RNA–Protein interactions for RNA: ENST00000493733.1

PCOLCE2-209, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

TSL 4

Gene PCOLCE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-209ENST00000493733 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
PCOLCE2-209ENST00000493733 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
PCOLCE2-209ENST00000493733 PHF23Q9BUL5 403 aaPredicted RBP19.53■□□□□ 0.72
PCOLCE2-209ENST00000493733 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
PCOLCE2-209ENST00000493733 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
PCOLCE2-209ENST00000493733 FOXD1Q16676 465 aa17.18■□□□□ 0.34
PCOLCE2-209ENST00000493733 ADRA2BP18089 450 aa17.07■□□□□ 0.32
PCOLCE2-209ENST00000493733 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
PCOLCE2-209ENST00000493733 KCNA4P22459 653 aa16.46■□□□□ 0.23
PCOLCE2-209ENST00000493733 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
PCOLCE2-209ENST00000493733 PPP4R3CPQ6ZMV5 832 aa16.12■□□□□ 0.17
PCOLCE2-209ENST00000493733 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
PCOLCE2-209ENST00000493733 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
PCOLCE2-209ENST00000493733 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
PCOLCE2-209ENST00000493733 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
PCOLCE2-209ENST00000493733 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
PCOLCE2-209ENST00000493733 NPM3O75607 178 aaKnown RBP15.66■□□□□ 0.1
PCOLCE2-209ENST00000493733 MSH5O43196 834 aa15.57■□□□□ 0.08
PCOLCE2-209ENST00000493733 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
PCOLCE2-209ENST00000493733 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
PCOLCE2-209ENST00000493733 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
PCOLCE2-209ENST00000493733 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
PCOLCE2-209ENST00000493733 ZBTB22O15209 634 aa15.17■□□□□ 0.02
PCOLCE2-209ENST00000493733 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
PCOLCE2-209ENST00000493733 RNF216Q9NWF9 866 aaPredicted RBP15.06■□□□□ 0
PCOLCE2-209ENST00000493733 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
PCOLCE2-209ENST00000493733 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
PCOLCE2-209ENST00000493733 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
PCOLCE2-209ENST00000493733 SLC4A2P04920 1241 aa14.64□□□□□ -0.07
PCOLCE2-209ENST00000493733 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
PCOLCE2-209ENST00000493733 ATXN8OSP0DMR3 200 aa14.34□□□□□ -0.11
PCOLCE2-209ENST00000493733 DCAF8L1A6NGE4 600 aa14.25□□□□□ -0.13
PCOLCE2-209ENST00000493733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.15
PCOLCE2-209ENST00000493733 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
PCOLCE2-209ENST00000493733 FKBP8Q14318 412 aa14.02□□□□□ -0.17
PCOLCE2-209ENST00000493733 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
PCOLCE2-209ENST00000493733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
PCOLCE2-209ENST00000493733 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
PCOLCE2-209ENST00000493733 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
PCOLCE2-209ENST00000493733 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
PCOLCE2-209ENST00000493733 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
PCOLCE2-209ENST00000493733 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
PCOLCE2-209ENST00000493733 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
PCOLCE2-209ENST00000493733 APLP2Q06481 763 aa13.68□□□□□ -0.22
PCOLCE2-209ENST00000493733 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
PCOLCE2-209ENST00000493733 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
PCOLCE2-209ENST00000493733 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.25
PCOLCE2-209ENST00000493733 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
PCOLCE2-209ENST00000493733 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
PCOLCE2-209ENST00000493733 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
PCOLCE2-209ENST00000493733 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
PCOLCE2-209ENST00000493733 POLA2Q14181 598 aa13.35□□□□□ -0.27
PCOLCE2-209ENST00000493733 ZCCHC6Q5VYS8 1495 aaKnown RBP13.35□□□□□ -0.27
PCOLCE2-209ENST00000493733 CAPN15O75808 1086 aa13.34□□□□□ -0.27
PCOLCE2-209ENST00000493733 FBLN2P98095 1184 aa13.34□□□□□ -0.27
PCOLCE2-209ENST00000493733 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
PCOLCE2-209ENST00000493733 PROM2Q8N271 834 aa13.29□□□□□ -0.28
PCOLCE2-209ENST00000493733 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
PCOLCE2-209ENST00000493733 ABCB7O75027 752 aa13.17□□□□□ -0.3
PCOLCE2-209ENST00000493733 DCAF1Q9Y4B6 1507 aa13.17□□□□□ -0.3
PCOLCE2-209ENST00000493733 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
PCOLCE2-209ENST00000493733 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
PCOLCE2-209ENST00000493733 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
PCOLCE2-209ENST00000493733 DSG3P32926 999 aa12.99□□□□□ -0.33
PCOLCE2-209ENST00000493733 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
PCOLCE2-209ENST00000493733 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
PCOLCE2-209ENST00000493733 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
PCOLCE2-209ENST00000493733 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
PCOLCE2-209ENST00000493733 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
PCOLCE2-209ENST00000493733 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
PCOLCE2-209ENST00000493733 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
PCOLCE2-209ENST00000493733 PKD2Q13563 968 aa12.84□□□□□ -0.35
PCOLCE2-209ENST00000493733 SSUH2Q9Y2M2 353 aa12.84□□□□□ -0.35
PCOLCE2-209ENST00000493733 DCAF8L2P0C7V8 631 aa12.83□□□□□ -0.36
PCOLCE2-209ENST00000493733 ABCC9O60706 1549 aa12.79□□□□□ -0.36
PCOLCE2-209ENST00000493733 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
PCOLCE2-209ENST00000493733 NACADO15069 1562 aa12.77□□□□□ -0.36
PCOLCE2-209ENST00000493733 PLCB2Q00722 1185 aa12.77□□□□□ -0.37
PCOLCE2-209ENST00000493733 KLHL34Q8N239 644 aa12.77□□□□□ -0.37
PCOLCE2-209ENST00000493733 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
PCOLCE2-209ENST00000493733 SPOCK2Q92563 424 aa12.75□□□□□ -0.37
PCOLCE2-209ENST00000493733 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
PCOLCE2-209ENST00000493733 MIER1Q8N108 512 aa12.64□□□□□ -0.39
PCOLCE2-209ENST00000493733 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
PCOLCE2-209ENST00000493733 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
PCOLCE2-209ENST00000493733 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
PCOLCE2-209ENST00000493733 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
PCOLCE2-209ENST00000493733 RGL2O15211 777 aa12.51□□□□□ -0.41
PCOLCE2-209ENST00000493733 PLEKHG5O94827 1062 aa12.5□□□□□ -0.41
PCOLCE2-209ENST00000493733 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
PCOLCE2-209ENST00000493733 ZBTB47Q9UFB7 747 aaPredicted RBP12.49□□□□□ -0.41
PCOLCE2-209ENST00000493733 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
PCOLCE2-209ENST00000493733 CIZ1Q9ULV3 898 aaPredicted RBP12.45□□□□□ -0.42
PCOLCE2-209ENST00000493733 SUPT5HO00267 1087 aaKnown RBP12.44□□□□□ -0.42
PCOLCE2-209ENST00000493733 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.44□□□□□ -0.42
PCOLCE2-209ENST00000493733 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
PCOLCE2-209ENST00000493733 VSIG10Q8N0Z9 540 aa12.38□□□□□ -0.43
PCOLCE2-209ENST00000493733 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
PCOLCE2-209ENST00000493733 POTEHQ6S545 545 aa12.35□□□□□ -0.43
PCOLCE2-209ENST00000493733 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms