RNA–Protein interactions for RNA: ENST00000518700.4

MSC-AS1-203, MSC antisense RNA 1, humanhuman

TSL 5

Gene MSC-AS1, Length 470 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-203ENST00000518700 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
MSC-AS1-203ENST00000518700 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
MSC-AS1-203ENST00000518700 PHF23Q9BUL5 403 aaPredicted RBP14.62□□□□□ -0.07
MSC-AS1-203ENST00000518700 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
MSC-AS1-203ENST00000518700 PLPPR3Q6T4P5 718 aa13.58□□□□□ -0.24
MSC-AS1-203ENST00000518700 FOXD1Q16676 465 aa12.85□□□□□ -0.35
MSC-AS1-203ENST00000518700 ADRA2BP18089 450 aa12.81□□□□□ -0.36
MSC-AS1-203ENST00000518700 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
MSC-AS1-203ENST00000518700 KCNA4P22459 653 aa12.36□□□□□ -0.43
MSC-AS1-203ENST00000518700 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
MSC-AS1-203ENST00000518700 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
MSC-AS1-203ENST00000518700 PPP4R3CPQ6ZMV5 832 aa12.07□□□□□ -0.48
MSC-AS1-203ENST00000518700 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
MSC-AS1-203ENST00000518700 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
MSC-AS1-203ENST00000518700 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
MSC-AS1-203ENST00000518700 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
MSC-AS1-203ENST00000518700 MSH5O43196 834 aa11.59□□□□□ -0.55
MSC-AS1-203ENST00000518700 CNKSR2Q8WXI2 1034 aa11.59□□□□□ -0.55
MSC-AS1-203ENST00000518700 SCAF1Q9H7N4 1312 aaKnown RBP11.57□□□□□ -0.56
MSC-AS1-203ENST00000518700 MAPK8IP2Q13387 824 aaPredicted RBP11.46□□□□□ -0.57
MSC-AS1-203ENST00000518700 ZBTB22O15209 634 aa11.4□□□□□ -0.58
MSC-AS1-203ENST00000518700 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
MSC-AS1-203ENST00000518700 DNAJC5BQ9UF47 199 aa11.2□□□□□ -0.62
MSC-AS1-203ENST00000518700 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
MSC-AS1-203ENST00000518700 NISCHQ9Y2I1 1504 aa11.18□□□□□ -0.62
MSC-AS1-203ENST00000518700 DMRT2Q9Y5R5 561 aa11.14□□□□□ -0.63
MSC-AS1-203ENST00000518700 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
MSC-AS1-203ENST00000518700 SLC4A2P04920 1241 aa10.97□□□□□ -0.65
MSC-AS1-203ENST00000518700 MYCNP04198 464 aaPredicted RBP10.8□□□□□ -0.68
MSC-AS1-203ENST00000518700 ATXN8OSP0DMR3 200 aa10.7□□□□□ -0.7
MSC-AS1-203ENST00000518700 DCAF8L1A6NGE4 600 aa10.69□□□□□ -0.7
MSC-AS1-203ENST00000518700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.71
MSC-AS1-203ENST00000518700 FKBP8Q14318 412 aa10.55□□□□□ -0.72
MSC-AS1-203ENST00000518700 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
MSC-AS1-203ENST00000518700 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
MSC-AS1-203ENST00000518700 RTN4Q9NQC3 1192 aaKnown RBP10.44□□□□□ -0.74
MSC-AS1-203ENST00000518700 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
MSC-AS1-203ENST00000518700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.41□□□□□ -0.74
MSC-AS1-203ENST00000518700 HNRNPUL2Q1KMD3 747 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-203ENST00000518700 AMER1Q5JTC6 1135 aaPredicted RBP10.38□□□□□ -0.75
MSC-AS1-203ENST00000518700 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
MSC-AS1-203ENST00000518700 APLP2Q06481 763 aa10.19□□□□□ -0.78
MSC-AS1-203ENST00000518700 SLC24A1O60721 1099 aa10.16□□□□□ -0.78
MSC-AS1-203ENST00000518700 MKRN4PQ13434 485 aaPredicted RBP10.09□□□□□ -0.79
MSC-AS1-203ENST00000518700 SPINK5Q9NQ38 1064 aaPredicted RBP10.09□□□□□ -0.79
MSC-AS1-203ENST00000518700 TRHP20396 242 aaPredicted RBP10.08□□□□□ -0.8
MSC-AS1-203ENST00000518700 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
MSC-AS1-203ENST00000518700 RNF39Q9H2S5 420 aa10.01□□□□□ -0.81
MSC-AS1-203ENST00000518700 CAPN15O75808 1086 aa10□□□□□ -0.81
MSC-AS1-203ENST00000518700 POLA2Q14181 598 aa9.99□□□□□ -0.81
MSC-AS1-203ENST00000518700 FBLN2P98095 1184 aa9.98□□□□□ -0.81
MSC-AS1-203ENST00000518700 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
MSC-AS1-203ENST00000518700 PROM2Q8N271 834 aa9.93□□□□□ -0.82
MSC-AS1-203ENST00000518700 CCDC180Q9P1Z9 1646 aa9.89□□□□□ -0.83
MSC-AS1-203ENST00000518700 ABCB7O75027 752 aa9.89□□□□□ -0.83
MSC-AS1-203ENST00000518700 C1QBPQ07021 282 aaKnown RBP9.88□□□□□ -0.83
MSC-AS1-203ENST00000518700 VASPP50552 380 aaPredicted RBP9.87□□□□□ -0.83
MSC-AS1-203ENST00000518700 POTEDQ86YR6 584 aa9.8□□□□□ -0.84
MSC-AS1-203ENST00000518700 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
MSC-AS1-203ENST00000518700 IFNLR1Q8IU57 520 aaPredicted RBP9.78□□□□□ -0.84
MSC-AS1-203ENST00000518700 DSG3P32926 999 aa9.7□□□□□ -0.86
MSC-AS1-203ENST00000518700 DCAF8L2P0C7V8 631 aa9.66□□□□□ -0.86
MSC-AS1-203ENST00000518700 OSCARQ8IYS5 282 aa9.66□□□□□ -0.86
MSC-AS1-203ENST00000518700 ZNF692Q9BU19 519 aaPredicted RBP9.66□□□□□ -0.86
MSC-AS1-203ENST00000518700 ABCC9O60706 1549 aa9.65□□□□□ -0.86
MSC-AS1-203ENST00000518700 PKD2Q13563 968 aa9.63□□□□□ -0.87
MSC-AS1-203ENST00000518700 PLCB2Q00722 1185 aa9.6□□□□□ -0.87
MSC-AS1-203ENST00000518700 KLHL34Q8N239 644 aa9.6□□□□□ -0.87
MSC-AS1-203ENST00000518700 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
MSC-AS1-203ENST00000518700 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
MSC-AS1-203ENST00000518700 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
MSC-AS1-203ENST00000518700 SSUH2Q9Y2M2 353 aa9.59□□□□□ -0.87
MSC-AS1-203ENST00000518700 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
MSC-AS1-203ENST00000518700 SPOCK2Q92563 424 aa9.56□□□□□ -0.88
MSC-AS1-203ENST00000518700 STAG3Q9UJ98 1225 aa9.54□□□□□ -0.88
MSC-AS1-203ENST00000518700 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
MSC-AS1-203ENST00000518700 HAP1P54257 671 aaPredicted RBP9.51□□□□□ -0.89
MSC-AS1-203ENST00000518700 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
MSC-AS1-203ENST00000518700 MIER1Q8N108 512 aa9.48□□□□□ -0.89
MSC-AS1-203ENST00000518700 CACNB1Q02641 598 aaPredicted RBP9.43□□□□□ -0.9
MSC-AS1-203ENST00000518700 RGL2O15211 777 aa9.4□□□□□ -0.9
MSC-AS1-203ENST00000518700 NPM1P06748 294 aaKnown RBP eCLIP9.4□□□□□ -0.9
MSC-AS1-203ENST00000518700 CIZ1Q9ULV3 898 aaPredicted RBP9.37□□□□□ -0.91
MSC-AS1-203ENST00000518700 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
MSC-AS1-203ENST00000518700 NACADO15069 1562 aa9.35□□□□□ -0.91
MSC-AS1-203ENST00000518700 PLEKHG5O94827 1062 aa9.34□□□□□ -0.91
MSC-AS1-203ENST00000518700 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.34□□□□□ -0.91
MSC-AS1-203ENST00000518700 RB1CC1Q8TDY2 1594 aa9.33□□□□□ -0.92
MSC-AS1-203ENST00000518700 MYO15BQ96JP2 1530 aa9.33□□□□□ -0.92
MSC-AS1-203ENST00000518700 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
MSC-AS1-203ENST00000518700 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
MSC-AS1-203ENST00000518700 ZBTB47Q9UFB7 747 aaPredicted RBP9.32□□□□□ -0.92
MSC-AS1-203ENST00000518700 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
MSC-AS1-203ENST00000518700 DCAF1Q9Y4B6 1507 aa9.29□□□□□ -0.92
MSC-AS1-203ENST00000518700 ZCCHC6Q5VYS8 1495 aaKnown RBP9.28□□□□□ -0.92
MSC-AS1-203ENST00000518700 CHGAP10645 457 aaKnown RBP9.26□□□□□ -0.93
MSC-AS1-203ENST00000518700 KDM2AQ9Y2K7 1162 aa9.25□□□□□ -0.93
MSC-AS1-203ENST00000518700 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
MSC-AS1-203ENST00000518700 BCANQ96GW7 911 aa9.22□□□□□ -0.93
MSC-AS1-203ENST00000518700 NUBP1P53384 320 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms