RNA–Protein interactions for RNA: ENST00000506118.1

CNGA1-205, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 3

Gene CNGA1, Length 701 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-205ENST00000506118 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
CNGA1-205ENST00000506118 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
CNGA1-205ENST00000506118 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
CNGA1-205ENST00000506118 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
CNGA1-205ENST00000506118 FOXD1Q16676 465 aa19.11■□□□□ 0.65
CNGA1-205ENST00000506118 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
CNGA1-205ENST00000506118 MSH5O43196 834 aa18■□□□□ 0.47
CNGA1-205ENST00000506118 PIAS4Q8N2W9 510 aaPredicted RBP17.75■□□□□ 0.43
CNGA1-205ENST00000506118 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
CNGA1-205ENST00000506118 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
CNGA1-205ENST00000506118 ADRA2BP18089 450 aa17.46■□□□□ 0.39
CNGA1-205ENST00000506118 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
CNGA1-205ENST00000506118 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
CNGA1-205ENST00000506118 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
CNGA1-205ENST00000506118 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
CNGA1-205ENST00000506118 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
CNGA1-205ENST00000506118 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
CNGA1-205ENST00000506118 HOXD11P31277 338 aaPredicted RBP15.32■□□□□ 0.04
CNGA1-205ENST00000506118 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
CNGA1-205ENST00000506118 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
CNGA1-205ENST00000506118 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
CNGA1-205ENST00000506118 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
CNGA1-205ENST00000506118 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
CNGA1-205ENST00000506118 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
CNGA1-205ENST00000506118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.63□□□□□ -0.07
CNGA1-205ENST00000506118 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
CNGA1-205ENST00000506118 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
CNGA1-205ENST00000506118 POTEHQ6S545 545 aa14.33□□□□□ -0.12
CNGA1-205ENST00000506118 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
CNGA1-205ENST00000506118 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
CNGA1-205ENST00000506118 DSG3P32926 999 aa14.23□□□□□ -0.13
CNGA1-205ENST00000506118 CAPN15O75808 1086 aa14.22□□□□□ -0.13
CNGA1-205ENST00000506118 ABCB7O75027 752 aa13.89□□□□□ -0.19
CNGA1-205ENST00000506118 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
CNGA1-205ENST00000506118 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
CNGA1-205ENST00000506118 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
CNGA1-205ENST00000506118 CCDC180Q9P1Z9 1646 aa13.76□□□□□ -0.21
CNGA1-205ENST00000506118 APLP2Q06481 763 aa13.74□□□□□ -0.21
CNGA1-205ENST00000506118 KCNA4P22459 653 aa13.73□□□□□ -0.21
CNGA1-205ENST00000506118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.63□□□□□ -0.23
CNGA1-205ENST00000506118 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
CNGA1-205ENST00000506118 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
CNGA1-205ENST00000506118 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
CNGA1-205ENST00000506118 ABCC9O60706 1549 aa13.51□□□□□ -0.25
CNGA1-205ENST00000506118 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
CNGA1-205ENST00000506118 POLA2Q14181 598 aa13.39□□□□□ -0.27
CNGA1-205ENST00000506118 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
CNGA1-205ENST00000506118 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
CNGA1-205ENST00000506118 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
CNGA1-205ENST00000506118 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
CNGA1-205ENST00000506118 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
CNGA1-205ENST00000506118 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
CNGA1-205ENST00000506118 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
CNGA1-205ENST00000506118 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
CNGA1-205ENST00000506118 RB1CC1Q8TDY2 1594 aa13□□□□□ -0.33
CNGA1-205ENST00000506118 HAX1O00165 279 aa12.95□□□□□ -0.34
CNGA1-205ENST00000506118 NACADO15069 1562 aa12.94□□□□□ -0.34
CNGA1-205ENST00000506118 PITPNM1O00562 1244 aa12.94□□□□□ -0.34
CNGA1-205ENST00000506118 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
CNGA1-205ENST00000506118 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
CNGA1-205ENST00000506118 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
CNGA1-205ENST00000506118 MYO15BQ96JP2 1530 aa12.84□□□□□ -0.35
CNGA1-205ENST00000506118 EVX2Q03828 476 aa12.8□□□□□ -0.36
CNGA1-205ENST00000506118 UNC13AQ9UPW8 1703 aa12.77□□□□□ -0.36
CNGA1-205ENST00000506118 DCAF8L2P0C7V8 631 aa12.74□□□□□ -0.37
CNGA1-205ENST00000506118 DCAF1Q9Y4B6 1507 aa12.69□□□□□ -0.38
CNGA1-205ENST00000506118 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
CNGA1-205ENST00000506118 ZBTB22O15209 634 aa12.63□□□□□ -0.39
CNGA1-205ENST00000506118 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
CNGA1-205ENST00000506118 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
CNGA1-205ENST00000506118 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
CNGA1-205ENST00000506118 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
CNGA1-205ENST00000506118 PRKAR2AP13861 404 aaKnown RBP12.59□□□□□ -0.39
CNGA1-205ENST00000506118 CLEC11AQ9Y240 323 aa12.56□□□□□ -0.4
CNGA1-205ENST00000506118 PABPN1Q86U42 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
CNGA1-205ENST00000506118 FBLN2P98095 1184 aa12.53□□□□□ -0.4
CNGA1-205ENST00000506118 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
CNGA1-205ENST00000506118 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
CNGA1-205ENST00000506118 SHROOM4Q9ULL8 1493 aa12.5□□□□□ -0.41
CNGA1-205ENST00000506118 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
CNGA1-205ENST00000506118 GABBR2O75899 941 aa12.44□□□□□ -0.42
CNGA1-205ENST00000506118 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
CNGA1-205ENST00000506118 SCRIBQ14160 1630 aa12.43□□□□□ -0.42
CNGA1-205ENST00000506118 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
CNGA1-205ENST00000506118 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
CNGA1-205ENST00000506118 LHX8Q68G74 356 aa12.39□□□□□ -0.43
CNGA1-205ENST00000506118 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
CNGA1-205ENST00000506118 CC2D2AQ9P2K1 1620 aa12.28□□□□□ -0.44
CNGA1-205ENST00000506118 EIF4G1Q04637 1599 aaKnown RBP12.27□□□□□ -0.44
CNGA1-205ENST00000506118 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
CNGA1-205ENST00000506118 POTEIP0CG38 1075 aa12.2□□□□□ -0.46
CNGA1-205ENST00000506118 CECR2Q9BXF3 1484 aa12.19□□□□□ -0.46
CNGA1-205ENST00000506118 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
CNGA1-205ENST00000506118 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
CNGA1-205ENST00000506118 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
CNGA1-205ENST00000506118 EHMT2Q96KQ7 1210 aa12.05□□□□□ -0.48
CNGA1-205ENST00000506118 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
CNGA1-205ENST00000506118 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
CNGA1-205ENST00000506118 CLCN6P51797 869 aa11.97□□□□□ -0.49
CNGA1-205ENST00000506118 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms