RNA–Protein interactions for RNA: ENST00000497520.1

HFM1-209, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 3

Gene HFM1, Length 383 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-209ENST00000497520 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
HFM1-209ENST00000497520 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
HFM1-209ENST00000497520 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
HFM1-209ENST00000497520 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
HFM1-209ENST00000497520 FOXD1Q16676 465 aa18.47■□□□□ 0.55
HFM1-209ENST00000497520 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
HFM1-209ENST00000497520 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
HFM1-209ENST00000497520 ADRA2BP18089 450 aa17.7■□□□□ 0.42
HFM1-209ENST00000497520 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
HFM1-209ENST00000497520 MSH5O43196 834 aa17.04■□□□□ 0.32
HFM1-209ENST00000497520 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
HFM1-209ENST00000497520 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
HFM1-209ENST00000497520 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
HFM1-209ENST00000497520 POTEDQ86YR6 584 aa15.99■□□□□ 0.15
HFM1-209ENST00000497520 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
HFM1-209ENST00000497520 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
HFM1-209ENST00000497520 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
HFM1-209ENST00000497520 KCNA4P22459 653 aa15.76■□□□□ 0.11
HFM1-209ENST00000497520 NPM3O75607 178 aaKnown RBP15.56■□□□□ 0.08
HFM1-209ENST00000497520 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
HFM1-209ENST00000497520 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
HFM1-209ENST00000497520 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
HFM1-209ENST00000497520 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
HFM1-209ENST00000497520 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
HFM1-209ENST00000497520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.05
HFM1-209ENST00000497520 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
HFM1-209ENST00000497520 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
HFM1-209ENST00000497520 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
HFM1-209ENST00000497520 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
HFM1-209ENST00000497520 NISCHQ9Y2I1 1504 aa14.5□□□□□ -0.09
HFM1-209ENST00000497520 ZBTB22O15209 634 aa14.49□□□□□ -0.09
HFM1-209ENST00000497520 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.09
HFM1-209ENST00000497520 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
HFM1-209ENST00000497520 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
HFM1-209ENST00000497520 CSRNP3Q8WYN3 585 aa14.34□□□□□ -0.11
HFM1-209ENST00000497520 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
HFM1-209ENST00000497520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
HFM1-209ENST00000497520 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
HFM1-209ENST00000497520 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.13
HFM1-209ENST00000497520 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
HFM1-209ENST00000497520 APLP2Q06481 763 aa14.14□□□□□ -0.15
HFM1-209ENST00000497520 CAPN15O75808 1086 aa14.11□□□□□ -0.15
HFM1-209ENST00000497520 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
HFM1-209ENST00000497520 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
HFM1-209ENST00000497520 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
HFM1-209ENST00000497520 ZNF219Q9P2Y4 722 aaPredicted RBP13.97□□□□□ -0.17
HFM1-209ENST00000497520 DSG3P32926 999 aa13.88□□□□□ -0.19
HFM1-209ENST00000497520 ABCB7O75027 752 aa13.83□□□□□ -0.2
HFM1-209ENST00000497520 POLA2Q14181 598 aa13.75□□□□□ -0.21
HFM1-209ENST00000497520 ABCC9O60706 1549 aa13.64□□□□□ -0.23
HFM1-209ENST00000497520 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
HFM1-209ENST00000497520 FBLN2P98095 1184 aa13.41□□□□□ -0.26
HFM1-209ENST00000497520 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
HFM1-209ENST00000497520 CCDC180Q9P1Z9 1646 aa13.35□□□□□ -0.27
HFM1-209ENST00000497520 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
HFM1-209ENST00000497520 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
HFM1-209ENST00000497520 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
HFM1-209ENST00000497520 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
HFM1-209ENST00000497520 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
HFM1-209ENST00000497520 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
HFM1-209ENST00000497520 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
HFM1-209ENST00000497520 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
HFM1-209ENST00000497520 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
HFM1-209ENST00000497520 FKBP8Q14318 412 aa12.97□□□□□ -0.33
HFM1-209ENST00000497520 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
HFM1-209ENST00000497520 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
HFM1-209ENST00000497520 RB1CC1Q8TDY2 1594 aa12.84□□□□□ -0.35
HFM1-209ENST00000497520 PROM2Q8N271 834 aa12.78□□□□□ -0.36
HFM1-209ENST00000497520 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
HFM1-209ENST00000497520 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
HFM1-209ENST00000497520 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
HFM1-209ENST00000497520 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
HFM1-209ENST00000497520 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
HFM1-209ENST00000497520 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
HFM1-209ENST00000497520 NACADO15069 1562 aa12.62□□□□□ -0.39
HFM1-209ENST00000497520 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
HFM1-209ENST00000497520 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.4
HFM1-209ENST00000497520 BICRAQ9NZM4 1560 aa12.54□□□□□ -0.4
HFM1-209ENST00000497520 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
HFM1-209ENST00000497520 POTEHQ6S545 545 aa12.51□□□□□ -0.41
HFM1-209ENST00000497520 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
HFM1-209ENST00000497520 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
HFM1-209ENST00000497520 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
HFM1-209ENST00000497520 CREBZFQ9NS37 354 aa12.42□□□□□ -0.42
HFM1-209ENST00000497520 MIER1Q8N108 512 aa12.39□□□□□ -0.43
HFM1-209ENST00000497520 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
HFM1-209ENST00000497520 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
HFM1-209ENST00000497520 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
HFM1-209ENST00000497520 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
HFM1-209ENST00000497520 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.44
HFM1-209ENST00000497520 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
HFM1-209ENST00000497520 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
HFM1-209ENST00000497520 MYO15BQ96JP2 1530 aa12.29□□□□□ -0.44
HFM1-209ENST00000497520 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
HFM1-209ENST00000497520 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
HFM1-209ENST00000497520 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
HFM1-209ENST00000497520 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.45
HFM1-209ENST00000497520 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
HFM1-209ENST00000497520 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
HFM1-209ENST00000497520 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms