RNA–Protein interactions for RNA: ENST00000504115.1

CCNH-202, Transcript of cyclin H, humanhuman

TSL 2

Gene CCNH, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-202ENST00000504115 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
CCNH-202ENST00000504115 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
CCNH-202ENST00000504115 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
CCNH-202ENST00000504115 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
CCNH-202ENST00000504115 FOXD1Q16676 465 aa18.34■□□□□ 0.53
CCNH-202ENST00000504115 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
CCNH-202ENST00000504115 MSH5O43196 834 aa17.38■□□□□ 0.37
CCNH-202ENST00000504115 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
CCNH-202ENST00000504115 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
CCNH-202ENST00000504115 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
CCNH-202ENST00000504115 ADRA2BP18089 450 aa16.6■□□□□ 0.25
CCNH-202ENST00000504115 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
CCNH-202ENST00000504115 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
CCNH-202ENST00000504115 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
CCNH-202ENST00000504115 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
CCNH-202ENST00000504115 RNF39Q9H2S5 420 aa14.8□□□□□ -0.04
CCNH-202ENST00000504115 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
CCNH-202ENST00000504115 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
CCNH-202ENST00000504115 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
CCNH-202ENST00000504115 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
CCNH-202ENST00000504115 RNF216Q9NWF9 866 aaPredicted RBP14.45□□□□□ -0.1
CCNH-202ENST00000504115 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
CCNH-202ENST00000504115 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
CCNH-202ENST00000504115 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
CCNH-202ENST00000504115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.184e-7■■■□□ 15.3
CCNH-202ENST00000504115 POTEHQ6S545 545 aa13.89□□□□□ -0.19
CCNH-202ENST00000504115 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
CCNH-202ENST00000504115 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
CCNH-202ENST00000504115 DSG3P32926 999 aa13.65□□□□□ -0.22
CCNH-202ENST00000504115 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
CCNH-202ENST00000504115 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
CCNH-202ENST00000504115 CAPN15O75808 1086 aa13.53□□□□□ -0.24
CCNH-202ENST00000504115 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
CCNH-202ENST00000504115 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
CCNH-202ENST00000504115 ABCB7O75027 752 aa13.18□□□□□ -0.3
CCNH-202ENST00000504115 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
CCNH-202ENST00000504115 APLP2Q06481 763 aa13.17□□□□□ -0.3
CCNH-202ENST00000504115 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
CCNH-202ENST00000504115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
CCNH-202ENST00000504115 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
CCNH-202ENST00000504115 CCDC180Q9P1Z9 1646 aa12.99□□□□□ -0.33
CCNH-202ENST00000504115 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
CCNH-202ENST00000504115 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
CCNH-202ENST00000504115 KCNA4P22459 653 aa12.88□□□□□ -0.35
CCNH-202ENST00000504115 ABCC9O60706 1549 aa12.83□□□□□ -0.35
CCNH-202ENST00000504115 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
CCNH-202ENST00000504115 POLA2Q14181 598 aa12.72□□□□□ -0.37
CCNH-202ENST00000504115 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
CCNH-202ENST00000504115 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
CCNH-202ENST00000504115 PIP4P2Q8N4L2 257 aa12.54□□□□□ -0.4
CCNH-202ENST00000504115 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
CCNH-202ENST00000504115 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
CCNH-202ENST00000504115 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCNH-202ENST00000504115 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
CCNH-202ENST00000504115 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
CCNH-202ENST00000504115 HAX1O00165 279 aa12.38□□□□□ -0.43
CCNH-202ENST00000504115 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
CCNH-202ENST00000504115 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
CCNH-202ENST00000504115 EVX2Q03828 476 aa12.25□□□□□ -0.45
CCNH-202ENST00000504115 NACADO15069 1562 aa12.24□□□□□ -0.45
CCNH-202ENST00000504115 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.45
CCNH-202ENST00000504115 MYO15BQ96JP2 1530 aa12.11□□□□□ -0.47
CCNH-202ENST00000504115 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
CCNH-202ENST00000504115 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
CCNH-202ENST00000504115 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
CCNH-202ENST00000504115 SPDYE2Q495Y8 402 aa12.04□□□□□ -0.48
CCNH-202ENST00000504115 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
CCNH-202ENST00000504115 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
CCNH-202ENST00000504115 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
CCNH-202ENST00000504115 PRKAR2AP13861 404 aaKnown RBP12.01□□□□□ -0.49
CCNH-202ENST00000504115 ZCCHC6Q5VYS8 1495 aaKnown RBP12□□□□□ -0.49
CCNH-202ENST00000504115 DCAF1Q9Y4B6 1507 aa11.97□□□□□ -0.49
CCNH-202ENST00000504115 LHX8Q68G74 356 aa11.95□□□□□ -0.5
CCNH-202ENST00000504115 SPDYE1Q8NFV5 336 aaPredicted RBP11.95□□□□□ -0.5
CCNH-202ENST00000504115 GABBR2O75899 941 aa11.94□□□□□ -0.5
CCNH-202ENST00000504115 BICRAQ9NZM4 1560 aa11.92□□□□□ -0.5
CCNH-202ENST00000504115 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCNH-202ENST00000504115 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
CCNH-202ENST00000504115 FBLN2P98095 1184 aa11.89□□□□□ -0.51
CCNH-202ENST00000504115 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
CCNH-202ENST00000504115 ZBTB22O15209 634 aa11.86□□□□□ -0.51
CCNH-202ENST00000504115 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
CCNH-202ENST00000504115 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
CCNH-202ENST00000504115 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
CCNH-202ENST00000504115 SCRIBQ14160 1630 aa11.78□□□□□ -0.52
CCNH-202ENST00000504115 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
CCNH-202ENST00000504115 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
CCNH-202ENST00000504115 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
CCNH-202ENST00000504115 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
CCNH-202ENST00000504115 CC2D2AQ9P2K1 1620 aa11.63□□□□□ -0.55
CCNH-202ENST00000504115 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
CCNH-202ENST00000504115 CD44P16070 742 aaKnown RBP11.61□□□□□ -0.55
CCNH-202ENST00000504115 CLCN6P51797 869 aa11.6□□□□□ -0.55
CCNH-202ENST00000504115 CECR2Q9BXF3 1484 aa11.57□□□□□ -0.56
CCNH-202ENST00000504115 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
CCNH-202ENST00000504115 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
CCNH-202ENST00000504115 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
CCNH-202ENST00000504115 DCBLD2Q96PD2 775 aa11.45□□□□□ -0.58
CCNH-202ENST00000504115 OTUD5Q96G74 571 aa11.37□□□□□ -0.59
CCNH-202ENST00000504115 ZRANB1Q9UGI0 708 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms