RNA–Protein interactions for RNA: ENST00000506367.1

PKD2-203, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

TSL 3

Gene PKD2, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-203ENST00000506367 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
PKD2-203ENST00000506367 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
PKD2-203ENST00000506367 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
PKD2-203ENST00000506367 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
PKD2-203ENST00000506367 PLPPR3Q6T4P5 718 aa15.47■□□□□ 0.07
PKD2-203ENST00000506367 FOXD1Q16676 465 aa14.82□□□□□ -0.04
PKD2-203ENST00000506367 ADRA2BP18089 450 aa14.7□□□□□ -0.06
PKD2-203ENST00000506367 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
PKD2-203ENST00000506367 KCNA4P22459 653 aa14.05□□□□□ -0.16
PKD2-203ENST00000506367 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
PKD2-203ENST00000506367 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
PKD2-203ENST00000506367 EHMT2Q96KQ7 1210 aa13.59□□□□□ -0.23
PKD2-203ENST00000506367 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
PKD2-203ENST00000506367 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
PKD2-203ENST00000506367 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
PKD2-203ENST00000506367 MSH5O43196 834 aa13.31□□□□□ -0.28
PKD2-203ENST00000506367 CSRNP3Q8WYN3 585 aa13.24□□□□□ -0.29
PKD2-203ENST00000506367 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
PKD2-203ENST00000506367 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
PKD2-203ENST00000506367 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
PKD2-203ENST00000506367 ZBTB22O15209 634 aa13.03□□□□□ -0.32
PKD2-203ENST00000506367 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
PKD2-203ENST00000506367 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
PKD2-203ENST00000506367 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
PKD2-203ENST00000506367 HOXD11P31277 338 aaPredicted RBP12.72□□□□□ -0.37
PKD2-203ENST00000506367 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
PKD2-203ENST00000506367 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
PKD2-203ENST00000506367 SLC4A2P04920 1241 aa12.58□□□□□ -0.4
PKD2-203ENST00000506367 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
PKD2-203ENST00000506367 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
PKD2-203ENST00000506367 ATXN8OSP0DMR3 200 aa12.12□□□□□ -0.47
PKD2-203ENST00000506367 ATF5Q9Y2D1 282 aaPredicted RBP12.09□□□□□ -0.47
PKD2-203ENST00000506367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.05□□□□□ -0.482e-7■■■■□ 26.6
PKD2-203ENST00000506367 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
PKD2-203ENST00000506367 FKBP8Q14318 412 aa11.88□□□□□ -0.51
PKD2-203ENST00000506367 SAMD1Q6SPF0 538 aaPredicted RBP11.84□□□□□ -0.51
PKD2-203ENST00000506367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
PKD2-203ENST00000506367 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
PKD2-203ENST00000506367 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
PKD2-203ENST00000506367 ZNF219Q9P2Y4 722 aaPredicted RBP11.69□□□□□ -0.54
PKD2-203ENST00000506367 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
PKD2-203ENST00000506367 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
PKD2-203ENST00000506367 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
PKD2-203ENST00000506367 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
PKD2-203ENST00000506367 APLP2Q06481 763 aa11.51□□□□□ -0.57
PKD2-203ENST00000506367 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
PKD2-203ENST00000506367 POTEDQ86YR6 584 aa11.47□□□□□ -0.57
PKD2-203ENST00000506367 CAPN15O75808 1086 aa11.4□□□□□ -0.58
PKD2-203ENST00000506367 POLA2Q14181 598 aa11.4□□□□□ -0.58
PKD2-203ENST00000506367 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
PKD2-203ENST00000506367 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
PKD2-203ENST00000506367 PROM2Q8N271 834 aa11.34□□□□□ -0.59
PKD2-203ENST00000506367 ABCB7O75027 752 aa11.32□□□□□ -0.6
PKD2-203ENST00000506367 FBLN2P98095 1184 aa11.29□□□□□ -0.6
PKD2-203ENST00000506367 CCDC180Q9P1Z9 1646 aa11.22□□□□□ -0.61
PKD2-203ENST00000506367 SLC24A1O60721 1099 aa11.21□□□□□ -0.61
PKD2-203ENST00000506367 DSG3P32926 999 aa11.17□□□□□ -0.62
PKD2-203ENST00000506367 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
PKD2-203ENST00000506367 VASPP50552 380 aaPredicted RBP11.14□□□□□ -0.63
PKD2-203ENST00000506367 ABCC9O60706 1549 aa11.11□□□□□ -0.63
PKD2-203ENST00000506367 ZBTB12Q9Y330 459 aaPredicted RBP11.1□□□□□ -0.63
PKD2-203ENST00000506367 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
PKD2-203ENST00000506367 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
PKD2-203ENST00000506367 SSUH2Q9Y2M2 353 aa10.98□□□□□ -0.65
PKD2-203ENST00000506367 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
PKD2-203ENST00000506367 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
PKD2-203ENST00000506367 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
PKD2-203ENST00000506367 PKD2Q13563 968 aa10.91□□□□□ -0.66
PKD2-203ENST00000506367 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
PKD2-203ENST00000506367 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
PKD2-203ENST00000506367 CACNB1Q02641 598 aaPredicted RBP10.86□□□□□ -0.67
PKD2-203ENST00000506367 SPOCK2Q92563 424 aa10.76□□□□□ -0.69
PKD2-203ENST00000506367 STAG3Q9UJ98 1225 aa10.76□□□□□ -0.69
PKD2-203ENST00000506367 KLHL34Q8N239 644 aa10.75□□□□□ -0.69
PKD2-203ENST00000506367 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
PKD2-203ENST00000506367 PLCD3Q8N3E9 789 aa10.72□□□□□ -0.69
PKD2-203ENST00000506367 PLCB2Q00722 1185 aa10.71□□□□□ -0.69
PKD2-203ENST00000506367 MIER1Q8N108 512 aa10.69□□□□□ -0.7
PKD2-203ENST00000506367 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.7
PKD2-203ENST00000506367 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
PKD2-203ENST00000506367 NACADO15069 1562 aa10.65□□□□□ -0.71
PKD2-203ENST00000506367 RGL2O15211 777 aa10.64□□□□□ -0.71
PKD2-203ENST00000506367 NPM1P06748 294 aaKnown RBP eCLIP10.64□□□□□ -0.71
PKD2-203ENST00000506367 MYO15BQ96JP2 1530 aa10.59□□□□□ -0.71
PKD2-203ENST00000506367 ZCCHC6Q5VYS8 1495 aaKnown RBP10.58□□□□□ -0.72
PKD2-203ENST00000506367 HAP1P54257 671 aaPredicted RBP10.55□□□□□ -0.72
PKD2-203ENST00000506367 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
PKD2-203ENST00000506367 DCAF1Q9Y4B6 1507 aa10.5□□□□□ -0.73
PKD2-203ENST00000506367 AKT1S1Q96B36 256 aa10.49□□□□□ -0.73
PKD2-203ENST00000506367 NUBP1P53384 320 aa10.48□□□□□ -0.73
PKD2-203ENST00000506367 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
PKD2-203ENST00000506367 CREBZFQ9NS37 354 aa10.48□□□□□ -0.73
PKD2-203ENST00000506367 MNX1P50219 401 aaPredicted RBP10.47□□□□□ -0.73
PKD2-203ENST00000506367 REM2Q8IYK8 340 aaPredicted RBP10.47□□□□□ -0.73
PKD2-203ENST00000506367 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
PKD2-203ENST00000506367 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
PKD2-203ENST00000506367 SPDYE1Q8NFV5 336 aaPredicted RBP10.46□□□□□ -0.73
PKD2-203ENST00000506367 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
PKD2-203ENST00000506367 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
PKD2-203ENST00000506367 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms