RNA–Protein interactions for RNA: ENST00000509259.5

CAST-225, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-225ENST00000509259 AEBP2Q6ZN18 517 aaPredicted RBP30.83■■■□□ 2.53
CAST-225ENST00000509259 CHIC1Q5VXU3 224 aa29.63■■■□□ 2.33
CAST-225ENST00000509259 SENP3Q9H4L4 574 aaPredicted RBP26.31■■□□□ 1.8
CAST-225ENST00000509259 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
CAST-225ENST00000509259 FOXD1Q16676 465 aa24.44■■□□□ 1.5
CAST-225ENST00000509259 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
CAST-225ENST00000509259 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
CAST-225ENST00000509259 ADRA2BP18089 450 aa23.08■■□□□ 1.29
CAST-225ENST00000509259 PIAS4Q8N2W9 510 aaPredicted RBP22.99■■□□□ 1.27
CAST-225ENST00000509259 MSH5O43196 834 aa22.8■■□□□ 1.24
CAST-225ENST00000509259 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
CAST-225ENST00000509259 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
CAST-225ENST00000509259 MAPK8IP2Q13387 824 aaPredicted RBP21.09■□□□□ 0.97
CAST-225ENST00000509259 PPP4R3CPQ6ZMV5 832 aa20.96■□□□□ 0.95
CAST-225ENST00000509259 DMRT2Q9Y5R5 561 aa20.89■□□□□ 0.93
CAST-225ENST00000509259 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
CAST-225ENST00000509259 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
CAST-225ENST00000509259 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
CAST-225ENST00000509259 HOXD11P31277 338 aaPredicted RBP20.23■□□□□ 0.83
CAST-225ENST00000509259 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
CAST-225ENST00000509259 DCAF8L1A6NGE4 600 aa20.13■□□□□ 0.81
CAST-225ENST00000509259 NPM3O75607 178 aaKnown RBP19.95■□□□□ 0.78
CAST-225ENST00000509259 KCNA4P22459 653 aa19.87■□□□□ 0.77
CAST-225ENST00000509259 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
CAST-225ENST00000509259 RNF39Q9H2S5 420 aa19.44■□□□□ 0.7
CAST-225ENST00000509259 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
CAST-225ENST00000509259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.692e-8■■■□□ 16.2
CAST-225ENST00000509259 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
CAST-225ENST00000509259 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
CAST-225ENST00000509259 SLC4A2P04920 1241 aa18.93■□□□□ 0.62
CAST-225ENST00000509259 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
CAST-225ENST00000509259 ABCC9O60706 1549 aa18.76■□□□□ 0.59
CAST-225ENST00000509259 CAPN15O75808 1086 aa18.6■□□□□ 0.57
CAST-225ENST00000509259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
CAST-225ENST00000509259 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
CAST-225ENST00000509259 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
CAST-225ENST00000509259 APLP2Q06481 763 aa18.54■□□□□ 0.56
CAST-225ENST00000509259 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.55
CAST-225ENST00000509259 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
CAST-225ENST00000509259 SAMD1Q6SPF0 538 aaPredicted RBP18.48■□□□□ 0.55
CAST-225ENST00000509259 FOXD4L1Q9NU39 408 aa18.47■□□□□ 0.55
CAST-225ENST00000509259 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
CAST-225ENST00000509259 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
CAST-225ENST00000509259 DSG3P32926 999 aa18.32■□□□□ 0.52
CAST-225ENST00000509259 ZBTB22O15209 634 aa18.24■□□□□ 0.51
CAST-225ENST00000509259 ABCB7O75027 752 aa18.18■□□□□ 0.5
CAST-225ENST00000509259 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
CAST-225ENST00000509259 POLA2Q14181 598 aa17.92■□□□□ 0.46
CAST-225ENST00000509259 ATXN8OSP0DMR3 200 aa17.84■□□□□ 0.45
CAST-225ENST00000509259 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
CAST-225ENST00000509259 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
CAST-225ENST00000509259 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
CAST-225ENST00000509259 ZBTB12Q9Y330 459 aaPredicted RBP17.61■□□□□ 0.41
CAST-225ENST00000509259 NACADO15069 1562 aa17.57■□□□□ 0.4
CAST-225ENST00000509259 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
CAST-225ENST00000509259 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
CAST-225ENST00000509259 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
CAST-225ENST00000509259 FBLN2P98095 1184 aa17.34■□□□□ 0.37
CAST-225ENST00000509259 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
CAST-225ENST00000509259 UNC13AQ9UPW8 1703 aa17.28■□□□□ 0.36
CAST-225ENST00000509259 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
CAST-225ENST00000509259 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
CAST-225ENST00000509259 AKT1S1Q96B36 256 aa17.18■□□□□ 0.34
CAST-225ENST00000509259 MKRN4PQ13434 485 aaPredicted RBP17.16■□□□□ 0.34
CAST-225ENST00000509259 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
CAST-225ENST00000509259 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
CAST-225ENST00000509259 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
CAST-225ENST00000509259 POTEHQ6S545 545 aa17.05■□□□□ 0.32
CAST-225ENST00000509259 REM2Q8IYK8 340 aaPredicted RBP17■□□□□ 0.31
CAST-225ENST00000509259 CHRDL2Q6WN34 429 aa16.99■□□□□ 0.31
CAST-225ENST00000509259 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
CAST-225ENST00000509259 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
CAST-225ENST00000509259 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
CAST-225ENST00000509259 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
CAST-225ENST00000509259 CECR2Q9BXF3 1484 aa16.92■□□□□ 0.3
CAST-225ENST00000509259 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
CAST-225ENST00000509259 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
CAST-225ENST00000509259 SSUH2Q9Y2M2 353 aa16.84■□□□□ 0.29
CAST-225ENST00000509259 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
CAST-225ENST00000509259 PITPNM1O00562 1244 aa16.82■□□□□ 0.28
CAST-225ENST00000509259 SPDYE1Q8NFV5 336 aaPredicted RBP16.71■□□□□ 0.27
CAST-225ENST00000509259 CLEC11AQ9Y240 323 aa16.7■□□□□ 0.26
CAST-225ENST00000509259 PIP4P2Q8N4L2 257 aa16.65■□□□□ 0.26
CAST-225ENST00000509259 SPDYE4A6NLX3 237 aa16.59■□□□□ 0.25
CAST-225ENST00000509259 FXR2P51116 673 aaKnown RBP eCLIP16.58■□□□□ 0.245e-6■□□□□ 8.9
CAST-225ENST00000509259 PRR29P0C7W0 189 aa16.45■□□□□ 0.22
CAST-225ENST00000509259 DNAJC5Q9H3Z4 198 aa16.43■□□□□ 0.22
CAST-225ENST00000509259 PRKAR2AP13861 404 aaKnown RBP16.42■□□□□ 0.22
CAST-225ENST00000509259 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
CAST-225ENST00000509259 HAX1O00165 279 aa16.31■□□□□ 0.2
CAST-225ENST00000509259 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
CAST-225ENST00000509259 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
CAST-225ENST00000509259 CUX2O14529 1486 aa16.23■□□□□ 0.19
CAST-225ENST00000509259 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
CAST-225ENST00000509259 PROM2Q8N271 834 aa16.15■□□□□ 0.18
CAST-225ENST00000509259 SP7Q8TDD2 431 aaPredicted RBP16.14■□□□□ 0.17
CAST-225ENST00000509259 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
CAST-225ENST00000509259 FKBP8Q14318 412 aa16.12■□□□□ 0.17
CAST-225ENST00000509259 SMARCA2P51531 1590 aa16.11■□□□□ 0.17
CAST-225ENST00000509259 FARP1Q9Y4F1 1045 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms