RNA–Protein interactions for RNA: ENST00000515324.1

PDE4D-224, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-224ENST00000515324 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
PDE4D-224ENST00000515324 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
PDE4D-224ENST00000515324 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
PDE4D-224ENST00000515324 SENP3Q9H4L4 574 aaPredicted RBP15.29■□□□□ 0.04
PDE4D-224ENST00000515324 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
PDE4D-224ENST00000515324 FOXD1Q16676 465 aa14.07□□□□□ -0.16
PDE4D-224ENST00000515324 ADRA2BP18089 450 aa14□□□□□ -0.17
PDE4D-224ENST00000515324 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
PDE4D-224ENST00000515324 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
PDE4D-224ENST00000515324 KCNA4P22459 653 aa13.51□□□□□ -0.25
PDE4D-224ENST00000515324 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
PDE4D-224ENST00000515324 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
PDE4D-224ENST00000515324 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
PDE4D-224ENST00000515324 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
PDE4D-224ENST00000515324 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
PDE4D-224ENST00000515324 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
PDE4D-224ENST00000515324 MSH5O43196 834 aa12.86□□□□□ -0.35
PDE4D-224ENST00000515324 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
PDE4D-224ENST00000515324 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
PDE4D-224ENST00000515324 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
PDE4D-224ENST00000515324 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
PDE4D-224ENST00000515324 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
PDE4D-224ENST00000515324 ZBTB22O15209 634 aa12.35□□□□□ -0.43
PDE4D-224ENST00000515324 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
PDE4D-224ENST00000515324 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
PDE4D-224ENST00000515324 DNAJC5BQ9UF47 199 aa12.14□□□□□ -0.47
PDE4D-224ENST00000515324 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
PDE4D-224ENST00000515324 DCAF8L1A6NGE4 600 aa11.97□□□□□ -0.49
PDE4D-224ENST00000515324 SLC4A2P04920 1241 aa11.92□□□□□ -0.5
PDE4D-224ENST00000515324 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
PDE4D-224ENST00000515324 CCDC180Q9P1Z9 1646 aa11.8□□□□□ -0.52
PDE4D-224ENST00000515324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.52
PDE4D-224ENST00000515324 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
PDE4D-224ENST00000515324 FKBP8Q14318 412 aa11.63□□□□□ -0.55
PDE4D-224ENST00000515324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-224ENST00000515324 HNRNPUL2Q1KMD3 747 aaKnown RBP11.62□□□□□ -0.55
PDE4D-224ENST00000515324 ABCC9O60706 1549 aa11.61□□□□□ -0.55
PDE4D-224ENST00000515324 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
PDE4D-224ENST00000515324 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
PDE4D-224ENST00000515324 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
PDE4D-224ENST00000515324 AMER1Q5JTC6 1135 aaPredicted RBP11.46□□□□□ -0.57
PDE4D-224ENST00000515324 APLP2Q06481 763 aa11.44□□□□□ -0.58
PDE4D-224ENST00000515324 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
PDE4D-224ENST00000515324 ZNF219Q9P2Y4 722 aaPredicted RBP11.29□□□□□ -0.6
PDE4D-224ENST00000515324 DCAF8L2P0C7V8 631 aa11.24□□□□□ -0.61
PDE4D-224ENST00000515324 TRHP20396 242 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-224ENST00000515324 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
PDE4D-224ENST00000515324 POTEDQ86YR6 584 aa11.16□□□□□ -0.62
PDE4D-224ENST00000515324 FBLN2P98095 1184 aa11.15□□□□□ -0.62
PDE4D-224ENST00000515324 CAPN15O75808 1086 aa11.14□□□□□ -0.63
PDE4D-224ENST00000515324 RB1CC1Q8TDY2 1594 aa11.12□□□□□ -0.63
PDE4D-224ENST00000515324 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
PDE4D-224ENST00000515324 NACADO15069 1562 aa11.11□□□□□ -0.63
PDE4D-224ENST00000515324 ZCCHC6Q5VYS8 1495 aaKnown RBP11.08□□□□□ -0.64
PDE4D-224ENST00000515324 FBXO3Q9UK99 471 aa11.08□□□□□ -0.64
PDE4D-224ENST00000515324 SPINK5Q9NQ38 1064 aaPredicted RBP11.06□□□□□ -0.64
PDE4D-224ENST00000515324 POLA2Q14181 598 aa11.02□□□□□ -0.65
PDE4D-224ENST00000515324 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
PDE4D-224ENST00000515324 DCAF1Q9Y4B6 1507 aa10.99□□□□□ -0.65
PDE4D-224ENST00000515324 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
PDE4D-224ENST00000515324 RNF39Q9H2S5 420 aa10.97□□□□□ -0.65
PDE4D-224ENST00000515324 ABCB7O75027 752 aa10.95□□□□□ -0.66
PDE4D-224ENST00000515324 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
PDE4D-224ENST00000515324 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
PDE4D-224ENST00000515324 UNC13AQ9UPW8 1703 aa10.92□□□□□ -0.66
PDE4D-224ENST00000515324 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDE4D-224ENST00000515324 VASPP50552 380 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-224ENST00000515324 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
PDE4D-224ENST00000515324 SCRIBQ14160 1630 aa10.82□□□□□ -0.68
PDE4D-224ENST00000515324 PROM2Q8N271 834 aa10.77□□□□□ -0.69
PDE4D-224ENST00000515324 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
PDE4D-224ENST00000515324 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
PDE4D-224ENST00000515324 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
PDE4D-224ENST00000515324 OSCARQ8IYS5 282 aa10.66□□□□□ -0.7
PDE4D-224ENST00000515324 PLCD3Q8N3E9 789 aa10.64□□□□□ -0.71
PDE4D-224ENST00000515324 DSG3P32926 999 aa10.63□□□□□ -0.71
PDE4D-224ENST00000515324 SHROOM4Q9ULL8 1493 aa10.61□□□□□ -0.71
PDE4D-224ENST00000515324 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
PDE4D-224ENST00000515324 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
PDE4D-224ENST00000515324 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
PDE4D-224ENST00000515324 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
PDE4D-224ENST00000515324 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
PDE4D-224ENST00000515324 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
PDE4D-224ENST00000515324 HAP1P54257 671 aaPredicted RBP10.56□□□□□ -0.72
PDE4D-224ENST00000515324 MIER1Q8N108 512 aa10.55□□□□□ -0.72
PDE4D-224ENST00000515324 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
PDE4D-224ENST00000515324 ECM2O94769 699 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-224ENST00000515324 CACNB1Q02641 598 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-224ENST00000515324 EIF4G1Q04637 1599 aaKnown RBP10.52□□□□□ -0.73
PDE4D-224ENST00000515324 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
PDE4D-224ENST00000515324 CC2D2AQ9P2K1 1620 aa10.49□□□□□ -0.73
PDE4D-224ENST00000515324 PKD2Q13563 968 aa10.49□□□□□ -0.73
PDE4D-224ENST00000515324 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.44□□□□□ -0.74
PDE4D-224ENST00000515324 CIZ1Q9ULV3 898 aaPredicted RBP10.44□□□□□ -0.74
PDE4D-224ENST00000515324 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
PDE4D-224ENST00000515324 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
PDE4D-224ENST00000515324 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
PDE4D-224ENST00000515324 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
PDE4D-224ENST00000515324 PAXIP1Q6ZW49 1069 aaPredicted RBP10.32□□□□□ -0.76
PDE4D-224ENST00000515324 BBXQ8WY36 941 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms