RNA–Protein interactions for RNA: ENST00000506590.1

CXCL13-202, Transcript of C-X-C motif chemokine ligand 13, humanhuman

TSL 2

Gene CXCL13, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-202ENST00000506590 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
CXCL13-202ENST00000506590 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
CXCL13-202ENST00000506590 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
CXCL13-202ENST00000506590 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
CXCL13-202ENST00000506590 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
CXCL13-202ENST00000506590 FOXD1Q16676 465 aa13.35□□□□□ -0.27
CXCL13-202ENST00000506590 ADRA2BP18089 450 aa12.97□□□□□ -0.33
CXCL13-202ENST00000506590 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
CXCL13-202ENST00000506590 PIAS4Q8N2W9 510 aaPredicted RBP12.6□□□□□ -0.39
CXCL13-202ENST00000506590 MSH5O43196 834 aa12.15□□□□□ -0.46
CXCL13-202ENST00000506590 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
CXCL13-202ENST00000506590 KCNA4P22459 653 aa11.84□□□□□ -0.51
CXCL13-202ENST00000506590 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
CXCL13-202ENST00000506590 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
CXCL13-202ENST00000506590 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
CXCL13-202ENST00000506590 CNKSR2Q8WXI2 1034 aa11.54□□□□□ -0.56
CXCL13-202ENST00000506590 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
CXCL13-202ENST00000506590 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
CXCL13-202ENST00000506590 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
CXCL13-202ENST00000506590 SLC4A1APQ9BWU0 796 aaKnown RBP11.24□□□□□ -0.61
CXCL13-202ENST00000506590 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
CXCL13-202ENST00000506590 EHMT2Q96KQ7 1210 aa11.13□□□□□ -0.63
CXCL13-202ENST00000506590 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
CXCL13-202ENST00000506590 POTEDQ86YR6 584 aa11.02□□□□□ -0.65
CXCL13-202ENST00000506590 DNAJC5BQ9UF47 199 aa10.95□□□□□ -0.66
CXCL13-202ENST00000506590 ZBTB22O15209 634 aa10.91□□□□□ -0.66
CXCL13-202ENST00000506590 CSRNP3Q8WYN3 585 aa10.89□□□□□ -0.67
CXCL13-202ENST00000506590 SLC4A2P04920 1241 aa10.86□□□□□ -0.67
CXCL13-202ENST00000506590 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
CXCL13-202ENST00000506590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.76□□□□□ -0.69
CXCL13-202ENST00000506590 U3KPZ7 1027 aaPredicted RBP10.6□□□□□ -0.71
CXCL13-202ENST00000506590 MYCNP04198 464 aaPredicted RBP10.57□□□□□ -0.72
CXCL13-202ENST00000506590 NISCHQ9Y2I1 1504 aa10.57□□□□□ -0.72
CXCL13-202ENST00000506590 RNF39Q9H2S5 420 aa10.47□□□□□ -0.73
CXCL13-202ENST00000506590 ATF5Q9Y2D1 282 aaPredicted RBP10.42□□□□□ -0.74
CXCL13-202ENST00000506590 SAMD1Q6SPF0 538 aaPredicted RBP10.36□□□□□ -0.75
CXCL13-202ENST00000506590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.35□□□□□ -0.75
CXCL13-202ENST00000506590 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
CXCL13-202ENST00000506590 SPINK5Q9NQ38 1064 aaPredicted RBP10.33□□□□□ -0.76
CXCL13-202ENST00000506590 ATXN8OSP0DMR3 200 aa10.31□□□□□ -0.76
CXCL13-202ENST00000506590 C1QBPQ07021 282 aaKnown RBP10.29□□□□□ -0.76
CXCL13-202ENST00000506590 CAPN15O75808 1086 aa10.26□□□□□ -0.77
CXCL13-202ENST00000506590 TRHP20396 242 aaPredicted RBP10.26□□□□□ -0.77
CXCL13-202ENST00000506590 APLP2Q06481 763 aa10.2□□□□□ -0.78
CXCL13-202ENST00000506590 CACNB1Q02641 598 aaPredicted RBP10.19□□□□□ -0.78
CXCL13-202ENST00000506590 ZNF219Q9P2Y4 722 aaPredicted RBP10.16□□□□□ -0.78
CXCL13-202ENST00000506590 ABCB7O75027 752 aa10.13□□□□□ -0.79
CXCL13-202ENST00000506590 POLA2Q14181 598 aa10.07□□□□□ -0.8
CXCL13-202ENST00000506590 DSG3P32926 999 aa10.02□□□□□ -0.81
CXCL13-202ENST00000506590 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
CXCL13-202ENST00000506590 FKBP8Q14318 412 aa9.86□□□□□ -0.83
CXCL13-202ENST00000506590 FBLN2P98095 1184 aa9.85□□□□□ -0.83
CXCL13-202ENST00000506590 ZBTB12Q9Y330 459 aaPredicted RBP9.76□□□□□ -0.85
CXCL13-202ENST00000506590 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
CXCL13-202ENST00000506590 SPDYE4A6NLX3 237 aa9.71□□□□□ -0.86
CXCL13-202ENST00000506590 ZNF692Q9BU19 519 aaPredicted RBP9.61□□□□□ -0.87
CXCL13-202ENST00000506590 SPDYE2BA6NHP3 402 aa9.56□□□□□ -0.88
CXCL13-202ENST00000506590 SPDYE6P0CI01 402 aa9.56□□□□□ -0.88
CXCL13-202ENST00000506590 SPDYE2Q495Y8 402 aa9.56□□□□□ -0.88
CXCL13-202ENST00000506590 PABPN1Q86U42 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
CXCL13-202ENST00000506590 SSUH2Q9Y2M2 353 aa9.51□□□□□ -0.89
CXCL13-202ENST00000506590 PROM2Q8N271 834 aa9.48□□□□□ -0.89
CXCL13-202ENST00000506590 RBM42Q9BTD8 480 aaKnown RBP9.45□□□□□ -0.9
CXCL13-202ENST00000506590 AKT1S1Q96B36 256 aa9.39□□□□□ -0.91
CXCL13-202ENST00000506590 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
CXCL13-202ENST00000506590 ABCC9O60706 1549 aa9.37□□□□□ -0.91
CXCL13-202ENST00000506590 REM2Q8IYK8 340 aaPredicted RBP9.36□□□□□ -0.91
CXCL13-202ENST00000506590 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
CXCL13-202ENST00000506590 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
CXCL13-202ENST00000506590 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
CXCL13-202ENST00000506590 SPDYE1Q8NFV5 336 aaPredicted RBP9.28□□□□□ -0.92
CXCL13-202ENST00000506590 PITPNM1O00562 1244 aa9.27□□□□□ -0.93
CXCL13-202ENST00000506590 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
CXCL13-202ENST00000506590 IFNLR1Q8IU57 520 aaPredicted RBP9.22□□□□□ -0.93
CXCL13-202ENST00000506590 MIER1Q8N108 512 aa9.22□□□□□ -0.93
CXCL13-202ENST00000506590 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
CXCL13-202ENST00000506590 PLCD3Q8N3E9 789 aa9.21□□□□□ -0.94
CXCL13-202ENST00000506590 KLHL34Q8N239 644 aa9.16□□□□□ -0.94
CXCL13-202ENST00000506590 CHADLQ6NUI6 762 aa9.14□□□□□ -0.95
CXCL13-202ENST00000506590 RTN4Q9NQC3 1192 aaKnown RBP9.14□□□□□ -0.95
CXCL13-202ENST00000506590 CREBZFQ9NS37 354 aa9.13□□□□□ -0.95
CXCL13-202ENST00000506590 CHRDL2Q6WN34 429 aa9.11□□□□□ -0.95
CXCL13-202ENST00000506590 PLEKHG5O94827 1062 aa9.07□□□□□ -0.96
CXCL13-202ENST00000506590 DCAF8L2P0C7V8 631 aa9.04□□□□□ -0.96
CXCL13-202ENST00000506590 PRKAR2AP13861 404 aaKnown RBP9.04□□□□□ -0.96
CXCL13-202ENST00000506590 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
CXCL13-202ENST00000506590 SPOCK2Q92563 424 aa9.04□□□□□ -0.96
CXCL13-202ENST00000506590 MNX1P50219 401 aaPredicted RBP9.03□□□□□ -0.96
CXCL13-202ENST00000506590 FXR2P51116 673 aaKnown RBP eCLIP9.03□□□□□ -0.96
CXCL13-202ENST00000506590 AMER1Q5JTC6 1135 aaPredicted RBP9.03□□□□□ -0.96
CXCL13-202ENST00000506590 SLC24A1O60721 1099 aa8.98□□□□□ -0.97
CXCL13-202ENST00000506590 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
CXCL13-202ENST00000506590 CIZ1Q9ULV3 898 aaPredicted RBP8.96□□□□□ -0.98
CXCL13-202ENST00000506590 FARP1Q9Y4F1 1045 aaPredicted RBP8.96□□□□□ -0.98
CXCL13-202ENST00000506590 NUBP1P53384 320 aa8.95□□□□□ -0.98
CXCL13-202ENST00000506590 RB1CC1Q8TDY2 1594 aa8.94□□□□□ -0.98
CXCL13-202ENST00000506590 PKD2Q13563 968 aa8.93□□□□□ -0.98
CXCL13-202ENST00000506590 RASEFQ8IZ41 740 aa8.93□□□□□ -0.98
CXCL13-202ENST00000506590 DCAF8Q5TAQ9 597 aa8.91□□□□□ -0.98
CXCL13-202ENST00000506590 NPM1P06748 294 aaKnown RBP eCLIP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms