RNA–Protein interactions for RNA: ENST00000488832.1

CHGB-203, Transcript of chromogranin B, humanhuman

TSL 2

Gene CHGB, Length 2,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-203ENST00000488832 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
CHGB-203ENST00000488832 NISCHQ9Y2I1 1504 aa15.88■□□□□ 0.13
CHGB-203ENST00000488832 AEBP2Q6ZN18 517 aaPredicted RBP15.75■□□□□ 0.11
CHGB-203ENST00000488832 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
CHGB-203ENST00000488832 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
CHGB-203ENST00000488832 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
CHGB-203ENST00000488832 KCNA4P22459 653 aa13.64□□□□□ -0.23
CHGB-203ENST00000488832 PLPPR3Q6T4P5 718 aa13.64□□□□□ -0.23
CHGB-203ENST00000488832 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
CHGB-203ENST00000488832 CSRNP3Q8WYN3 585 aa13.51□□□□□ -0.25
CHGB-203ENST00000488832 CCDC180Q9P1Z9 1646 aa13.49□□□□□ -0.25
CHGB-203ENST00000488832 HRCP23327 699 aa13.43□□□□□ -0.26
CHGB-203ENST00000488832 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
CHGB-203ENST00000488832 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
CHGB-203ENST00000488832 SUPT5HO00267 1087 aaKnown RBP13.28□□□□□ -0.28
CHGB-203ENST00000488832 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
CHGB-203ENST00000488832 DCAF1Q9Y4B6 1507 aa13.22□□□□□ -0.29
CHGB-203ENST00000488832 ADRA2BP18089 450 aa13.19□□□□□ -0.3
CHGB-203ENST00000488832 PCGF6Q9BYE7 350 aa13.02□□□□□ -0.33
CHGB-203ENST00000488832 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
CHGB-203ENST00000488832 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
CHGB-203ENST00000488832 TRIM26Q12899 539 aaPredicted RBP12.89□□□□□ -0.35
CHGB-203ENST00000488832 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
CHGB-203ENST00000488832 ZEB1P37275 1124 aaPredicted RBP12.86□□□□□ -0.35
CHGB-203ENST00000488832 PPARGC1BQ86YN6 1023 aaKnown RBP12.85□□□□□ -0.35
CHGB-203ENST00000488832 ABCC9O60706 1549 aa12.82□□□□□ -0.36
CHGB-203ENST00000488832 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
CHGB-203ENST00000488832 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
CHGB-203ENST00000488832 ZBTB22O15209 634 aa12.72□□□□□ -0.37
CHGB-203ENST00000488832 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
CHGB-203ENST00000488832 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
CHGB-203ENST00000488832 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
CHGB-203ENST00000488832 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
CHGB-203ENST00000488832 DCAF8L2P0C7V8 631 aa12.62□□□□□ -0.39
CHGB-203ENST00000488832 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.4
CHGB-203ENST00000488832 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
CHGB-203ENST00000488832 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
CHGB-203ENST00000488832 SCAF1Q9H7N4 1312 aaKnown RBP12.47□□□□□ -0.41
CHGB-203ENST00000488832 SCRIBQ14160 1630 aa12.41□□□□□ -0.42
CHGB-203ENST00000488832 MYT1Q01538 1121 aa12.4□□□□□ -0.42
CHGB-203ENST00000488832 EIF4G1Q04637 1599 aaKnown RBP12.36□□□□□ -0.43
CHGB-203ENST00000488832 NACADO15069 1562 aa12.34□□□□□ -0.43
CHGB-203ENST00000488832 WRNQ14191 1432 aaPredicted RBP eCLIP12.33□□□□□ -0.44
CHGB-203ENST00000488832 ACIN1Q9UKV3 1341 aaKnown RBP12.33□□□□□ -0.44
CHGB-203ENST00000488832 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
CHGB-203ENST00000488832 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
CHGB-203ENST00000488832 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
CHGB-203ENST00000488832 MROH2BQ7Z745 1585 aa12.27□□□□□ -0.44
CHGB-203ENST00000488832 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
CHGB-203ENST00000488832 CENPBP07199 599 aaPredicted RBP12.22□□□□□ -0.45
CHGB-203ENST00000488832 WIZO95785 1651 aa12.21□□□□□ -0.46
CHGB-203ENST00000488832 FAM9AQ8IZU1 332 aaPredicted RBP12.2□□□□□ -0.46
CHGB-203ENST00000488832 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
CHGB-203ENST00000488832 EEA1Q15075 1411 aa12.17□□□□□ -0.46
CHGB-203ENST00000488832 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
CHGB-203ENST00000488832 DIEXFQ68CQ4 756 aaKnown RBP12.16□□□□□ -0.46
CHGB-203ENST00000488832 TNIKQ9UKE5 1360 aa12.14□□□□□ -0.47
CHGB-203ENST00000488832 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
CHGB-203ENST00000488832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
CHGB-203ENST00000488832 GTF3C3Q9Y5Q9 886 aa12.09□□□□□ -0.47
CHGB-203ENST00000488832 CEP162Q5TB80 1403 aa12.08□□□□□ -0.48
CHGB-203ENST00000488832 TAOK2Q9UL54 1235 aa12.08□□□□□ -0.48
CHGB-203ENST00000488832 FKBP8Q14318 412 aa12.06□□□□□ -0.48
CHGB-203ENST00000488832 ZNF316A6NFI3 1004 aaPredicted RBP12.04□□□□□ -0.48
CHGB-203ENST00000488832 SMARCA2P51531 1590 aa12.04□□□□□ -0.48
CHGB-203ENST00000488832 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
CHGB-203ENST00000488832 SMARCA4P51532 1647 aa12.02□□□□□ -0.49
CHGB-203ENST00000488832 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
CHGB-203ENST00000488832 ARXQ96QS3 562 aa12□□□□□ -0.49
CHGB-203ENST00000488832 TIMELESSQ9UNS1 1208 aa12□□□□□ -0.49
CHGB-203ENST00000488832 GOLGA3Q08378 1498 aa11.99□□□□□ -0.49
CHGB-203ENST00000488832 ABCC8Q09428 1581 aa11.98□□□□□ -0.49
CHGB-203ENST00000488832 CLSPNQ9HAW4 1339 aa11.97□□□□□ -0.49
CHGB-203ENST00000488832 KIF21BO75037 1637 aa11.97□□□□□ -0.49
CHGB-203ENST00000488832 APLP2Q06481 763 aa11.95□□□□□ -0.5
CHGB-203ENST00000488832 FOXD1Q16676 465 aa11.95□□□□□ -0.5
CHGB-203ENST00000488832 SOGA1O94964 1423 aa11.94□□□□□ -0.5
CHGB-203ENST00000488832 FOXD4L1Q9NU39 408 aa11.93□□□□□ -0.5
CHGB-203ENST00000488832 BCANQ96GW7 911 aa11.91□□□□□ -0.5
CHGB-203ENST00000488832 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
CHGB-203ENST00000488832 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
CHGB-203ENST00000488832 PEG3Q9GZU2 1588 aa11.91□□□□□ -0.5
CHGB-203ENST00000488832 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
CHGB-203ENST00000488832 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
CHGB-203ENST00000488832 TTBK1Q5TCY1 1321 aaPredicted RBP11.86□□□□□ -0.51
CHGB-203ENST00000488832 VPS8Q8N3P4 1428 aa11.85□□□□□ -0.51
CHGB-203ENST00000488832 RUSC2Q8N2Y8 1516 aa11.84□□□□□ -0.51
CHGB-203ENST00000488832 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
CHGB-203ENST00000488832 MIER1Q8N108 512 aa11.82□□□□□ -0.52
CHGB-203ENST00000488832 TULP1O00294 542 aaPredicted RBP11.81□□□□□ -0.52
CHGB-203ENST00000488832 CLIP1P30622 1438 aa11.8□□□□□ -0.52
CHGB-203ENST00000488832 UBTFP17480 764 aaKnown RBP11.78□□□□□ -0.52
CHGB-203ENST00000488832 SYNJ1O43426 1573 aa11.76□□□□□ -0.53
CHGB-203ENST00000488832 CUX2O14529 1486 aa11.75□□□□□ -0.53
CHGB-203ENST00000488832 ERICH3Q5RHP9 1530 aa11.73□□□□□ -0.53
CHGB-203ENST00000488832 ERICH6Q7L0X2 663 aa11.71□□□□□ -0.53
CHGB-203ENST00000488832 DHX57Q6P158 1386 aaKnown RBP11.69□□□□□ -0.54
CHGB-203ENST00000488832 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
CHGB-203ENST00000488832 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
CHGB-203ENST00000488832 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms