RNA–Protein interactions for RNA: ENST00000493087.5

FGD4-206, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,987 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-206ENST00000493087 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
FGD4-206ENST00000493087 MYT1Q01538 1121 aa13.44□□□□□ -0.26
FGD4-206ENST00000493087 HRCP23327 699 aa13.34□□□□□ -0.27
FGD4-206ENST00000493087 NISCHQ9Y2I1 1504 aa13.12□□□□□ -0.31
FGD4-206ENST00000493087 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.33
FGD4-206ENST00000493087 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
FGD4-206ENST00000493087 PCGF6Q9BYE7 350 aa12.84□□□□□ -0.35
FGD4-206ENST00000493087 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
FGD4-206ENST00000493087 ZEB1P37275 1124 aaPredicted RBP12.48□□□□□ -0.41
FGD4-206ENST00000493087 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
FGD4-206ENST00000493087 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
FGD4-206ENST00000493087 MYO15BQ96JP2 1530 aa12.36□□□□□ -0.43
FGD4-206ENST00000493087 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
FGD4-206ENST00000493087 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
FGD4-206ENST00000493087 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.43
FGD4-206ENST00000493087 BCL11AQ9H165 835 aa12.33□□□□□ -0.44
FGD4-206ENST00000493087 SUPT5HO00267 1087 aaKnown RBP12.3□□□□□ -0.44
FGD4-206ENST00000493087 DCAF1Q9Y4B6 1507 aa12.29□□□□□ -0.44
FGD4-206ENST00000493087 CHIC1Q5VXU3 224 aa12.23□□□□□ -0.45
FGD4-206ENST00000493087 CCDC180Q9P1Z9 1646 aa12.2□□□□□ -0.46
FGD4-206ENST00000493087 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
FGD4-206ENST00000493087 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
FGD4-206ENST00000493087 ERICH6Q7L0X2 663 aa12.09□□□□□ -0.47
FGD4-206ENST00000493087 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.48
FGD4-206ENST00000493087 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
FGD4-206ENST00000493087 DIEXFQ68CQ4 756 aaKnown RBP12□□□□□ -0.49
FGD4-206ENST00000493087 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
FGD4-206ENST00000493087 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
FGD4-206ENST00000493087 YTHDC1Q96MU7 727 aaKnown RBP11.85□□□□□ -0.51
FGD4-206ENST00000493087 APLP2Q06481 763 aa11.84□□□□□ -0.51
FGD4-206ENST00000493087 CCER1Q8TC90 406 aaPredicted RBP11.78□□□□□ -0.52
FGD4-206ENST00000493087 CLSPNQ9HAW4 1339 aa11.72□□□□□ -0.53
FGD4-206ENST00000493087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.54
FGD4-206ENST00000493087 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.54
FGD4-206ENST00000493087 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
FGD4-206ENST00000493087 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
FGD4-206ENST00000493087 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
FGD4-206ENST00000493087 MIER1Q8N108 512 aa11.59□□□□□ -0.55
FGD4-206ENST00000493087 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
FGD4-206ENST00000493087 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.57
FGD4-206ENST00000493087 RBM19Q9Y4C8 960 aaKnown RBP11.42□□□□□ -0.58
FGD4-206ENST00000493087 ABCC9O60706 1549 aa11.36□□□□□ -0.59
FGD4-206ENST00000493087 UBE2Q2Q8WVN8 375 aa11.35□□□□□ -0.59
FGD4-206ENST00000493087 DEKP35659 375 aaKnown RBP11.34□□□□□ -0.59
FGD4-206ENST00000493087 BCANQ96GW7 911 aa11.34□□□□□ -0.59
FGD4-206ENST00000493087 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
FGD4-206ENST00000493087 EHMT2Q96KQ7 1210 aa11.33□□□□□ -0.6
FGD4-206ENST00000493087 SALL2Q9Y467 1007 aaPredicted RBP11.3□□□□□ -0.6
FGD4-206ENST00000493087 MSH5O43196 834 aa11.29□□□□□ -0.6
FGD4-206ENST00000493087 FKBP8Q14318 412 aa11.27□□□□□ -0.61
FGD4-206ENST00000493087 NEFLP07196 543 aa11.26□□□□□ -0.61
FGD4-206ENST00000493087 CCDC136Q96JN2 1154 aa11.25□□□□□ -0.61
FGD4-206ENST00000493087 FANCIQ9NVI1 1328 aa11.24□□□□□ -0.61
FGD4-206ENST00000493087 EIF5BO60841 1220 aaKnown RBP11.24□□□□□ -0.61
FGD4-206ENST00000493087 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
FGD4-206ENST00000493087 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
FGD4-206ENST00000493087 ITGAEP38570 1179 aa11.15□□□□□ -0.62
FGD4-206ENST00000493087 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
FGD4-206ENST00000493087 CDK11AQ9UQ88 783 aaPredicted RBP11.13□□□□□ -0.63
FGD4-206ENST00000493087 PKNOX2Q96KN3 472 aa11.1□□□□□ -0.63
FGD4-206ENST00000493087 NBR1Q14596 966 aa11.08□□□□□ -0.64
FGD4-206ENST00000493087 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
FGD4-206ENST00000493087 RTL5Q5HYW3 569 aaPredicted RBP11.07□□□□□ -0.64
FGD4-206ENST00000493087 DCAF8L2P0C7V8 631 aa11.06□□□□□ -0.64
FGD4-206ENST00000493087 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
FGD4-206ENST00000493087 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
FGD4-206ENST00000493087 HNRNPUL2Q1KMD3 747 aaKnown RBP11.01□□□□□ -0.65
FGD4-206ENST00000493087 WRNQ14191 1432 aaPredicted RBP eCLIP11□□□□□ -0.65
FGD4-206ENST00000493087 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
FGD4-206ENST00000493087 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
FGD4-206ENST00000493087 RB1CC1Q8TDY2 1594 aa10.95□□□□□ -0.66
FGD4-206ENST00000493087 GLIPR1L2Q4G1C9 344 aa10.94□□□□□ -0.66
FGD4-206ENST00000493087 PODXL2Q9NZ53 605 aa10.94□□□□□ -0.66
FGD4-206ENST00000493087 NACADO15069 1562 aa10.94□□□□□ -0.66
FGD4-206ENST00000493087 PLEKHG5O94827 1062 aa10.9□□□□□ -0.66
FGD4-206ENST00000493087 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
FGD4-206ENST00000493087 PAK3O75914 559 aaPredicted RBP10.88□□□□□ -0.67
FGD4-206ENST00000493087 CEP162Q5TB80 1403 aa10.85□□□□□ -0.67
FGD4-206ENST00000493087 ANP32AP39687 249 aaKnown RBP10.85□□□□□ -0.67
FGD4-206ENST00000493087 ZBTB47Q9UFB7 747 aaPredicted RBP10.85□□□□□ -0.67
FGD4-206ENST00000493087 RSPH6AQ9H0K4 717 aa10.83□□□□□ -0.68
FGD4-206ENST00000493087 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
FGD4-206ENST00000493087 PPP4R2Q9NY27 417 aa10.83□□□□□ -0.68
FGD4-206ENST00000493087 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
FGD4-206ENST00000493087 IPO9Q96P70 1041 aaKnown RBP10.81□□□□□ -0.68
FGD4-206ENST00000493087 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
FGD4-206ENST00000493087 DDX10Q13206 875 aaKnown RBP10.79□□□□□ -0.68
FGD4-206ENST00000493087 TIMELESSQ9UNS1 1208 aa10.79□□□□□ -0.68
FGD4-206ENST00000493087 USP35Q9P2H5 1018 aa10.79□□□□□ -0.68
FGD4-206ENST00000493087 ZMYND15Q9H091 742 aa10.78□□□□□ -0.68
FGD4-206ENST00000493087 WASHC2AQ641Q2 1341 aa10.78□□□□□ -0.68
FGD4-206ENST00000493087 VSIG10Q8N0Z9 540 aa10.78□□□□□ -0.68
FGD4-206ENST00000493087 ANP32CO43423 234 aa10.77□□□□□ -0.69
FGD4-206ENST00000493087 RSF1Q96T23 1441 aaPredicted RBP10.76□□□□□ -0.69
FGD4-206ENST00000493087 TNIKQ9UKE5 1360 aa10.75□□□□□ -0.69
FGD4-206ENST00000493087 NEFMP07197 916 aa10.75□□□□□ -0.69
FGD4-206ENST00000493087 DHX57Q6P158 1386 aaKnown RBP10.75□□□□□ -0.69
FGD4-206ENST00000493087 WASHC2CQ9Y4E1 1318 aa10.75□□□□□ -0.69
FGD4-206ENST00000493087 BRPF3Q9ULD4 1205 aa10.74□□□□□ -0.69
FGD4-206ENST00000493087 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms