RNA–Protein interactions for RNA: ENST00000512961.5

COL25A1-207, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-207ENST00000512961 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
COL25A1-207ENST00000512961 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
COL25A1-207ENST00000512961 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
COL25A1-207ENST00000512961 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
COL25A1-207ENST00000512961 FOXD1Q16676 465 aa14.88□□□□□ -0.03
COL25A1-207ENST00000512961 POTEDQ86YR6 584 aa14.8□□□□□ -0.04
COL25A1-207ENST00000512961 MSH5O43196 834 aa14.26□□□□□ -0.13
COL25A1-207ENST00000512961 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
COL25A1-207ENST00000512961 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
COL25A1-207ENST00000512961 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
COL25A1-207ENST00000512961 ADRA2BP18089 450 aa13.34□□□□□ -0.27
COL25A1-207ENST00000512961 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
COL25A1-207ENST00000512961 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
COL25A1-207ENST00000512961 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
COL25A1-207ENST00000512961 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
COL25A1-207ENST00000512961 RNF39Q9H2S5 420 aa12.07□□□□□ -0.48
COL25A1-207ENST00000512961 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
COL25A1-207ENST00000512961 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
COL25A1-207ENST00000512961 C1QBPQ07021 282 aaKnown RBP11.9□□□□□ -0.5
COL25A1-207ENST00000512961 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
COL25A1-207ENST00000512961 DNAJC5BQ9UF47 199 aa11.71□□□□□ -0.53
COL25A1-207ENST00000512961 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
COL25A1-207ENST00000512961 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
COL25A1-207ENST00000512961 POTEHQ6S545 545 aa11.5□□□□□ -0.57
COL25A1-207ENST00000512961 NPM3O75607 178 aaKnown RBP11.38□□□□□ -0.59
COL25A1-207ENST00000512961 NCBP3Q53F19 620 aaKnown RBP11.38□□□□□ -0.59
COL25A1-207ENST00000512961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL25A1-207ENST00000512961 KCNA4P22459 653 aa11.26□□□□□ -0.61
COL25A1-207ENST00000512961 DSG3P32926 999 aa11.08□□□□□ -0.64
COL25A1-207ENST00000512961 CAPN15O75808 1086 aa10.98□□□□□ -0.65
COL25A1-207ENST00000512961 U3KPZ7 1027 aaPredicted RBP10.98□□□□□ -0.65
COL25A1-207ENST00000512961 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
COL25A1-207ENST00000512961 SLC4A2P04920 1241 aa10.9□□□□□ -0.66
COL25A1-207ENST00000512961 NISCHQ9Y2I1 1504 aa10.8□□□□□ -0.68
COL25A1-207ENST00000512961 APLP2Q06481 763 aa10.74□□□□□ -0.69
COL25A1-207ENST00000512961 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
COL25A1-207ENST00000512961 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
COL25A1-207ENST00000512961 TRHP20396 242 aaPredicted RBP10.64□□□□□ -0.71
COL25A1-207ENST00000512961 ABCB7O75027 752 aa10.62□□□□□ -0.71
COL25A1-207ENST00000512961 CHRDL2Q6WN34 429 aa10.6□□□□□ -0.71
COL25A1-207ENST00000512961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.58□□□□□ -0.72
COL25A1-207ENST00000512961 HNRNPUL2Q1KMD3 747 aaKnown RBP10.58□□□□□ -0.72
COL25A1-207ENST00000512961 SLC4A1APQ9BWU0 796 aaKnown RBP10.56□□□□□ -0.72
COL25A1-207ENST00000512961 SP7Q8TDD2 431 aaPredicted RBP10.53□□□□□ -0.72
COL25A1-207ENST00000512961 ABCC9O60706 1549 aa10.52□□□□□ -0.73
COL25A1-207ENST00000512961 SAMD1Q6SPF0 538 aaPredicted RBP10.46□□□□□ -0.73
COL25A1-207ENST00000512961 MYCNP04198 464 aaPredicted RBP10.43□□□□□ -0.74
COL25A1-207ENST00000512961 ZBTB22O15209 634 aa10.42□□□□□ -0.74
COL25A1-207ENST00000512961 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
COL25A1-207ENST00000512961 ATF5Q9Y2D1 282 aaPredicted RBP10.37□□□□□ -0.75
COL25A1-207ENST00000512961 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
COL25A1-207ENST00000512961 POLA2Q14181 598 aa10.26□□□□□ -0.77
COL25A1-207ENST00000512961 PIP4P2Q8N4L2 257 aa10.19□□□□□ -0.78
COL25A1-207ENST00000512961 HAX1O00165 279 aa10.15□□□□□ -0.78
COL25A1-207ENST00000512961 ZBTB12Q9Y330 459 aaPredicted RBP10.13□□□□□ -0.79
COL25A1-207ENST00000512961 REM2Q8IYK8 340 aaPredicted RBP10.12□□□□□ -0.79
COL25A1-207ENST00000512961 FXR2P51116 673 aaKnown RBP eCLIP10.08□□□□□ -0.8
COL25A1-207ENST00000512961 PITPNM1O00562 1244 aa10.02□□□□□ -0.81
COL25A1-207ENST00000512961 ATXN8OSP0DMR3 200 aa10□□□□□ -0.81
COL25A1-207ENST00000512961 DNAJC5Q9H3Z4 198 aa9.97□□□□□ -0.81
COL25A1-207ENST00000512961 CSRNP3Q8WYN3 585 aa9.96□□□□□ -0.82
COL25A1-207ENST00000512961 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
COL25A1-207ENST00000512961 CCDC180Q9P1Z9 1646 aa9.93□□□□□ -0.82
COL25A1-207ENST00000512961 EVX2Q03828 476 aa9.92□□□□□ -0.82
COL25A1-207ENST00000512961 MKRN4PQ13434 485 aaPredicted RBP9.86□□□□□ -0.83
COL25A1-207ENST00000512961 LHX8Q68G74 356 aa9.84□□□□□ -0.83
COL25A1-207ENST00000512961 EHMT2Q96KQ7 1210 aa9.84□□□□□ -0.83
COL25A1-207ENST00000512961 C19orf67A6NJJ6 358 aa9.78□□□□□ -0.84
COL25A1-207ENST00000512961 GABBR2O75899 941 aa9.74□□□□□ -0.85
COL25A1-207ENST00000512961 PRKAR2AP13861 404 aaKnown RBP9.74□□□□□ -0.85
COL25A1-207ENST00000512961 SPDYE2BA6NHP3 402 aa9.73□□□□□ -0.85
COL25A1-207ENST00000512961 SPDYE6P0CI01 402 aa9.73□□□□□ -0.85
COL25A1-207ENST00000512961 SPDYE2Q495Y8 402 aa9.73□□□□□ -0.85
COL25A1-207ENST00000512961 RB1CC1Q8TDY2 1594 aa9.72□□□□□ -0.85
COL25A1-207ENST00000512961 FBLN2P98095 1184 aa9.72□□□□□ -0.85
COL25A1-207ENST00000512961 PABPN1Q86U42 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL25A1-207ENST00000512961 SPDYE1Q8NFV5 336 aaPredicted RBP9.68□□□□□ -0.86
COL25A1-207ENST00000512961 PLSCR2Q9NRY7 297 aa9.63□□□□□ -0.87
COL25A1-207ENST00000512961 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
COL25A1-207ENST00000512961 ZNF692Q9BU19 519 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-207ENST00000512961 CLEC11AQ9Y240 323 aa9.6□□□□□ -0.87
COL25A1-207ENST00000512961 UNC13AQ9UPW8 1703 aa9.59□□□□□ -0.87
COL25A1-207ENST00000512961 BICRAQ9NZM4 1560 aa9.55□□□□□ -0.88
COL25A1-207ENST00000512961 CLCN6P51797 869 aa9.55□□□□□ -0.88
COL25A1-207ENST00000512961 CECR2Q9BXF3 1484 aa9.53□□□□□ -0.88
COL25A1-207ENST00000512961 NACADO15069 1562 aa9.52□□□□□ -0.89
COL25A1-207ENST00000512961 POTEIP0CG38 1075 aa9.5□□□□□ -0.89
COL25A1-207ENST00000512961 CC2D2AQ9P2K1 1620 aa9.49□□□□□ -0.89
COL25A1-207ENST00000512961 CHADLQ6NUI6 762 aa9.46□□□□□ -0.9
COL25A1-207ENST00000512961 CD44P16070 742 aaKnown RBP9.42□□□□□ -0.9
COL25A1-207ENST00000512961 PRR29P0C7W0 189 aa9.41□□□□□ -0.9
COL25A1-207ENST00000512961 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
COL25A1-207ENST00000512961 SPDYE4A6NLX3 237 aa9.33□□□□□ -0.92
COL25A1-207ENST00000512961 FARP1Q9Y4F1 1045 aaPredicted RBP9.33□□□□□ -0.92
COL25A1-207ENST00000512961 EIF4G1Q04637 1599 aaKnown RBP9.32□□□□□ -0.92
COL25A1-207ENST00000512961 ZNF579Q8NAF0 562 aaKnown RBP9.3□□□□□ -0.92
COL25A1-207ENST00000512961 CUX2O14529 1486 aa9.29□□□□□ -0.92
COL25A1-207ENST00000512961 POTEMA6NI47 508 aa9.29□□□□□ -0.92
COL25A1-207ENST00000512961 DCAF8L2P0C7V8 631 aa9.29□□□□□ -0.92
COL25A1-207ENST00000512961 PCDH10Q9P2E7 1040 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms