RNA–Protein interactions for RNA: ENST00000515253.5

WDR41-227, Transcript of WD repeat domain 41, humanhuman

TSL 2

Gene WDR41, Length 1,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR41-227ENST00000515253 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
WDR41-227ENST00000515253 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
WDR41-227ENST00000515253 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
WDR41-227ENST00000515253 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.45
WDR41-227ENST00000515253 FOXD1Q16676 465 aa16.96■□□□□ 0.31
WDR41-227ENST00000515253 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
WDR41-227ENST00000515253 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
WDR41-227ENST00000515253 MSH5O43196 834 aa15.83■□□□□ 0.12
WDR41-227ENST00000515253 PIAS4Q8N2W9 510 aaPredicted RBP15.71■□□□□ 0.11
WDR41-227ENST00000515253 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
WDR41-227ENST00000515253 ADRA2BP18089 450 aa15.58■□□□□ 0.09
WDR41-227ENST00000515253 KCNA4P22459 653 aa14.6□□□□□ -0.07
WDR41-227ENST00000515253 MAPK8IP2Q13387 824 aaPredicted RBP14.46□□□□□ -0.09
WDR41-227ENST00000515253 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
WDR41-227ENST00000515253 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
WDR41-227ENST00000515253 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
WDR41-227ENST00000515253 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.16
WDR41-227ENST00000515253 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
WDR41-227ENST00000515253 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
WDR41-227ENST00000515253 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
WDR41-227ENST00000515253 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.19
WDR41-227ENST00000515253 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
WDR41-227ENST00000515253 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
WDR41-227ENST00000515253 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
WDR41-227ENST00000515253 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
WDR41-227ENST00000515253 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
WDR41-227ENST00000515253 ZBTB22O15209 634 aa13.49□□□□□ -0.25
WDR41-227ENST00000515253 RNF216Q9NWF9 866 aaPredicted RBP13.38□□□□□ -0.27
WDR41-227ENST00000515253 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
WDR41-227ENST00000515253 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
WDR41-227ENST00000515253 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
WDR41-227ENST00000515253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.331e-7■■■■□ 23.9
WDR41-227ENST00000515253 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
WDR41-227ENST00000515253 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
WDR41-227ENST00000515253 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.38
WDR41-227ENST00000515253 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
WDR41-227ENST00000515253 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
WDR41-227ENST00000515253 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
WDR41-227ENST00000515253 DSG3P32926 999 aa12.62□□□□□ -0.39
WDR41-227ENST00000515253 CAPN15O75808 1086 aa12.61□□□□□ -0.39
WDR41-227ENST00000515253 POTEHQ6S545 545 aa12.59□□□□□ -0.39
WDR41-227ENST00000515253 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
WDR41-227ENST00000515253 FKBP8Q14318 412 aa12.47□□□□□ -0.41
WDR41-227ENST00000515253 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
WDR41-227ENST00000515253 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
WDR41-227ENST00000515253 ABCB7O75027 752 aa12.37□□□□□ -0.43
WDR41-227ENST00000515253 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
WDR41-227ENST00000515253 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.44
WDR41-227ENST00000515253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.45
WDR41-227ENST00000515253 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.45
WDR41-227ENST00000515253 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
WDR41-227ENST00000515253 ABCC9O60706 1549 aa12.23□□□□□ -0.45
WDR41-227ENST00000515253 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
WDR41-227ENST00000515253 APLP2Q06481 763 aa12.08□□□□□ -0.48
WDR41-227ENST00000515253 POLA2Q14181 598 aa11.94□□□□□ -0.5
WDR41-227ENST00000515253 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
WDR41-227ENST00000515253 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
WDR41-227ENST00000515253 RBM42Q9BTD8 480 aaKnown RBP11.89□□□□□ -0.51
WDR41-227ENST00000515253 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
WDR41-227ENST00000515253 PROM2Q8N271 834 aa11.83□□□□□ -0.52
WDR41-227ENST00000515253 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
WDR41-227ENST00000515253 FBLN2P98095 1184 aa11.71□□□□□ -0.53
WDR41-227ENST00000515253 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
WDR41-227ENST00000515253 CCDC180Q9P1Z9 1646 aa11.66□□□□□ -0.54
WDR41-227ENST00000515253 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
WDR41-227ENST00000515253 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
WDR41-227ENST00000515253 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
WDR41-227ENST00000515253 REM2Q8IYK8 340 aaPredicted RBP11.58□□□□□ -0.56
WDR41-227ENST00000515253 PIP4P2Q8N4L2 257 aa11.58□□□□□ -0.56
WDR41-227ENST00000515253 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
WDR41-227ENST00000515253 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
WDR41-227ENST00000515253 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
WDR41-227ENST00000515253 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
WDR41-227ENST00000515253 PKD2Q13563 968 aa11.48□□□□□ -0.57
WDR41-227ENST00000515253 HAX1O00165 279 aa11.45□□□□□ -0.58
WDR41-227ENST00000515253 EVX2Q03828 476 aa11.42□□□□□ -0.58
WDR41-227ENST00000515253 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
WDR41-227ENST00000515253 DNAJC5Q9H3Z4 198 aa11.4□□□□□ -0.59
WDR41-227ENST00000515253 RB1CC1Q8TDY2 1594 aa11.37□□□□□ -0.59
WDR41-227ENST00000515253 DCAF8L2P0C7V8 631 aa11.34□□□□□ -0.59
WDR41-227ENST00000515253 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
WDR41-227ENST00000515253 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
WDR41-227ENST00000515253 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
WDR41-227ENST00000515253 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
WDR41-227ENST00000515253 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
WDR41-227ENST00000515253 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
WDR41-227ENST00000515253 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
WDR41-227ENST00000515253 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
WDR41-227ENST00000515253 KLHL34Q8N239 644 aa11.27□□□□□ -0.61
WDR41-227ENST00000515253 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
WDR41-227ENST00000515253 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
WDR41-227ENST00000515253 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
WDR41-227ENST00000515253 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
WDR41-227ENST00000515253 UNC13AQ9UPW8 1703 aa11.17□□□□□ -0.62
WDR41-227ENST00000515253 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
WDR41-227ENST00000515253 BBXQ8WY36 941 aaPredicted RBP11.17□□□□□ -0.62
WDR41-227ENST00000515253 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
WDR41-227ENST00000515253 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
WDR41-227ENST00000515253 MIER1Q8N108 512 aa11.14□□□□□ -0.63
WDR41-227ENST00000515253 RGL2O15211 777 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms