RNA–Protein interactions for RNA: ENST00000507216.1

SLC38A9-213, Transcript of solute carrier family 38 member 9, humanhuman

TSL 3

Gene SLC38A9, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-213ENST00000507216 AEBP2Q6ZN18 517 aaPredicted RBP28.36■■■□□ 2.13
SLC38A9-213ENST00000507216 CHIC1Q5VXU3 224 aa26.33■■□□□ 1.81
SLC38A9-213ENST00000507216 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
SLC38A9-213ENST00000507216 PHF23Q9BUL5 403 aaPredicted RBP23.81■■□□□ 1.4
SLC38A9-213ENST00000507216 FOXD1Q16676 465 aa22.73■■□□□ 1.23
SLC38A9-213ENST00000507216 POTEDQ86YR6 584 aa22.5■■□□□ 1.19
SLC38A9-213ENST00000507216 MSH5O43196 834 aa21.49■■□□□ 1.03
SLC38A9-213ENST00000507216 PIAS4Q8N2W9 510 aaPredicted RBP20.99■□□□□ 0.95
SLC38A9-213ENST00000507216 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
SLC38A9-213ENST00000507216 ADRA2BP18089 450 aa20.52■□□□□ 0.88
SLC38A9-213ENST00000507216 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
SLC38A9-213ENST00000507216 MAPK8IP2Q13387 824 aaPredicted RBP19.12■□□□□ 0.65
SLC38A9-213ENST00000507216 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.64
SLC38A9-213ENST00000507216 CACNB1Q02641 598 aaPredicted RBP18.99■□□□□ 0.63
SLC38A9-213ENST00000507216 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
SLC38A9-213ENST00000507216 RNF39Q9H2S5 420 aa18.33■□□□□ 0.52
SLC38A9-213ENST00000507216 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
SLC38A9-213ENST00000507216 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
SLC38A9-213ENST00000507216 C1QBPQ07021 282 aaKnown RBP17.95■□□□□ 0.46
SLC38A9-213ENST00000507216 PPP4R3CPQ6ZMV5 832 aa17.79■□□□□ 0.44
SLC38A9-213ENST00000507216 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
SLC38A9-213ENST00000507216 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
SLC38A9-213ENST00000507216 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
SLC38A9-213ENST00000507216 POTEHQ6S545 545 aa17.44■□□□□ 0.38
SLC38A9-213ENST00000507216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
SLC38A9-213ENST00000507216 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
SLC38A9-213ENST00000507216 DSG3P32926 999 aa16.89■□□□□ 0.29
SLC38A9-213ENST00000507216 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
SLC38A9-213ENST00000507216 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
SLC38A9-213ENST00000507216 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
SLC38A9-213ENST00000507216 CAPN15O75808 1086 aa16.74■□□□□ 0.27
SLC38A9-213ENST00000507216 NPM3O75607 178 aaKnown RBP16.62■□□□□ 0.25
SLC38A9-213ENST00000507216 ABCB7O75027 752 aa16.34■□□□□ 0.21
SLC38A9-213ENST00000507216 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
SLC38A9-213ENST00000507216 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
SLC38A9-213ENST00000507216 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
SLC38A9-213ENST00000507216 CHRDL2Q6WN34 429 aa16.09■□□□□ 0.17
SLC38A9-213ENST00000507216 APLP2Q06481 763 aa16.04■□□□□ 0.16
SLC38A9-213ENST00000507216 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
SLC38A9-213ENST00000507216 ABCC9O60706 1549 aa15.98■□□□□ 0.15
SLC38A9-213ENST00000507216 SP7Q8TDD2 431 aaPredicted RBP15.94■□□□□ 0.14
SLC38A9-213ENST00000507216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
SLC38A9-213ENST00000507216 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
SLC38A9-213ENST00000507216 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
SLC38A9-213ENST00000507216 POLA2Q14181 598 aa15.66■□□□□ 0.1
SLC38A9-213ENST00000507216 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
SLC38A9-213ENST00000507216 KCNA4P22459 653 aa15.59■□□□□ 0.09
SLC38A9-213ENST00000507216 PIP4P2Q8N4L2 257 aa15.56■□□□□ 0.08
SLC38A9-213ENST00000507216 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
SLC38A9-213ENST00000507216 HAX1O00165 279 aa15.46■□□□□ 0.07
SLC38A9-213ENST00000507216 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
SLC38A9-213ENST00000507216 MYCNP04198 464 aaPredicted RBP15.34■□□□□ 0.05
SLC38A9-213ENST00000507216 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
SLC38A9-213ENST00000507216 EVX2Q03828 476 aa15.31■□□□□ 0.04
SLC38A9-213ENST00000507216 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
SLC38A9-213ENST00000507216 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
SLC38A9-213ENST00000507216 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
SLC38A9-213ENST00000507216 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
SLC38A9-213ENST00000507216 RB1CC1Q8TDY2 1594 aa15.07■□□□□ 0
SLC38A9-213ENST00000507216 LHX8Q68G74 356 aa14.94□□□□□ -0.02
SLC38A9-213ENST00000507216 NACADO15069 1562 aa14.86□□□□□ -0.03
SLC38A9-213ENST00000507216 C19orf67A6NJJ6 358 aa14.86□□□□□ -0.03
SLC38A9-213ENST00000507216 GABBR2O75899 941 aa14.85□□□□□ -0.03
SLC38A9-213ENST00000507216 PRKAR2AP13861 404 aaKnown RBP14.85□□□□□ -0.03
SLC38A9-213ENST00000507216 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
SLC38A9-213ENST00000507216 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
SLC38A9-213ENST00000507216 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
SLC38A9-213ENST00000507216 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
SLC38A9-213ENST00000507216 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
SLC38A9-213ENST00000507216 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
SLC38A9-213ENST00000507216 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
SLC38A9-213ENST00000507216 PLSCR2Q9NRY7 297 aa14.68□□□□□ -0.06
SLC38A9-213ENST00000507216 BICRAQ9NZM4 1560 aa14.67□□□□□ -0.06
SLC38A9-213ENST00000507216 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
SLC38A9-213ENST00000507216 POTEIP0CG38 1075 aa14.59□□□□□ -0.07
SLC38A9-213ENST00000507216 MYO15BQ96JP2 1530 aa14.57□□□□□ -0.08
SLC38A9-213ENST00000507216 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
SLC38A9-213ENST00000507216 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
SLC38A9-213ENST00000507216 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
SLC38A9-213ENST00000507216 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
SLC38A9-213ENST00000507216 FBLN2P98095 1184 aa14.48□□□□□ -0.09
SLC38A9-213ENST00000507216 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
SLC38A9-213ENST00000507216 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
SLC38A9-213ENST00000507216 CC2D2AQ9P2K1 1620 aa14.45□□□□□ -0.1
SLC38A9-213ENST00000507216 DCAF8L2P0C7V8 631 aa14.45□□□□□ -0.1
SLC38A9-213ENST00000507216 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
SLC38A9-213ENST00000507216 ZNF692Q9BU19 519 aaPredicted RBP14.39□□□□□ -0.11
SLC38A9-213ENST00000507216 ZBTB22O15209 634 aa14.36□□□□□ -0.11
SLC38A9-213ENST00000507216 ATXN8OSP0DMR3 200 aa14.33□□□□□ -0.12
SLC38A9-213ENST00000507216 CD44P16070 742 aaKnown RBP14.33□□□□□ -0.12
SLC38A9-213ENST00000507216 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
SLC38A9-213ENST00000507216 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
SLC38A9-213ENST00000507216 DCBLD2Q96PD2 775 aa14.21□□□□□ -0.13
SLC38A9-213ENST00000507216 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
SLC38A9-213ENST00000507216 CLCN6P51797 869 aa14.19□□□□□ -0.14
SLC38A9-213ENST00000507216 DCAF1Q9Y4B6 1507 aa14.19□□□□□ -0.14
SLC38A9-213ENST00000507216 OTUD5Q96G74 571 aa14.18□□□□□ -0.14
SLC38A9-213ENST00000507216 POTEMA6NI47 508 aa14.12□□□□□ -0.15
SLC38A9-213ENST00000507216 ZCCHC6Q5VYS8 1495 aaKnown RBP14.11□□□□□ -0.15
SLC38A9-213ENST00000507216 POTEB2H3BUK9 544 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms