RNA–Protein interactions for RNA: ENST00000511682.1

PALLD-213, Transcript of palladin, cytoskeletal associated protein, humanhuman

TSL 2

Gene PALLD, Length 661 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-213ENST00000511682 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
PALLD-213ENST00000511682 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
PALLD-213ENST00000511682 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
PALLD-213ENST00000511682 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
PALLD-213ENST00000511682 FOXD1Q16676 465 aa19.3■□□□□ 0.68
PALLD-213ENST00000511682 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
PALLD-213ENST00000511682 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
PALLD-213ENST00000511682 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
PALLD-213ENST00000511682 ADRA2BP18089 450 aa18.23■□□□□ 0.51
PALLD-213ENST00000511682 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
PALLD-213ENST00000511682 MSH5O43196 834 aa17.92■□□□□ 0.46
PALLD-213ENST00000511682 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
PALLD-213ENST00000511682 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
PALLD-213ENST00000511682 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
PALLD-213ENST00000511682 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
PALLD-213ENST00000511682 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
PALLD-213ENST00000511682 HOXD11P31277 338 aaPredicted RBP15.92■□□□□ 0.14
PALLD-213ENST00000511682 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
PALLD-213ENST00000511682 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
PALLD-213ENST00000511682 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
PALLD-213ENST00000511682 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
PALLD-213ENST00000511682 KCNA4P22459 653 aa15.65■□□□□ 0.1
PALLD-213ENST00000511682 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
PALLD-213ENST00000511682 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
PALLD-213ENST00000511682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
PALLD-213ENST00000511682 DNAJC5BQ9UF47 199 aa15.25■□□□□ 0.03
PALLD-213ENST00000511682 C1QBPQ07021 282 aaKnown RBP15.1■□□□□ 0.01
PALLD-213ENST00000511682 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
PALLD-213ENST00000511682 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
PALLD-213ENST00000511682 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
PALLD-213ENST00000511682 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
PALLD-213ENST00000511682 CAPN15O75808 1086 aa14.65□□□□□ -0.06
PALLD-213ENST00000511682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.55□□□□□ -0.08
PALLD-213ENST00000511682 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
PALLD-213ENST00000511682 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
PALLD-213ENST00000511682 TRHP20396 242 aaPredicted RBP14.49□□□□□ -0.09
PALLD-213ENST00000511682 APLP2Q06481 763 aa14.49□□□□□ -0.09
PALLD-213ENST00000511682 SAMD1Q6SPF0 538 aaPredicted RBP14.49□□□□□ -0.09
PALLD-213ENST00000511682 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
PALLD-213ENST00000511682 DSG3P32926 999 aa14.45□□□□□ -0.1
PALLD-213ENST00000511682 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
PALLD-213ENST00000511682 ZBTB22O15209 634 aa14.37□□□□□ -0.11
PALLD-213ENST00000511682 NISCHQ9Y2I1 1504 aa14.36□□□□□ -0.11
PALLD-213ENST00000511682 ABCB7O75027 752 aa14.35□□□□□ -0.11
PALLD-213ENST00000511682 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
PALLD-213ENST00000511682 POTEHQ6S545 545 aa14.17□□□□□ -0.14
PALLD-213ENST00000511682 POLA2Q14181 598 aa14.12□□□□□ -0.15
PALLD-213ENST00000511682 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
PALLD-213ENST00000511682 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
PALLD-213ENST00000511682 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
PALLD-213ENST00000511682 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
PALLD-213ENST00000511682 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
PALLD-213ENST00000511682 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
PALLD-213ENST00000511682 FBLN2P98095 1184 aa13.61□□□□□ -0.23
PALLD-213ENST00000511682 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
PALLD-213ENST00000511682 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
PALLD-213ENST00000511682 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
PALLD-213ENST00000511682 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
PALLD-213ENST00000511682 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
PALLD-213ENST00000511682 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
PALLD-213ENST00000511682 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
PALLD-213ENST00000511682 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
PALLD-213ENST00000511682 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
PALLD-213ENST00000511682 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
PALLD-213ENST00000511682 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
PALLD-213ENST00000511682 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
PALLD-213ENST00000511682 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
PALLD-213ENST00000511682 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
PALLD-213ENST00000511682 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
PALLD-213ENST00000511682 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
PALLD-213ENST00000511682 CCDC180Q9P1Z9 1646 aa12.97□□□□□ -0.33
PALLD-213ENST00000511682 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
PALLD-213ENST00000511682 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
PALLD-213ENST00000511682 ABCC9O60706 1549 aa12.93□□□□□ -0.34
PALLD-213ENST00000511682 SP7Q8TDD2 431 aaPredicted RBP12.92□□□□□ -0.34
PALLD-213ENST00000511682 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
PALLD-213ENST00000511682 HAX1O00165 279 aa12.87□□□□□ -0.35
PALLD-213ENST00000511682 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
PALLD-213ENST00000511682 EVX2Q03828 476 aa12.71□□□□□ -0.37
PALLD-213ENST00000511682 PROM2Q8N271 834 aa12.67□□□□□ -0.38
PALLD-213ENST00000511682 FKBP8Q14318 412 aa12.66□□□□□ -0.38
PALLD-213ENST00000511682 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
PALLD-213ENST00000511682 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
PALLD-213ENST00000511682 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
PALLD-213ENST00000511682 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
PALLD-213ENST00000511682 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
PALLD-213ENST00000511682 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
PALLD-213ENST00000511682 NPM1P06748 294 aaKnown RBP eCLIP12.43□□□□□ -0.42
PALLD-213ENST00000511682 MIER1Q8N108 512 aa12.43□□□□□ -0.42
PALLD-213ENST00000511682 GABBR2O75899 941 aa12.42□□□□□ -0.42
PALLD-213ENST00000511682 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
PALLD-213ENST00000511682 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
PALLD-213ENST00000511682 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
PALLD-213ENST00000511682 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
PALLD-213ENST00000511682 RB1CC1Q8TDY2 1594 aa12.31□□□□□ -0.44
PALLD-213ENST00000511682 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
PALLD-213ENST00000511682 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
PALLD-213ENST00000511682 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
PALLD-213ENST00000511682 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
PALLD-213ENST00000511682 NACADO15069 1562 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms