RNA–Protein interactions for RNA: ENST00000491834.5

CRBN-210, Transcript of cereblon, humanhuman

TSL 1 (best)

Gene CRBN, Length 5,628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRBN-210ENST00000491834 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
CRBN-210ENST00000491834 NISCHQ9Y2I1 1504 aa12.62□□□□□ -0.39
CRBN-210ENST00000491834 FAM9AQ8IZU1 332 aaPredicted RBP12.36□□□□□ -0.43
CRBN-210ENST00000491834 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
CRBN-210ENST00000491834 APLP2Q06481 763 aa11.72□□□□□ -0.53
CRBN-210ENST00000491834 SHROOM4Q9ULL8 1493 aa11.55□□□□□ -0.56
CRBN-210ENST00000491834 ABCC9O60706 1549 aa11.28□□□□□ -0.6
CRBN-210ENST00000491834 MYT1LQ9UL68 1186 aa11.24□□□□□ -0.61
CRBN-210ENST00000491834 ATP1B4Q9UN42 357 aaPredicted RBP11.23□□□□□ -0.61
CRBN-210ENST00000491834 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
CRBN-210ENST00000491834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
CRBN-210ENST00000491834 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
CRBN-210ENST00000491834 UBTFP17480 764 aaKnown RBP11.1□□□□□ -0.63
CRBN-210ENST00000491834 EHMT2Q96KQ7 1210 aa11.09□□□□□ -0.63
CRBN-210ENST00000491834 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
CRBN-210ENST00000491834 RANGAP1P46060 587 aaPredicted RBP11□□□□□ -0.65
CRBN-210ENST00000491834 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.66
CRBN-210ENST00000491834 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
CRBN-210ENST00000491834 TTBK1Q5TCY1 1321 aaPredicted RBP10.92□□□□□ -0.66
CRBN-210ENST00000491834 FBLN2P98095 1184 aa10.89□□□□□ -0.67
CRBN-210ENST00000491834 ESF1Q9H501 851 aaKnown RBP10.86□□□□□ -0.67
CRBN-210ENST00000491834 CDK11AQ9UQ88 783 aaPredicted RBP10.74□□□□□ -0.69
CRBN-210ENST00000491834 RB1CC1Q8TDY2 1594 aa10.71□□□□□ -0.7
CRBN-210ENST00000491834 CHIC1Q5VXU3 224 aa10.63□□□□□ -0.71
CRBN-210ENST00000491834 BCANQ96GW7 911 aa10.61□□□□□ -0.71
CRBN-210ENST00000491834 CCDC180Q9P1Z9 1646 aa10.6□□□□□ -0.71
CRBN-210ENST00000491834 ZEB1P37275 1124 aaPredicted RBP10.59□□□□□ -0.71
CRBN-210ENST00000491834 SCRIBQ14160 1630 aa10.56□□□□□ -0.72
CRBN-210ENST00000491834 CHMP7Q8WUX9 453 aaPredicted RBP10.56□□□□□ -0.72
CRBN-210ENST00000491834 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
CRBN-210ENST00000491834 SLC4A1APQ9BWU0 796 aaKnown RBP10.54□□□□□ -0.72
CRBN-210ENST00000491834 NACADO15069 1562 aa10.53□□□□□ -0.72
CRBN-210ENST00000491834 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
CRBN-210ENST00000491834 CCER1Q8TC90 406 aaPredicted RBP10.51□□□□□ -0.73
CRBN-210ENST00000491834 PCGF6Q9BYE7 350 aa10.49□□□□□ -0.73
CRBN-210ENST00000491834 ITGAEP38570 1179 aa10.45□□□□□ -0.74
CRBN-210ENST00000491834 NEFMP07197 916 aa10.43□□□□□ -0.74
CRBN-210ENST00000491834 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
CRBN-210ENST00000491834 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
CRBN-210ENST00000491834 FAM50AQ14320 339 aaKnown RBP10.41□□□□□ -0.74
CRBN-210ENST00000491834 POLR3GLQ9BT43 218 aa10.39□□□□□ -0.75
CRBN-210ENST00000491834 NEFLP07196 543 aa10.37□□□□□ -0.75
CRBN-210ENST00000491834 ACIN1Q9UKV3 1341 aaKnown RBP10.36□□□□□ -0.75
CRBN-210ENST00000491834 ZNF777Q9ULD5 760 aaPredicted RBP10.33□□□□□ -0.76
CRBN-210ENST00000491834 ARID4BQ4LE39 1312 aaPredicted RBP10.33□□□□□ -0.76
CRBN-210ENST00000491834 TSPY4P0CV99 314 aa10.31□□□□□ -0.76
CRBN-210ENST00000491834 TSPY10P0CW01 314 aa10.31□□□□□ -0.76
CRBN-210ENST00000491834 PLPPR3Q6T4P5 718 aa10.31□□□□□ -0.76
CRBN-210ENST00000491834 CSRNP3Q8WYN3 585 aa10.3□□□□□ -0.76
CRBN-210ENST00000491834 AEBP2Q6ZN18 517 aaPredicted RBP10.3□□□□□ -0.76
CRBN-210ENST00000491834 BAZ1BQ9UIG0 1483 aaKnown RBP10.29□□□□□ -0.76
CRBN-210ENST00000491834 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
CRBN-210ENST00000491834 PLEKHD1A6NEE1 506 aa10.28□□□□□ -0.76
CRBN-210ENST00000491834 ZCCHC6Q5VYS8 1495 aaKnown RBP10.28□□□□□ -0.76
CRBN-210ENST00000491834 CENPBP07199 599 aaPredicted RBP10.27□□□□□ -0.76
CRBN-210ENST00000491834 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
CRBN-210ENST00000491834 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
CRBN-210ENST00000491834 HDGFP51858 240 aaKnown RBP10.24□□□□□ -0.77
CRBN-210ENST00000491834 C14orf37Q86TY3 774 aa10.24□□□□□ -0.77
CRBN-210ENST00000491834 PPP1R15AO75807 674 aaPredicted RBP10.24□□□□□ -0.77
CRBN-210ENST00000491834 NPM2Q86SE8 214 aaKnown RBP10.23□□□□□ -0.77
CRBN-210ENST00000491834 P3H3Q8IVL6 736 aa10.22□□□□□ -0.77
CRBN-210ENST00000491834 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
CRBN-210ENST00000491834 HAP1P54257 671 aaPredicted RBP10.2□□□□□ -0.78
CRBN-210ENST00000491834 SLC24A1O60721 1099 aa10.18□□□□□ -0.78
CRBN-210ENST00000491834 ERICH6Q7L0X2 663 aa10.17□□□□□ -0.78
CRBN-210ENST00000491834 KCNH8Q96L42 1107 aa10.15□□□□□ -0.78
CRBN-210ENST00000491834 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
CRBN-210ENST00000491834 ZNF326Q5BKZ1 582 aaKnown RBP10.14□□□□□ -0.79
CRBN-210ENST00000491834 RSF1Q96T23 1441 aaPredicted RBP10.14□□□□□ -0.79
CRBN-210ENST00000491834 DAXXQ9UER7 740 aaPredicted RBP10.13□□□□□ -0.79
CRBN-210ENST00000491834 SCAF1Q9H7N4 1312 aaKnown RBP10.12□□□□□ -0.79
CRBN-210ENST00000491834 CARMIL2Q6F5E8 1435 aa10.11□□□□□ -0.79
CRBN-210ENST00000491834 MTUS2Q5JR59 1369 aa10.11□□□□□ -0.79
CRBN-210ENST00000491834 CECR2Q9BXF3 1484 aa10.11□□□□□ -0.79
CRBN-210ENST00000491834 OSCARQ8IYS5 282 aa10.09□□□□□ -0.79
CRBN-210ENST00000491834 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
CRBN-210ENST00000491834 KIF27Q86VH2 1401 aa10.09□□□□□ -0.79
CRBN-210ENST00000491834 BAZ1AQ9NRL2 1556 aaPredicted RBP10.08□□□□□ -0.8
CRBN-210ENST00000491834 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
CRBN-210ENST00000491834 EEA1Q15075 1411 aa10.08□□□□□ -0.8
CRBN-210ENST00000491834 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
CRBN-210ENST00000491834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.05□□□□□ -0.8
CRBN-210ENST00000491834 WRNQ14191 1432 aaPredicted RBP eCLIP10.04□□□□□ -0.8
CRBN-210ENST00000491834 FOXD1Q16676 465 aa10.04□□□□□ -0.8
CRBN-210ENST00000491834 KANK1Q14678 1352 aa10.02□□□□□ -0.81
CRBN-210ENST00000491834 A0A0G2JS52 829 aa10.02□□□□□ -0.81
CRBN-210ENST00000491834 MYO15BQ96JP2 1530 aa10□□□□□ -0.81
CRBN-210ENST00000491834 CLSPNQ9HAW4 1339 aa10□□□□□ -0.81
CRBN-210ENST00000491834 CFDP1Q9UEE9 299 aaPredicted RBP10□□□□□ -0.81
CRBN-210ENST00000491834 CLIP1P30622 1438 aa9.99□□□□□ -0.81
CRBN-210ENST00000491834 NEUROD1Q13562 356 aa9.98□□□□□ -0.81
CRBN-210ENST00000491834 CNGB1Q14028 1251 aaPredicted RBP9.97□□□□□ -0.81
CRBN-210ENST00000491834 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
CRBN-210ENST00000491834 MYT1Q01538 1121 aa9.96□□□□□ -0.82
CRBN-210ENST00000491834 CDCA8Q53HL2 280 aa9.96□□□□□ -0.82
CRBN-210ENST00000491834 DCAF8L1A6NGE4 600 aa9.96□□□□□ -0.82
CRBN-210ENST00000491834 CANXP27824 592 aaKnown RBP9.95□□□□□ -0.82
CRBN-210ENST00000491834 EFCAB2Q5VUJ9 269 aa9.95□□□□□ -0.82
CRBN-210ENST00000491834 CEP164Q9UPV0 1460 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms