RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 AEBP2Q6ZN18 517 aaPredicted RBP32.09■■■□□ 2.73
CDH6-204ENST00000508132 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
CDH6-204ENST00000508132 SENP3Q9H4L4 574 aaPredicted RBP27.17■■□□□ 1.94
CDH6-204ENST00000508132 PHF23Q9BUL5 403 aaPredicted RBP26.9■■□□□ 1.9
CDH6-204ENST00000508132 FOXD1Q16676 465 aa25.47■■□□□ 1.67
CDH6-204ENST00000508132 PLPPR3Q6T4P5 718 aa24.09■■□□□ 1.45
CDH6-204ENST00000508132 PPP6R1Q9UPN7 881 aa23.85■■□□□ 1.41
CDH6-204ENST00000508132 ADRA2BP18089 450 aa23.75■■□□□ 1.39
CDH6-204ENST00000508132 PIAS4Q8N2W9 510 aaPredicted RBP23.74■■□□□ 1.39
CDH6-204ENST00000508132 MSH5O43196 834 aa23.69■■□□□ 1.38
CDH6-204ENST00000508132 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
CDH6-204ENST00000508132 MAPK8IP2Q13387 824 aaPredicted RBP21.87■■□□□ 1.09
CDH6-204ENST00000508132 DMRT2Q9Y5R5 561 aa21.59■■□□□ 1.05
CDH6-204ENST00000508132 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
CDH6-204ENST00000508132 PPP4R3CPQ6ZMV5 832 aa21.2■□□□□ 0.98
CDH6-204ENST00000508132 HOXD11P31277 338 aaPredicted RBP20.76■□□□□ 0.91
CDH6-204ENST00000508132 DCAF8L1A6NGE4 600 aa20.75■□□□□ 0.91
CDH6-204ENST00000508132 CNKSR2Q8WXI2 1034 aa20.73■□□□□ 0.91
CDH6-204ENST00000508132 RNF216Q9NWF9 866 aaPredicted RBP20.56■□□□□ 0.88
CDH6-204ENST00000508132 CACNB1Q02641 598 aaPredicted RBP20.44■□□□□ 0.86
CDH6-204ENST00000508132 RNF39Q9H2S5 420 aa20.3■□□□□ 0.84
CDH6-204ENST00000508132 NCBP3Q53F19 620 aaKnown RBP20.22■□□□□ 0.83
CDH6-204ENST00000508132 NPM3O75607 178 aaKnown RBP20.11■□□□□ 0.81
CDH6-204ENST00000508132 C1QBPQ07021 282 aaKnown RBP19.9■□□□□ 0.78
CDH6-204ENST00000508132 DNAJC5BQ9UF47 199 aa19.9■□□□□ 0.78
CDH6-204ENST00000508132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.77■□□□□ 0.76
CDH6-204ENST00000508132 KCNA4P22459 653 aa19.73■□□□□ 0.75
CDH6-204ENST00000508132 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
CDH6-204ENST00000508132 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
CDH6-204ENST00000508132 SPINK5Q9NQ38 1064 aaPredicted RBP19.22■□□□□ 0.67
CDH6-204ENST00000508132 CAPN15O75808 1086 aa19.09■□□□□ 0.65
CDH6-204ENST00000508132 DSG3P32926 999 aa19.01■□□□□ 0.63
CDH6-204ENST00000508132 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
CDH6-204ENST00000508132 ABCB7O75027 752 aa18.75■□□□□ 0.59
CDH6-204ENST00000508132 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
CDH6-204ENST00000508132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
CDH6-204ENST00000508132 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
CDH6-204ENST00000508132 APLP2Q06481 763 aa18.61■□□□□ 0.57
CDH6-204ENST00000508132 SAMD1Q6SPF0 538 aaPredicted RBP18.59■□□□□ 0.57
CDH6-204ENST00000508132 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
CDH6-204ENST00000508132 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
CDH6-204ENST00000508132 NISCHQ9Y2I1 1504 aa18.35■□□□□ 0.53
CDH6-204ENST00000508132 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
CDH6-204ENST00000508132 ATF5Q9Y2D1 282 aaPredicted RBP18.28■□□□□ 0.52
CDH6-204ENST00000508132 POTEHQ6S545 545 aa18.27■□□□□ 0.52
CDH6-204ENST00000508132 POLA2Q14181 598 aa18.26■□□□□ 0.51
CDH6-204ENST00000508132 ZBTB22O15209 634 aa18.22■□□□□ 0.51
CDH6-204ENST00000508132 RBM42Q9BTD8 480 aaKnown RBP17.98■□□□□ 0.47
CDH6-204ENST00000508132 OSCARQ8IYS5 282 aa17.75■□□□□ 0.43
CDH6-204ENST00000508132 CHRDL2Q6WN34 429 aa17.74■□□□□ 0.43
CDH6-204ENST00000508132 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
CDH6-204ENST00000508132 ABCC9O60706 1549 aa17.69■□□□□ 0.42
CDH6-204ENST00000508132 ATXN8OSP0DMR3 200 aa17.65■□□□□ 0.42
CDH6-204ENST00000508132 AKT1S1Q96B36 256 aa17.61■□□□□ 0.41
CDH6-204ENST00000508132 REM2Q8IYK8 340 aaPredicted RBP17.53■□□□□ 0.4
CDH6-204ENST00000508132 PITPNM1O00562 1244 aa17.4■□□□□ 0.38
CDH6-204ENST00000508132 MKRN4PQ13434 485 aaPredicted RBP17.4■□□□□ 0.38
CDH6-204ENST00000508132 PIP4P2Q8N4L2 257 aa17.36■□□□□ 0.37
CDH6-204ENST00000508132 FBLN2P98095 1184 aa17.33■□□□□ 0.36
CDH6-204ENST00000508132 SPDYE2BA6NHP3 402 aa17.25■□□□□ 0.35
CDH6-204ENST00000508132 SPDYE6P0CI01 402 aa17.25■□□□□ 0.35
CDH6-204ENST00000508132 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
CDH6-204ENST00000508132 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
CDH6-204ENST00000508132 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
CDH6-204ENST00000508132 SSUH2Q9Y2M2 353 aa17.09■□□□□ 0.33
CDH6-204ENST00000508132 SP7Q8TDD2 431 aaPredicted RBP17.08■□□□□ 0.32
CDH6-204ENST00000508132 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.32
CDH6-204ENST00000508132 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
CDH6-204ENST00000508132 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.32
CDH6-204ENST00000508132 HAX1O00165 279 aa17■□□□□ 0.31
CDH6-204ENST00000508132 SPDYE1Q8NFV5 336 aaPredicted RBP16.95■□□□□ 0.3
CDH6-204ENST00000508132 EVX2Q03828 476 aa16.94■□□□□ 0.3
CDH6-204ENST00000508132 PRKAR2AP13861 404 aaKnown RBP16.9■□□□□ 0.3
CDH6-204ENST00000508132 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDH6-204ENST00000508132 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.28
CDH6-204ENST00000508132 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
CDH6-204ENST00000508132 PRR29P0C7W0 189 aa16.67■□□□□ 0.26
CDH6-204ENST00000508132 C19orf67A6NJJ6 358 aa16.65■□□□□ 0.26
CDH6-204ENST00000508132 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
CDH6-204ENST00000508132 SPDYE4A6NLX3 237 aa16.44■□□□□ 0.22
CDH6-204ENST00000508132 GABBR2O75899 941 aa16.44■□□□□ 0.22
CDH6-204ENST00000508132 FARP1Q9Y4F1 1045 aaPredicted RBP16.44■□□□□ 0.22
CDH6-204ENST00000508132 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
CDH6-204ENST00000508132 CD44P16070 742 aaKnown RBP16.36■□□□□ 0.21
CDH6-204ENST00000508132 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
CDH6-204ENST00000508132 UNC13AQ9UPW8 1703 aa16.23■□□□□ 0.19
CDH6-204ENST00000508132 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
CDH6-204ENST00000508132 POTEIP0CG38 1075 aa16.18■□□□□ 0.18
CDH6-204ENST00000508132 ZRANB1Q9UGI0 708 aa16.12■□□□□ 0.17
CDH6-204ENST00000508132 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
CDH6-204ENST00000508132 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
CDH6-204ENST00000508132 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
CDH6-204ENST00000508132 PROM2Q8N271 834 aa16.05■□□□□ 0.16
CDH6-204ENST00000508132 NACADO15069 1562 aa16.04■□□□□ 0.16
CDH6-204ENST00000508132 LHX8Q68G74 356 aa16.02■□□□□ 0.16
CDH6-204ENST00000508132 GALR2O43603 387 aaPredicted RBP15.98■□□□□ 0.15
CDH6-204ENST00000508132 PHF12Q96QT6 1004 aa15.98■□□□□ 0.15
CDH6-204ENST00000508132 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
CDH6-204ENST00000508132 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
CDH6-204ENST00000508132 DCBLD2Q96PD2 775 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms