RNA–Protein interactions for RNA: ENST00000513546.3

PPM1K-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1K, humanhuman

Gene PPM1K, Length 4,777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1K-208ENST00000513546 NISCHQ9Y2I1 1504 aa11.75□□□□□ -0.53
PPM1K-208ENST00000513546 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
PPM1K-208ENST00000513546 SHROOM4Q9ULL8 1493 aa10.78□□□□□ -0.68
PPM1K-208ENST00000513546 SUPT5HO00267 1087 aaKnown RBP10.78□□□□□ -0.68
PPM1K-208ENST00000513546 EHMT2Q96KQ7 1210 aa10.17□□□□□ -0.78
PPM1K-208ENST00000513546 PCGF6Q9BYE7 350 aa10.16□□□□□ -0.78
PPM1K-208ENST00000513546 FAM9AQ8IZU1 332 aaPredicted RBP10.07□□□□□ -0.8
PPM1K-208ENST00000513546 CHIC1Q5VXU3 224 aa10.04□□□□□ -0.8
PPM1K-208ENST00000513546 TRIM41Q8WV44 630 aa9.96□□□□□ -0.81
PPM1K-208ENST00000513546 LOC105371045A0A1W2PR82 267 aa9.92□□□□□ -0.82
PPM1K-208ENST00000513546 HRCP23327 699 aa9.89□□□□□ -0.83
PPM1K-208ENST00000513546 ZCCHC6Q5VYS8 1495 aaKnown RBP9.84□□□□□ -0.83
PPM1K-208ENST00000513546 TTBK1Q5TCY1 1321 aaPredicted RBP9.83□□□□□ -0.84
PPM1K-208ENST00000513546 TRIM26Q12899 539 aaPredicted RBP9.78□□□□□ -0.84
PPM1K-208ENST00000513546 PPARGC1BQ86YN6 1023 aaKnown RBP9.76□□□□□ -0.85
PPM1K-208ENST00000513546 ZEB1P37275 1124 aaPredicted RBP9.74□□□□□ -0.85
PPM1K-208ENST00000513546 CCER1Q8TC90 406 aaPredicted RBP9.69□□□□□ -0.86
PPM1K-208ENST00000513546 CCDC180Q9P1Z9 1646 aa9.68□□□□□ -0.86
PPM1K-208ENST00000513546 APLP2Q06481 763 aa9.67□□□□□ -0.86
PPM1K-208ENST00000513546 UBTFP17480 764 aaKnown RBP9.66□□□□□ -0.86
PPM1K-208ENST00000513546 RANGAP1P46060 587 aaPredicted RBP9.65□□□□□ -0.87
PPM1K-208ENST00000513546 ABCC9O60706 1549 aa9.64□□□□□ -0.87
PPM1K-208ENST00000513546 MYO15BQ96JP2 1530 aa9.62□□□□□ -0.87
PPM1K-208ENST00000513546 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
PPM1K-208ENST00000513546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.5□□□□□ -0.89
PPM1K-208ENST00000513546 CENPBP07199 599 aaPredicted RBP9.48□□□□□ -0.89
PPM1K-208ENST00000513546 DCAF1Q9Y4B6 1507 aa9.48□□□□□ -0.89
PPM1K-208ENST00000513546 PABPN1Q86U42 306 aaKnown RBP eCLIP9.46□□□□□ -0.9
PPM1K-208ENST00000513546 RSF1Q96T23 1441 aaPredicted RBP9.42□□□□□ -0.9
PPM1K-208ENST00000513546 HNRNPUL2Q1KMD3 747 aaKnown RBP9.42□□□□□ -0.9
PPM1K-208ENST00000513546 YTHDC1Q96MU7 727 aaKnown RBP9.41□□□□□ -0.9
PPM1K-208ENST00000513546 ATP1B4Q9UN42 357 aaPredicted RBP9.37□□□□□ -0.91
PPM1K-208ENST00000513546 DIEXFQ68CQ4 756 aaKnown RBP9.33□□□□□ -0.92
PPM1K-208ENST00000513546 PELP1Q8IZL8 1130 aaKnown RBP9.32□□□□□ -0.92
PPM1K-208ENST00000513546 CSRNP3Q8WYN3 585 aa9.32□□□□□ -0.92
PPM1K-208ENST00000513546 ITGAEP38570 1179 aa9.31□□□□□ -0.92
PPM1K-208ENST00000513546 CECR2Q9BXF3 1484 aa9.26□□□□□ -0.93
PPM1K-208ENST00000513546 RB1CC1Q8TDY2 1594 aa9.22□□□□□ -0.93
PPM1K-208ENST00000513546 NACADO15069 1562 aa9.21□□□□□ -0.94
PPM1K-208ENST00000513546 GTF3C3Q9Y5Q9 886 aa9.18□□□□□ -0.94
PPM1K-208ENST00000513546 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
PPM1K-208ENST00000513546 MROH2BQ7Z745 1585 aa9.16□□□□□ -0.94
PPM1K-208ENST00000513546 ACIN1Q9UKV3 1341 aaKnown RBP9.14□□□□□ -0.95
PPM1K-208ENST00000513546 CEP162Q5TB80 1403 aa9.12□□□□□ -0.95
PPM1K-208ENST00000513546 FAM50AQ14320 339 aaKnown RBP9.1□□□□□ -0.95
PPM1K-208ENST00000513546 BAZ1AQ9NRL2 1556 aaPredicted RBP9.1□□□□□ -0.95
PPM1K-208ENST00000513546 SCAF1Q9H7N4 1312 aaKnown RBP9.09□□□□□ -0.95
PPM1K-208ENST00000513546 NEUROD1Q13562 356 aa9.08□□□□□ -0.96
PPM1K-208ENST00000513546 NEFLP07196 543 aa9.07□□□□□ -0.96
PPM1K-208ENST00000513546 SOGA1O94964 1423 aa9.06□□□□□ -0.96
PPM1K-208ENST00000513546 WRNQ14191 1432 aaPredicted RBP eCLIP9.06□□□□□ -0.96
PPM1K-208ENST00000513546 CLIP1P30622 1438 aa9.05□□□□□ -0.96
PPM1K-208ENST00000513546 TNIKQ9UKE5 1360 aa9.05□□□□□ -0.96
PPM1K-208ENST00000513546 EEA1Q15075 1411 aa9.05□□□□□ -0.96
PPM1K-208ENST00000513546 WIZO95785 1651 aa9.05□□□□□ -0.96
PPM1K-208ENST00000513546 P3H3Q8IVL6 736 aa9.05□□□□□ -0.96
PPM1K-208ENST00000513546 GOLGA3Q08378 1498 aa9.04□□□□□ -0.96
PPM1K-208ENST00000513546 ABCC8Q09428 1581 aa9.04□□□□□ -0.96
PPM1K-208ENST00000513546 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
PPM1K-208ENST00000513546 MIER1Q8N108 512 aa8.98□□□□□ -0.97
PPM1K-208ENST00000513546 BAZ1BQ9UIG0 1483 aaKnown RBP8.97□□□□□ -0.97
PPM1K-208ENST00000513546 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.97
PPM1K-208ENST00000513546 CNGB1Q14028 1251 aaPredicted RBP8.94□□□□□ -0.98
PPM1K-208ENST00000513546 MYT1Q01538 1121 aa8.94□□□□□ -0.98
PPM1K-208ENST00000513546 POLR3GLQ9BT43 218 aa8.94□□□□□ -0.98
PPM1K-208ENST00000513546 TOP2AP11388 1531 aaKnown RBP8.93□□□□□ -0.98
PPM1K-208ENST00000513546 TRIM52Q96A61 297 aa8.93□□□□□ -0.98
PPM1K-208ENST00000513546 BCANQ96GW7 911 aa8.93□□□□□ -0.98
PPM1K-208ENST00000513546 ERICH6Q7L0X2 663 aa8.92□□□□□ -0.98
PPM1K-208ENST00000513546 RUSC2Q8N2Y8 1516 aa8.9□□□□□ -0.98
PPM1K-208ENST00000513546 ARID3CA6NKF2 412 aa8.89□□□□□ -0.99
PPM1K-208ENST00000513546 ANP32CO43423 234 aa8.89□□□□□ -0.99
PPM1K-208ENST00000513546 DDX10Q13206 875 aaKnown RBP8.88□□□□□ -0.99
PPM1K-208ENST00000513546 SMARCA4P51532 1647 aa8.87□□□□□ -0.99
PPM1K-208ENST00000513546 KIF27Q86VH2 1401 aa8.86□□□□□ -0.99
PPM1K-208ENST00000513546 VPS8Q8N3P4 1428 aa8.86□□□□□ -0.99
PPM1K-208ENST00000513546 KANK4Q5T7N3 995 aaPredicted RBP8.84□□□□□ -1
PPM1K-208ENST00000513546 HIRIP3Q9BW71 556 aaPredicted RBP8.84□□□□□ -1
PPM1K-208ENST00000513546 SMARCA2P51531 1590 aa8.81□□□□□ -1
PPM1K-208ENST00000513546 TONSLQ96HA7 1378 aa8.81□□□□□ -1
PPM1K-208ENST00000513546 RAPGEF2Q9Y4G8 1499 aa8.8□□□□□ -1
PPM1K-208ENST00000513546 ZNF326Q5BKZ1 582 aaKnown RBP8.8□□□□□ -1
PPM1K-208ENST00000513546 CHIC2Q9UKJ5 165 aa8.79□□□□□ -1
PPM1K-208ENST00000513546 ATAD2BQ9ULI0 1458 aa8.79□□□□□ -1
PPM1K-208ENST00000513546 FBLN2P98095 1184 aa8.79□□□□□ -1
PPM1K-208ENST00000513546 CLSPNQ9HAW4 1339 aa8.78□□□□□ -1
PPM1K-208ENST00000513546 MTUS2Q5JR59 1369 aa8.78□□□□□ -1
PPM1K-208ENST00000513546 CCNB3Q8WWL7 1395 aa8.78□□□□□ -1
PPM1K-208ENST00000513546 FKBP8Q14318 412 aa8.78□□□□□ -1
PPM1K-208ENST00000513546 SIN3AQ96ST3 1273 aa8.77□□□□□ -1.01
PPM1K-208ENST00000513546 CUX2O14529 1486 aa8.76□□□□□ -1.01
PPM1K-208ENST00000513546 CARMIL1Q5VZK9 1371 aa8.75□□□□□ -1.01
PPM1K-208ENST00000513546 ZNF777Q9ULD5 760 aaPredicted RBP8.74□□□□□ -1.01
PPM1K-208ENST00000513546 HNRNPUQ00839 825 aaKnown RBP eCLIP8.73□□□□□ -1.01
PPM1K-208ENST00000513546 RRP7BPQ9NSQ0 103 aa8.73□□□□□ -1.01
PPM1K-208ENST00000513546 MYT1LQ9UL68 1186 aa8.72□□□□□ -1.01
PPM1K-208ENST00000513546 CDK11AQ9UQ88 783 aaPredicted RBP8.7□□□□□ -1.02
PPM1K-208ENST00000513546 FHAD1B1AJZ9 1412 aa8.68□□□□□ -1.02
PPM1K-208ENST00000513546 RAB3GAP2Q9H2M9 1393 aa8.68□□□□□ -1.02
PPM1K-208ENST00000513546 FAM9BQ8IZU0 186 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms