RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
LINC00461-216ENST00000515885 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
LINC00461-216ENST00000515885 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
LINC00461-216ENST00000515885 PLPPR3Q6T4P5 718 aa21.11■□□□□ 0.97
LINC00461-216ENST00000515885 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
LINC00461-216ENST00000515885 ADRA2BP18089 450 aa19.88■□□□□ 0.77
LINC00461-216ENST00000515885 KCNA4P22459 653 aa19.65■□□□□ 0.74
LINC00461-216ENST00000515885 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
LINC00461-216ENST00000515885 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
LINC00461-216ENST00000515885 FOXD1Q16676 465 aa19.42■□□□□ 0.7
LINC00461-216ENST00000515885 CSRNP3Q8WYN3 585 aa18.9■□□□□ 0.62
LINC00461-216ENST00000515885 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
LINC00461-216ENST00000515885 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
LINC00461-216ENST00000515885 PIAS4Q8N2W9 510 aaPredicted RBP18.53■□□□□ 0.56
LINC00461-216ENST00000515885 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
LINC00461-216ENST00000515885 NPM3O75607 178 aaKnown RBP18.37■□□□□ 0.53
LINC00461-216ENST00000515885 ZBTB22O15209 634 aa18.15■□□□□ 0.5
LINC00461-216ENST00000515885 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
LINC00461-216ENST00000515885 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
LINC00461-216ENST00000515885 FOXD4L1Q9NU39 408 aa17.71■□□□□ 0.43
LINC00461-216ENST00000515885 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
LINC00461-216ENST00000515885 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
LINC00461-216ENST00000515885 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
LINC00461-216ENST00000515885 RTN4Q9NQC3 1192 aaKnown RBP17.44■□□□□ 0.38
LINC00461-216ENST00000515885 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
LINC00461-216ENST00000515885 MSH5O43196 834 aa17.36■□□□□ 0.37
LINC00461-216ENST00000515885 AMER1Q5JTC6 1135 aaPredicted RBP17.33■□□□□ 0.36
LINC00461-216ENST00000515885 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
LINC00461-216ENST00000515885 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
LINC00461-216ENST00000515885 FKBP8Q14318 412 aa16.97■□□□□ 0.31
LINC00461-216ENST00000515885 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
LINC00461-216ENST00000515885 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
LINC00461-216ENST00000515885 MYCNP04198 464 aaPredicted RBP16.89■□□□□ 0.29
LINC00461-216ENST00000515885 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
LINC00461-216ENST00000515885 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
LINC00461-216ENST00000515885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC00461-216ENST00000515885 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
LINC00461-216ENST00000515885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
LINC00461-216ENST00000515885 HNRNPUL2Q1KMD3 747 aaKnown RBP16.14■□□□□ 0.17
LINC00461-216ENST00000515885 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
LINC00461-216ENST00000515885 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
LINC00461-216ENST00000515885 PLCB2Q00722 1185 aa15.99■□□□□ 0.15
LINC00461-216ENST00000515885 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
LINC00461-216ENST00000515885 FBXO3Q9UK99 471 aa15.96■□□□□ 0.15
LINC00461-216ENST00000515885 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
LINC00461-216ENST00000515885 PROM2Q8N271 834 aa15.83■□□□□ 0.12
LINC00461-216ENST00000515885 VASPP50552 380 aaPredicted RBP15.8■□□□□ 0.12
LINC00461-216ENST00000515885 MKRN4PQ13434 485 aaPredicted RBP15.8■□□□□ 0.12
LINC00461-216ENST00000515885 ABCC9O60706 1549 aa15.79■□□□□ 0.12
LINC00461-216ENST00000515885 HAP1P54257 671 aaPredicted RBP15.76■□□□□ 0.11
LINC00461-216ENST00000515885 IFNLR1Q8IU57 520 aaPredicted RBP15.73■□□□□ 0.11
LINC00461-216ENST00000515885 APLP2Q06481 763 aa15.68■□□□□ 0.1
LINC00461-216ENST00000515885 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
LINC00461-216ENST00000515885 PKD2Q13563 968 aa15.63■□□□□ 0.09
LINC00461-216ENST00000515885 BCANQ96GW7 911 aa15.59■□□□□ 0.09
LINC00461-216ENST00000515885 PRKCSHP14314 528 aaPredicted RBP15.57■□□□□ 0.08
LINC00461-216ENST00000515885 FBLN2P98095 1184 aa15.54■□□□□ 0.08
LINC00461-216ENST00000515885 VSIG10Q8N0Z9 540 aa15.53■□□□□ 0.08
LINC00461-216ENST00000515885 TAOK2Q9UL54 1235 aa15.47■□□□□ 0.07
LINC00461-216ENST00000515885 POLA2Q14181 598 aa15.4■□□□□ 0.06
LINC00461-216ENST00000515885 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
LINC00461-216ENST00000515885 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
LINC00461-216ENST00000515885 KDM2AQ9Y2K7 1162 aa15.37■□□□□ 0.05
LINC00461-216ENST00000515885 BBXQ8WY36 941 aaPredicted RBP15.33■□□□□ 0.04
LINC00461-216ENST00000515885 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC00461-216ENST00000515885 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
LINC00461-216ENST00000515885 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.29■□□□□ 0.04
LINC00461-216ENST00000515885 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
LINC00461-216ENST00000515885 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
LINC00461-216ENST00000515885 PAXIP1Q6ZW49 1069 aaPredicted RBP15.26■□□□□ 0.03
LINC00461-216ENST00000515885 TPRNQ4KMQ1 711 aa15.23■□□□□ 0.03
LINC00461-216ENST00000515885 KLHL34Q8N239 644 aa15.23■□□□□ 0.03
LINC00461-216ENST00000515885 CFAP44Q96MT7 982 aa15.22■□□□□ 0.03
LINC00461-216ENST00000515885 CAPN15O75808 1086 aa15.18■□□□□ 0.02
LINC00461-216ENST00000515885 RGL2O15211 777 aa15.15■□□□□ 0.02
LINC00461-216ENST00000515885 ZBTB12Q9Y330 459 aaPredicted RBP15.11■□□□□ 0.01
LINC00461-216ENST00000515885 TSHZ2Q9NRE2 1034 aa15.08■□□□□ 0
LINC00461-216ENST00000515885 SPRYD3Q8NCJ5 442 aa15.06■□□□□ 0
LINC00461-216ENST00000515885 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
LINC00461-216ENST00000515885 ABCB7O75027 752 aa15.05■□□□□ -0
LINC00461-216ENST00000515885 RNF39Q9H2S5 420 aa15.05■□□□□ -0
LINC00461-216ENST00000515885 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
LINC00461-216ENST00000515885 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
LINC00461-216ENST00000515885 CHGAP10645 457 aaKnown RBP14.92□□□□□ -0.02
LINC00461-216ENST00000515885 MIER1Q8N108 512 aa14.92□□□□□ -0.02
LINC00461-216ENST00000515885 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
LINC00461-216ENST00000515885 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
LINC00461-216ENST00000515885 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
LINC00461-216ENST00000515885 CIZ1Q9ULV3 898 aaPredicted RBP14.86□□□□□ -0.03
LINC00461-216ENST00000515885 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
LINC00461-216ENST00000515885 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
LINC00461-216ENST00000515885 SPDYE2Q495Y8 402 aa14.85□□□□□ -0.03
LINC00461-216ENST00000515885 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
LINC00461-216ENST00000515885 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
LINC00461-216ENST00000515885 RB1CC1Q8TDY2 1594 aa14.82□□□□□ -0.04
LINC00461-216ENST00000515885 NBR1Q14596 966 aa14.75□□□□□ -0.05
LINC00461-216ENST00000515885 HS6ST3Q8IZP7 471 aa14.75□□□□□ -0.05
LINC00461-216ENST00000515885 DSG3P32926 999 aa14.72□□□□□ -0.05
LINC00461-216ENST00000515885 ZBTB47Q9UFB7 747 aaPredicted RBP14.71□□□□□ -0.05
LINC00461-216ENST00000515885 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms