RNA–Protein interactions for RNA: ENST00000518836.5

EBF1-205, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 5,127 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-205ENST00000518836 NISCHQ9Y2I1 1504 aa28.78■■■□□ 2.2
EBF1-205ENST00000518836 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
EBF1-205ENST00000518836 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
EBF1-205ENST00000518836 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
EBF1-205ENST00000518836 CCDC180Q9P1Z9 1646 aa24.3■■□□□ 1.48
EBF1-205ENST00000518836 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
EBF1-205ENST00000518836 TRIM41Q8WV44 630 aa23.92■■□□□ 1.42
EBF1-205ENST00000518836 ABCC9O60706 1549 aa23.8■■□□□ 1.4
EBF1-205ENST00000518836 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
EBF1-205ENST00000518836 FAM9AQ8IZU1 332 aaPredicted RBP23.78■■□□□ 1.4
EBF1-205ENST00000518836 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
EBF1-205ENST00000518836 APLP2Q06481 763 aa23.56■■□□□ 1.36
EBF1-205ENST00000518836 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
EBF1-205ENST00000518836 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
EBF1-205ENST00000518836 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
EBF1-205ENST00000518836 ZEB1P37275 1124 aaPredicted RBP23.29■■□□□ 1.32
EBF1-205ENST00000518836 UBTFP17480 764 aaKnown RBP23.24■■□□□ 1.31
EBF1-205ENST00000518836 TRIM26Q12899 539 aaPredicted RBP23.12■■□□□ 1.29
EBF1-205ENST00000518836 NACADO15069 1562 aa23.11■■□□□ 1.29
EBF1-205ENST00000518836 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
EBF1-205ENST00000518836 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
EBF1-205ENST00000518836 RB1CC1Q8TDY2 1594 aa23.04■■□□□ 1.28
EBF1-205ENST00000518836 TTBK1Q5TCY1 1321 aaPredicted RBP23■■□□□ 1.27
EBF1-205ENST00000518836 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
EBF1-205ENST00000518836 CCER1Q8TC90 406 aaPredicted RBP22.9■■□□□ 1.26
EBF1-205ENST00000518836 HRCP23327 699 aa22.85■■□□□ 1.25
EBF1-205ENST00000518836 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
EBF1-205ENST00000518836 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
EBF1-205ENST00000518836 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
EBF1-205ENST00000518836 ATP1B4Q9UN42 357 aaPredicted RBP22.63■■□□□ 1.21
EBF1-205ENST00000518836 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
EBF1-205ENST00000518836 CSRNP3Q8WYN3 585 aa22.47■■□□□ 1.19
EBF1-205ENST00000518836 CENPBP07199 599 aaPredicted RBP22.4■■□□□ 1.18
EBF1-205ENST00000518836 PELP1Q8IZL8 1130 aaKnown RBP22.39■■□□□ 1.18
EBF1-205ENST00000518836 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.16
EBF1-205ENST00000518836 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
EBF1-205ENST00000518836 EEA1Q15075 1411 aa22.24■■□□□ 1.15
EBF1-205ENST00000518836 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
EBF1-205ENST00000518836 BAZ1BQ9UIG0 1483 aaKnown RBP22.19■■□□□ 1.14
EBF1-205ENST00000518836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.12■■□□□ 1.13
EBF1-205ENST00000518836 ITGAEP38570 1179 aa22.1■■□□□ 1.13
EBF1-205ENST00000518836 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
EBF1-205ENST00000518836 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
EBF1-205ENST00000518836 GOLGA3Q08378 1498 aa21.98■■□□□ 1.11
EBF1-205ENST00000518836 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
EBF1-205ENST00000518836 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
EBF1-205ENST00000518836 WIZO95785 1651 aa21.92■■□□□ 1.1
EBF1-205ENST00000518836 FAM50AQ14320 339 aaKnown RBP21.89■■□□□ 1.09
EBF1-205ENST00000518836 TNIKQ9UKE5 1360 aa21.88■■□□□ 1.09
EBF1-205ENST00000518836 SMARCA4P51532 1647 aa21.86■■□□□ 1.09
EBF1-205ENST00000518836 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
EBF1-205ENST00000518836 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
EBF1-205ENST00000518836 CLIP1P30622 1438 aa21.85■■□□□ 1.09
EBF1-205ENST00000518836 DIEXFQ68CQ4 756 aaKnown RBP21.8■■□□□ 1.08
EBF1-205ENST00000518836 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
EBF1-205ENST00000518836 KIF27Q86VH2 1401 aa21.76■■□□□ 1.07
EBF1-205ENST00000518836 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
EBF1-205ENST00000518836 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
EBF1-205ENST00000518836 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
EBF1-205ENST00000518836 NEFLP07196 543 aa21.65■■□□□ 1.06
EBF1-205ENST00000518836 SOGA1O94964 1423 aa21.62■■□□□ 1.05
EBF1-205ENST00000518836 ZNF316A6NFI3 1004 aaPredicted RBP21.62■■□□□ 1.05
EBF1-205ENST00000518836 FBLN2P98095 1184 aa21.55■■□□□ 1.04
EBF1-205ENST00000518836 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
EBF1-205ENST00000518836 CDK11AQ9UQ88 783 aaPredicted RBP21.55■■□□□ 1.04
EBF1-205ENST00000518836 NEUROD1Q13562 356 aa21.49■■□□□ 1.03
EBF1-205ENST00000518836 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.03
EBF1-205ENST00000518836 CUX2O14529 1486 aa21.4■■□□□ 1.02
EBF1-205ENST00000518836 MTUS2Q5JR59 1369 aa21.37■■□□□ 1.01
EBF1-205ENST00000518836 VPS8Q8N3P4 1428 aa21.36■■□□□ 1.01
EBF1-205ENST00000518836 CARMIL1Q5VZK9 1371 aa21.35■■□□□ 1.01
EBF1-205ENST00000518836 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
EBF1-205ENST00000518836 FHAD1B1AJZ9 1412 aa21.31■■□□□ 1
EBF1-205ENST00000518836 POLR3GLQ9BT43 218 aa21.29■■□□□ 1
EBF1-205ENST00000518836 NCAPD3P42695 1498 aa21.28■■□□□ 1
EBF1-205ENST00000518836 ARID3CA6NKF2 412 aa21.27■■□□□ 1
EBF1-205ENST00000518836 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
EBF1-205ENST00000518836 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
EBF1-205ENST00000518836 ANP32CO43423 234 aa21.24■□□□□ 0.99
EBF1-205ENST00000518836 MYT1Q01538 1121 aa21.23■□□□□ 0.99
EBF1-205ENST00000518836 TONSLQ96HA7 1378 aa21.21■□□□□ 0.99
EBF1-205ENST00000518836 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
EBF1-205ENST00000518836 CLSPNQ9HAW4 1339 aa21.19■□□□□ 0.98
EBF1-205ENST00000518836 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
EBF1-205ENST00000518836 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
EBF1-205ENST00000518836 ERICH6Q7L0X2 663 aa21.14■□□□□ 0.97
EBF1-205ENST00000518836 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
EBF1-205ENST00000518836 CCNB3Q8WWL7 1395 aa21.11■□□□□ 0.97
EBF1-205ENST00000518836 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
EBF1-205ENST00000518836 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
EBF1-205ENST00000518836 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
EBF1-205ENST00000518836 BICRAQ9NZM4 1560 aa21.08■□□□□ 0.97
EBF1-205ENST00000518836 FANCD2Q9BXW9 1451 aa21.06■□□□□ 0.96
EBF1-205ENST00000518836 ZNF326Q5BKZ1 582 aaKnown RBP21.04■□□□□ 0.96
EBF1-205ENST00000518836 GTF3C3Q9Y5Q9 886 aa21.04■□□□□ 0.96
EBF1-205ENST00000518836 CHIC2Q9UKJ5 165 aa21.02■□□□□ 0.96
EBF1-205ENST00000518836 FMN1Q68DA7 1419 aa21.01■□□□□ 0.95
EBF1-205ENST00000518836 KIF21BO75037 1637 aa20.99■□□□□ 0.95
EBF1-205ENST00000518836 CFTRP13569 1480 aa20.97■□□□□ 0.95
EBF1-205ENST00000518836 TSPY4P0CV99 314 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms