ 2.07
LGI3-205ENST00000520124 BCANQ96GW7 911 aa27.95■■■□□ 2.07
LGI3-205ENST00000520124 NEUROD1Q13562 356 aa27.86■■■□□ 2.05
LGI3-205ENST00000520124 ZNF316A6NFI3 1004 aaPredicted RBP27.85■■■□□ 2.05
LGI3-205ENST00000520124 CNGB1Q14028 1251 aaPredicted RBP27.82■■■□□ 2.04
LGI3-205ENST00000520124 POLR3GLQ9BT43 218 aa27.7■■■□□ 2.02
LGI3-205ENST00000520124 DCAF1Q9Y4B6 1507 aa27.63■■■□□ 2.01
LGI3-205ENST00000520124 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
LGI3-205ENST00000520124 DAXXQ9UER7 740 aaPredicted RBP27.41■■□□□ 1.98
LGI3-205ENST00000520124 RTL5Q5HYW3 569 aaPredicted RBP27.38■■□□□ 1.97
LGI3-205ENST00000520124 FAM50AQ14320 339 aaKnown RBP27.36■■□□□ 1.97
LGI3-205ENST00000520124 ANP32CO43423 234 aa27.25■■□□□ 1.95
LGI3-205ENST00000520124 MIER1Q8N108 512 aa27.24■■□□□ 1.95
LGI3-205ENST00000520124 CDK11AQ9UQ88 783 aaPredicted RBP27.23■■□□□ 1.95
LGI3-205ENST00000520124 FKBP8Q14318 412 aa27.19■■□□□ 1.94
LGI3-205ENST00000520124 CSRNP3Q8WYN3 585 aa27.18■■□□□ 1.94
LGI3-205ENST00000520124 TRIM52Q96A61 297 aa27■■□□□ 1.91
LGI3-205ENST00000520124 DDX10Q13206 875 aaKnown RBP26.97■■□□□ 1.91
LGI3-205ENST00000520124 PABPN1Q86U42 306 aaKnown RBP eCLIP26.94■■□□□ 1.9
LGI3-205ENST00000520124 CLSPNQ9HAW4 1339 aa26.91■■□□□ 1.9
LGI3-205ENST00000520124 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
LGI3-205ENST00000520124 MYT1LQ9UL68 1186 aa26.84■■□□□ 1.89
LGI3-205ENST00000520124 ZNF326Q5BKZ1 582 aaKnown RBP26.83■■□□□ 1.89
LGI3-205ENST00000520124 ABCC9O60706 1549 aa26.8■■□□□ 1.88
LGI3-205ENST00000520124 HNRNPUQ00839 825 aaKnown RBP eCLIP26.79■■□□□ 1.88
LGI3-205ENST00000520124 P3H3Q8IVL6 736 aa26.77■■□□□ 1.88
LGI3-205ENST00000520124 NPM2Q86SE8 214 aaKnown RBP26.71■■□□□ 1.87
LGI3-205ENST00000520124 HIRIP3Q9BW71 556 aaPredicted RBP26.7■■□□□ 1.87
LGI3-205ENST00000520124 ANP32AP39687 249 aaKnown RBP26.69■■□□□ 1.86
LGI3-205ENST00000520124 IRX6P78412 446 aaPredicted RBP26.69■■□□□ 1.86
LGI3-205ENST00000520124 CCDC180Q9P1Z9 1646 aa26.68■■□□□ 1.86
LGI3-205ENST00000520124 NBR1Q14596 966 aa26.63■■□□□ 1.85
LGI3-205ENST00000520124 ANP32EQ9BTT0 268 aa26.61■■□□□ 1.85
LGI3-205ENST00000520124 FAM9BQ8IZU0 186 aa26.59■■□□□ 1.85
LGI3-205ENST00000520124 SLC4A1APQ9BWU0 796 aaKnown RBP26.55■■□□□ 1.84
LGI3-205ENST00000520124 EIF5BO60841 1220 aaKnown RBP26.53■■□□□ 1.84
LGI3-205ENST00000520124 SUPT16HQ9Y5B9 1047 aaKnown RBP26.47■■□□□ 1.83
LGI3-205ENST00000520124 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
LGI3-205ENST00000520124 TONSLQ96HA7 1378 aa26.47■■□□□ 1.83
LGI3-205ENST00000520124 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
LGI3-205ENST00000520124 CEP162Q5TB80 1403 aa26.39■■□□□ 1.81
LGI3-205ENST00000520124 SALL2Q9Y467 1007 aaPredicted RBP26.38■■□□□ 1.81
LGI3-205ENST00000520124 CCDC136Q96JN2 1154 aa26.36■■□□□ 1.81
LGI3-205ENST00000520124 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
LGI3-205ENST00000520124 ZBTB47Q9UFB7 747 aaPredicted RBP26.32■■□□□ 1.8
LGI3-205ENST00000520124 CLIP1P30622 1438 aa26.3■■□□□ 1.8
LGI3-205ENST00000520124 MRS2Q9HD23 443 aa26.28■■□□□ 1.8
LGI3-205ENST00000520124 SENP3-EIF4A1A0A087X0R7 540 aa26.23■■□□□ 1.79
LGI3-205ENST00000520124 BCL11AQ9H165 835 aa26.22■■□□□ 1.79
LGI3-205ENST00000520124 CHIC2Q9UKJ5 165 aa26.19■■□□□ 1.78
LGI3-205ENST00000520124 CANXP27824 592 aaKnown RBP26.17■■□□□ 1.78
LGI3-205ENST00000520124 TMC1Q8TDI8 760 aa26.11■■□□□ 1.77
LGI3-205ENST00000520124 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
LGI3-205ENST00000520124 FBLN2P98095 1184 aa26.08■■□□□ 1.77
LGI3-205ENST00000520124 SIN3AQ96ST3 1273 aa26.08■■□□□ 1.76
LGI3-205ENST00000520124 TNIKQ9UKE5 1360 aa26.06■■□□□ 1.76
LGI3-205ENST00000520124 RBM19Q9Y4C8 960 aaKnown RBP26.05■■□□□ 1.76
LGI3-205ENST00000520124 ARXQ96QS3 562 aa26.04■■□□□ 1.76
LGI3-205ENST00000520124 TSHZ2Q9NRE2 1034 aa26.03■■□□□ 1.76
LGI3-205ENST00000520124 GOLGA3Q08378 1498 aa25.98■■□□□ 1.75
LGI3-205ENST00000520124 EIF4G2P78344 907 aaKnown RBP eCLIP25.96■■□□□ 1.75
LGI3-205ENST00000520124 RTN4Q9NQC3 1192 aaKnown RBP25.96■■□□□ 1.75
LGI3-205ENST00000520124 B4GALNT3Q6L9W6 998 aa25.94■■□□□ 1.74
LGI3-205ENST00000520124 RRP7BPQ9NSQ0 103 aa25.89■■□□□ 1.73
LGI3-205ENST00000520124 EEA1Q15075 1411 aa25.87■■□□□ 1.73
LGI3-205ENST00000520124 PPP4R2Q9NY27 417 aa25.84■■□□□ 1.73
LGI3-205ENST00000520124 KDM2AQ9Y2K7 1162 aa25.84■■□□□ 1.73
LGI3-205ENST00000520124 SOGA1O94964 1423 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms