RNA–Protein interactions for RNA: ENST00000498520.1

NDUFS1-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S1, humanhuman

TSL 2

Gene NDUFS1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS1-210ENST00000498520 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
NDUFS1-210ENST00000498520 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
NDUFS1-210ENST00000498520 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
NDUFS1-210ENST00000498520 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
NDUFS1-210ENST00000498520 FOXD1Q16676 465 aa20.09■□□□□ 0.81
NDUFS1-210ENST00000498520 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
NDUFS1-210ENST00000498520 MSH5O43196 834 aa18.85■□□□□ 0.61
NDUFS1-210ENST00000498520 PIAS4Q8N2W9 510 aaPredicted RBP18.8■□□□□ 0.6
NDUFS1-210ENST00000498520 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
NDUFS1-210ENST00000498520 ADRA2BP18089 450 aa18.72■□□□□ 0.59
NDUFS1-210ENST00000498520 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
NDUFS1-210ENST00000498520 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
NDUFS1-210ENST00000498520 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
NDUFS1-210ENST00000498520 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
NDUFS1-210ENST00000498520 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
NDUFS1-210ENST00000498520 KCNA4P22459 653 aa16.6■□□□□ 0.25
NDUFS1-210ENST00000498520 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
NDUFS1-210ENST00000498520 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
NDUFS1-210ENST00000498520 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
NDUFS1-210ENST00000498520 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
NDUFS1-210ENST00000498520 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
NDUFS1-210ENST00000498520 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
NDUFS1-210ENST00000498520 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
NDUFS1-210ENST00000498520 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
NDUFS1-210ENST00000498520 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
NDUFS1-210ENST00000498520 C1QBPQ07021 282 aaKnown RBP15.85■□□□□ 0.13
NDUFS1-210ENST00000498520 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
NDUFS1-210ENST00000498520 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
NDUFS1-210ENST00000498520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.11
NDUFS1-210ENST00000498520 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
NDUFS1-210ENST00000498520 U3KPZ7 1027 aaPredicted RBP15.38■□□□□ 0.05
NDUFS1-210ENST00000498520 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
NDUFS1-210ENST00000498520 ZBTB22O15209 634 aa15.32■□□□□ 0.04
NDUFS1-210ENST00000498520 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
NDUFS1-210ENST00000498520 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
NDUFS1-210ENST00000498520 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
NDUFS1-210ENST00000498520 CAPN15O75808 1086 aa15.13■□□□□ 0.01
NDUFS1-210ENST00000498520 DSG3P32926 999 aa15.03■□□□□ -0
NDUFS1-210ENST00000498520 APLP2Q06481 763 aa15.02■□□□□ -0
NDUFS1-210ENST00000498520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
NDUFS1-210ENST00000498520 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
NDUFS1-210ENST00000498520 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
NDUFS1-210ENST00000498520 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
NDUFS1-210ENST00000498520 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
NDUFS1-210ENST00000498520 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
NDUFS1-210ENST00000498520 ABCB7O75027 752 aa14.77□□□□□ -0.05
NDUFS1-210ENST00000498520 ATXN8OSP0DMR3 200 aa14.55□□□□□ -0.08
NDUFS1-210ENST00000498520 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
NDUFS1-210ENST00000498520 POLA2Q14181 598 aa14.5□□□□□ -0.09
NDUFS1-210ENST00000498520 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
NDUFS1-210ENST00000498520 ABCC9O60706 1549 aa14.39□□□□□ -0.11
NDUFS1-210ENST00000498520 POTEHQ6S545 545 aa14.37□□□□□ -0.11
NDUFS1-210ENST00000498520 ZBTB12Q9Y330 459 aaPredicted RBP14.25□□□□□ -0.13
NDUFS1-210ENST00000498520 CCDC180Q9P1Z9 1646 aa14.25□□□□□ -0.13
NDUFS1-210ENST00000498520 CHRDL2Q6WN34 429 aa14.04□□□□□ -0.16
NDUFS1-210ENST00000498520 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
NDUFS1-210ENST00000498520 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
NDUFS1-210ENST00000498520 FBLN2P98095 1184 aa13.9□□□□□ -0.18
NDUFS1-210ENST00000498520 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
NDUFS1-210ENST00000498520 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
NDUFS1-210ENST00000498520 FKBP8Q14318 412 aa13.86□□□□□ -0.19
NDUFS1-210ENST00000498520 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
NDUFS1-210ENST00000498520 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
NDUFS1-210ENST00000498520 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
NDUFS1-210ENST00000498520 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
NDUFS1-210ENST00000498520 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
NDUFS1-210ENST00000498520 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
NDUFS1-210ENST00000498520 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
NDUFS1-210ENST00000498520 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
NDUFS1-210ENST00000498520 SSUH2Q9Y2M2 353 aa13.59□□□□□ -0.23
NDUFS1-210ENST00000498520 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.23
NDUFS1-210ENST00000498520 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
NDUFS1-210ENST00000498520 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
NDUFS1-210ENST00000498520 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
NDUFS1-210ENST00000498520 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
NDUFS1-210ENST00000498520 NACADO15069 1562 aa13.46□□□□□ -0.25
NDUFS1-210ENST00000498520 HAX1O00165 279 aa13.45□□□□□ -0.26
NDUFS1-210ENST00000498520 DCAF8L2P0C7V8 631 aa13.41□□□□□ -0.26
NDUFS1-210ENST00000498520 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
NDUFS1-210ENST00000498520 PROM2Q8N271 834 aa13.4□□□□□ -0.26
NDUFS1-210ENST00000498520 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
NDUFS1-210ENST00000498520 BICRAQ9NZM4 1560 aa13.32□□□□□ -0.28
NDUFS1-210ENST00000498520 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
NDUFS1-210ENST00000498520 EVX2Q03828 476 aa13.24□□□□□ -0.29
NDUFS1-210ENST00000498520 CHADLQ6NUI6 762 aa13.22□□□□□ -0.29
NDUFS1-210ENST00000498520 MYO15BQ96JP2 1530 aa13.21□□□□□ -0.29
NDUFS1-210ENST00000498520 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
NDUFS1-210ENST00000498520 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
NDUFS1-210ENST00000498520 VASPP50552 380 aaPredicted RBP13.09□□□□□ -0.31
NDUFS1-210ENST00000498520 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
NDUFS1-210ENST00000498520 ZCCHC6Q5VYS8 1495 aaKnown RBP13.08□□□□□ -0.32
NDUFS1-210ENST00000498520 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
NDUFS1-210ENST00000498520 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.32
NDUFS1-210ENST00000498520 DCAF1Q9Y4B6 1507 aa13.02□□□□□ -0.33
NDUFS1-210ENST00000498520 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
NDUFS1-210ENST00000498520 GABBR2O75899 941 aa12.98□□□□□ -0.33
NDUFS1-210ENST00000498520 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
NDUFS1-210ENST00000498520 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
NDUFS1-210ENST00000498520 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
NDUFS1-210ENST00000498520 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms