RNA–Protein interactions for RNA: ENST00000498378.5

SPEG-224, Transcript of SPEG complex locus, humanhuman

TSL 2

Gene SPEG, Length 3,874 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-224ENST00000498378 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
SPEG-224ENST00000498378 DCAF8L2P0C7V8 631 aa25.67■■□□□ 1.7
SPEG-224ENST00000498378 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
SPEG-224ENST00000498378 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
SPEG-224ENST00000498378 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
SPEG-224ENST00000498378 HRCP23327 699 aa23.8■■□□□ 1.4
SPEG-224ENST00000498378 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
SPEG-224ENST00000498378 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
SPEG-224ENST00000498378 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
SPEG-224ENST00000498378 LOC105371045A0A1W2PR82 267 aa23.32■■□□□ 1.32
SPEG-224ENST00000498378 ABCC9O60706 1549 aa23.29■■□□□ 1.32
SPEG-224ENST00000498378 MYO15BQ96JP2 1530 aa23.29■■□□□ 1.32
SPEG-224ENST00000498378 ZCCHC6Q5VYS8 1495 aaKnown RBP23.22■■□□□ 1.31
SPEG-224ENST00000498378 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
SPEG-224ENST00000498378 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
SPEG-224ENST00000498378 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
SPEG-224ENST00000498378 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
SPEG-224ENST00000498378 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
SPEG-224ENST00000498378 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
SPEG-224ENST00000498378 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
SPEG-224ENST00000498378 SCRIBQ14160 1630 aa22.63■■□□□ 1.21
SPEG-224ENST00000498378 PELP1Q8IZL8 1130 aaKnown RBP22.51■■□□□ 1.19
SPEG-224ENST00000498378 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
SPEG-224ENST00000498378 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
SPEG-224ENST00000498378 RANGAP1P46060 587 aaPredicted RBP22.32■■□□□ 1.16
SPEG-224ENST00000498378 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
SPEG-224ENST00000498378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
SPEG-224ENST00000498378 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
SPEG-224ENST00000498378 RSF1Q96T23 1441 aaPredicted RBP22.12■■□□□ 1.13
SPEG-224ENST00000498378 CENPBP07199 599 aaPredicted RBP22.09■■□□□ 1.13
SPEG-224ENST00000498378 NACADO15069 1562 aa22.02■■□□□ 1.12
SPEG-224ENST00000498378 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
SPEG-224ENST00000498378 DIEXFQ68CQ4 756 aaKnown RBP22■■□□□ 1.11
SPEG-224ENST00000498378 ACIN1Q9UKV3 1341 aaKnown RBP21.98■■□□□ 1.11
SPEG-224ENST00000498378 YTHDC1Q96MU7 727 aaKnown RBP21.98■■□□□ 1.11
SPEG-224ENST00000498378 GTF3C3Q9Y5Q9 886 aa21.97■■□□□ 1.11
SPEG-224ENST00000498378 NEUROD1Q13562 356 aa21.96■■□□□ 1.11
SPEG-224ENST00000498378 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
SPEG-224ENST00000498378 APLP2Q06481 763 aa21.93■■□□□ 1.1
SPEG-224ENST00000498378 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
SPEG-224ENST00000498378 ATP1B4Q9UN42 357 aaPredicted RBP21.66■■□□□ 1.06
SPEG-224ENST00000498378 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
SPEG-224ENST00000498378 ZNF316A6NFI3 1004 aaPredicted RBP21.57■■□□□ 1.04
SPEG-224ENST00000498378 CSRNP3Q8WYN3 585 aa21.53■■□□□ 1.04
SPEG-224ENST00000498378 MYT1Q01538 1121 aa21.53■■□□□ 1.04
SPEG-224ENST00000498378 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
SPEG-224ENST00000498378 WIZO95785 1651 aa21.46■■□□□ 1.03
SPEG-224ENST00000498378 MIER1Q8N108 512 aa21.38■■□□□ 1.01
SPEG-224ENST00000498378 ITGAEP38570 1179 aa21.33■■□□□ 1
SPEG-224ENST00000498378 CEP162Q5TB80 1403 aa21.31■■□□□ 1
SPEG-224ENST00000498378 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
SPEG-224ENST00000498378 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
SPEG-224ENST00000498378 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
SPEG-224ENST00000498378 SOGA1O94964 1423 aa21.18■□□□□ 0.98
SPEG-224ENST00000498378 WRNQ14191 1432 aaPredicted RBP eCLIP21.17■□□□□ 0.98
SPEG-224ENST00000498378 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
SPEG-224ENST00000498378 TNIKQ9UKE5 1360 aa21.12■□□□□ 0.97
SPEG-224ENST00000498378 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
SPEG-224ENST00000498378 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
SPEG-224ENST00000498378 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
SPEG-224ENST00000498378 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
SPEG-224ENST00000498378 BCANQ96GW7 911 aa20.93■□□□□ 0.94
SPEG-224ENST00000498378 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
SPEG-224ENST00000498378 CLIP1P30622 1438 aa20.91■□□□□ 0.94
SPEG-224ENST00000498378 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.93
SPEG-224ENST00000498378 EEA1Q15075 1411 aa20.88■□□□□ 0.93
SPEG-224ENST00000498378 SMARCA2P51531 1590 aa20.87■□□□□ 0.93
SPEG-224ENST00000498378 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
SPEG-224ENST00000498378 FBLN2P98095 1184 aa20.82■□□□□ 0.92
SPEG-224ENST00000498378 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
SPEG-224ENST00000498378 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
SPEG-224ENST00000498378 NEFLP07196 543 aa20.74■□□□□ 0.91
SPEG-224ENST00000498378 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
SPEG-224ENST00000498378 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
SPEG-224ENST00000498378 VPS8Q8N3P4 1428 aa20.67■□□□□ 0.9
SPEG-224ENST00000498378 FKBP8Q14318 412 aa20.65■□□□□ 0.9
SPEG-224ENST00000498378 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
SPEG-224ENST00000498378 DDX10Q13206 875 aaKnown RBP20.64■□□□□ 0.89
SPEG-224ENST00000498378 UNC13AQ9UPW8 1703 aa20.64■□□□□ 0.89
SPEG-224ENST00000498378 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
SPEG-224ENST00000498378 CUX2O14529 1486 aa20.6■□□□□ 0.89
SPEG-224ENST00000498378 KCNH8Q96L42 1107 aa20.59■□□□□ 0.89
SPEG-224ENST00000498378 HIRIP3Q9BW71 556 aaPredicted RBP20.58■□□□□ 0.88
SPEG-224ENST00000498378 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
SPEG-224ENST00000498378 TSHZ2Q9NRE2 1034 aa20.57■□□□□ 0.88
SPEG-224ENST00000498378 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
SPEG-224ENST00000498378 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
SPEG-224ENST00000498378 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
SPEG-224ENST00000498378 TRIM52Q96A61 297 aa20.53■□□□□ 0.88
SPEG-224ENST00000498378 ANP32EQ9BTT0 268 aa20.51■□□□□ 0.87
SPEG-224ENST00000498378 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
SPEG-224ENST00000498378 CARMIL1Q5VZK9 1371 aa20.49■□□□□ 0.87
SPEG-224ENST00000498378 ERICH6Q7L0X2 663 aa20.46■□□□□ 0.87
SPEG-224ENST00000498378 ANP32CO43423 234 aa20.44■□□□□ 0.86
SPEG-224ENST00000498378 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
SPEG-224ENST00000498378 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
SPEG-224ENST00000498378 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
SPEG-224ENST00000498378 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
SPEG-224ENST00000498378 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
SPEG-224ENST00000498378 CHIC2Q9UKJ5 165 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms