RNA–Protein interactions for RNA: ENST00000488352.2

DMTF1-223, Transcript of cyclin D binding myb like transcription factor 1, human

TSL 1 (best)

Gene DMTF1, Length 2,509 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMTF1-223	ENST00000488352	AEBP2	Q6ZN18	517 aa	Predicted RBP	19.96	■□□□□ 0.79
DMTF1-223	ENST00000488352	CHIC1	Q5VXU3	224 aa		19.89	■□□□□ 0.77
DMTF1-223	ENST00000488352	PHF23	Q9BUL5	403 aa	Predicted RBP	17.7	■□□□□ 0.42
DMTF1-223	ENST00000488352	SENP3	Q9H4L4	574 aa	Predicted RBP	16.63	■□□□□ 0.25
DMTF1-223	ENST00000488352	PLPPR3	Q6T4P5	718 aa		16.37	■□□□□ 0.21
DMTF1-223	ENST00000488352	ADRA2B	P18089	450 aa		15.58	■□□□□ 0.08
DMTF1-223	ENST00000488352	FOXD1	Q16676	465 aa		15.51	■□□□□ 0.07
DMTF1-223	ENST00000488352	PPP6R1	Q9UPN7	881 aa		15.49	■□□□□ 0.07
DMTF1-223	ENST00000488352	KCNA4	P22459	653 aa		15.02	■□□□□ -0
DMTF1-223	ENST00000488352	PIAS4	Q8N2W9	510 aa	Predicted RBP	14.77	□□□□□ -0.05
DMTF1-223	ENST00000488352	EHMT2	Q96KQ7	1210 aa		14.77	□□□□□ -0.05
DMTF1-223	ENST00000488352	PPP4R3CP	Q6ZMV5	832 aa		14.57	□□□□□ -0.08
DMTF1-223	ENST00000488352	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.31	□□□□□ -0.12
DMTF1-223	ENST00000488352	CSRNP3	Q8WYN3	585 aa		14.21	□□□□□ -0.13
DMTF1-223	ENST00000488352	NCBP3	Q53F19	620 aa	Known RBP	14.21	□□□□□ -0.13
DMTF1-223	ENST00000488352	NPM3	O75607	178 aa	Known RBP	14.19	□□□□□ -0.14
DMTF1-223	ENST00000488352	CNKSR2	Q8WXI2	1034 aa		13.95	□□□□□ -0.18
DMTF1-223	ENST00000488352	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.93	□□□□□ -0.18
DMTF1-223	ENST00000488352	SCAF1	Q9H7N4	1312 aa	Known RBP	13.88	□□□□□ -0.19
DMTF1-223	ENST00000488352	ZBTB22	O15209	634 aa		13.88	□□□□□ -0.19
DMTF1-223	ENST00000488352	MSH5	O43196	834 aa		13.88	□□□□□ -0.19
DMTF1-223	ENST00000488352	NISCH	Q9Y2I1	1504 aa		13.79	□□□□□ -0.2
DMTF1-223	ENST00000488352	RNF216	Q9NWF9	866 aa	Predicted RBP	13.52	□□□□□ -0.24
DMTF1-223	ENST00000488352	FOXD4L1	Q9NU39	408 aa		13.5	□□□□□ -0.25
DMTF1-223	ENST00000488352	DMRT2	Q9Y5R5	561 aa		13.39	□□□□□ -0.27
DMTF1-223	ENST00000488352	DNAJC5B	Q9UF47	199 aa		13.39	□□□□□ -0.27
DMTF1-223	ENST00000488352	HOXD11	P31277	338 aa	Predicted RBP	13.32	□□□□□ -0.28
DMTF1-223	ENST00000488352	SLC4A2	P04920	1241 aa		13.29	□□□□□ -0.28
DMTF1-223	ENST00000488352	MYCN	P04198	464 aa	Predicted RBP	12.98	□□□□□ -0.33
DMTF1-223	ENST00000488352	DCAF8L1	A6NGE4	600 aa		12.97	□□□□□ -0.33
DMTF1-223	ENST00000488352	ATXN8OS	P0DMR3	200 aa		12.83	□□□□□ -0.36
DMTF1-223	ENST00000488352	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.83	□□□□□ -0.36
DMTF1-223	ENST00000488352	FKBP8	Q14318	412 aa		12.82	□□□□□ -0.36
DMTF1-223	ENST00000488352	RTN4	Q9NQC3	1192 aa	Known RBP	12.78	□□□□□ -0.36
DMTF1-223	ENST00000488352	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	1e-9	■□□□□ 10
DMTF1-223	ENST00000488352		U3KPZ7	1027 aa	Predicted RBP	12.67	□□□□□ -0.38
DMTF1-223	ENST00000488352	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.55	□□□□□ -0.4
DMTF1-223	ENST00000488352	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.53	□□□□□ -0.4
DMTF1-223	ENST00000488352	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.49	□□□□□ -0.41
DMTF1-223	ENST00000488352	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.49	□□□□□ -0.41
DMTF1-223	ENST00000488352	SLC24A1	O60721	1099 aa		12.39	□□□□□ -0.43
DMTF1-223	ENST00000488352	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.39	□□□□□ -0.43
DMTF1-223	ENST00000488352	CCDC180	Q9P1Z9	1646 aa		12.35	□□□□□ -0.43
DMTF1-223	ENST00000488352	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.25	□□□□□ -0.45
DMTF1-223	ENST00000488352	MKRN4P	Q13434	485 aa	Predicted RBP	12.23	□□□□□ -0.45
DMTF1-223	ENST00000488352	TRH	P20396	242 aa	Predicted RBP	12.21	□□□□□ -0.45
DMTF1-223	ENST00000488352	SPDYE4	A6NLX3	237 aa		12.17	□□□□□ -0.46
DMTF1-223	ENST00000488352	APLP2	Q06481	763 aa		12.14	□□□□□ -0.47
DMTF1-223	ENST00000488352	POLA2	Q14181	598 aa		12.12	□□□□□ -0.47
DMTF1-223	ENST00000488352	CAPN15	O75808	1086 aa		12.08	□□□□□ -0.48
DMTF1-223	ENST00000488352	RNF39	Q9H2S5	420 aa		12.05	□□□□□ -0.48
DMTF1-223	ENST00000488352	ABCB7	O75027	752 aa		12	□□□□□ -0.49
DMTF1-223	ENST00000488352	FBLN2	P98095	1184 aa		12	□□□□□ -0.49
DMTF1-223	ENST00000488352	FBXO3	Q9UK99	471 aa		11.99	□□□□□ -0.49
DMTF1-223	ENST00000488352	PROM2	Q8N271	834 aa		11.96	□□□□□ -0.5
DMTF1-223	ENST00000488352	VASP	P50552	380 aa	Predicted RBP	11.95	□□□□□ -0.5
DMTF1-223	ENST00000488352	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.9	□□□□□ -0.5
DMTF1-223	ENST00000488352	C1QBP	Q07021	282 aa	Known RBP	11.85	□□□□□ -0.51
DMTF1-223	ENST00000488352	POTED	Q86YR6	584 aa		11.79	□□□□□ -0.52
DMTF1-223	ENST00000488352	DCAF8L2	P0C7V8	631 aa		11.78	□□□□□ -0.52
DMTF1-223	ENST00000488352	ABCC9	O60706	1549 aa		11.77	□□□□□ -0.52
DMTF1-223	ENST00000488352	OSCAR	Q8IYS5	282 aa		11.73	□□□□□ -0.53
DMTF1-223	ENST00000488352	MYO15B	Q96JP2	1530 aa		11.72	□□□□□ -0.53
DMTF1-223	ENST00000488352	PKD2	Q13563	968 aa		11.72	□□□□□ -0.53
DMTF1-223	ENST00000488352	DSG3	P32926	999 aa		11.71	□□□□□ -0.53
DMTF1-223	ENST00000488352	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.7	□□□□□ -0.54
DMTF1-223	ENST00000488352	ZNF692	Q9BU19	519 aa	Predicted RBP	11.68	□□□□□ -0.54
DMTF1-223	ENST00000488352	PLCB2	Q00722	1185 aa		11.67	□□□□□ -0.54
DMTF1-223	ENST00000488352	NACAD	O15069	1562 aa		11.63	□□□□□ -0.55
DMTF1-223	ENST00000488352	KLHL34	Q8N239	644 aa		11.63	□□□□□ -0.55
DMTF1-223	ENST00000488352	DCAF1	Q9Y4B6	1507 aa		11.62	□□□□□ -0.55
DMTF1-223	ENST00000488352	RB1CC1	Q8TDY2	1594 aa		11.58	□□□□□ -0.55
DMTF1-223	ENST00000488352	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
DMTF1-223	ENST00000488352	HAP1	P54257	671 aa	Predicted RBP	11.57	□□□□□ -0.56
DMTF1-223	ENST00000488352	SSUH2	Q9Y2M2	353 aa		11.54	□□□□□ -0.56
DMTF1-223	ENST00000488352	PLCD3	Q8N3E9	789 aa		11.54	□□□□□ -0.56
DMTF1-223	ENST00000488352	SPDYE2B	A6NHP3	402 aa		11.53	□□□□□ -0.56
DMTF1-223	ENST00000488352	SPDYE6	P0CI01	402 aa		11.53	□□□□□ -0.56
DMTF1-223	ENST00000488352	SPDYE2	Q495Y8	402 aa		11.53	□□□□□ -0.56
DMTF1-223	ENST00000488352	SPOCK2	Q92563	424 aa		11.53	□□□□□ -0.56
DMTF1-223	ENST00000488352	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.51	□□□□□ -0.57
DMTF1-223	ENST00000488352	ECM2	O94769	699 aa	Predicted RBP	11.5	□□□□□ -0.57
DMTF1-223	ENST00000488352	MIER1	Q8N108	512 aa		11.49	□□□□□ -0.57
DMTF1-223	ENST00000488352	NPM1	P06748	294 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
DMTF1-223	ENST00000488352	STAG3	Q9UJ98	1225 aa		11.45	□□□□□ -0.58
DMTF1-223	ENST00000488352	RGL2	O15211	777 aa		11.44	□□□□□ -0.58
DMTF1-223	ENST00000488352	SHROOM4	Q9ULL8	1493 aa		11.37	□□□□□ -0.59
DMTF1-223	ENST00000488352	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.37	□□□□□ -0.59
DMTF1-223	ENST00000488352	CACNB1	Q02641	598 aa	Predicted RBP	11.35	□□□□□ -0.59
DMTF1-223	ENST00000488352	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.35	□□□□□ -0.59
DMTF1-223	ENST00000488352	CFAP44	Q96MT7	982 aa		11.35	□□□□□ -0.59
DMTF1-223	ENST00000488352	BBX	Q8WY36	941 aa	Predicted RBP	11.3	□□□□□ -0.6
DMTF1-223	ENST00000488352	KDM2A	Q9Y2K7	1162 aa		11.3	□□□□□ -0.6
DMTF1-223	ENST00000488352	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.3	□□□□□ -0.6
DMTF1-223	ENST00000488352	CHGA	P10645	457 aa	Known RBP	11.27	□□□□□ -0.61
DMTF1-223	ENST00000488352	PRKCSH	P14314	528 aa	Predicted RBP	11.25	□□□□□ -0.61
DMTF1-223	ENST00000488352	PLEKHG5	O94827	1062 aa		11.24	□□□□□ -0.61
DMTF1-223	ENST00000488352	VSIG10	Q8N0Z9	540 aa		11.24	□□□□□ -0.61
DMTF1-223	ENST00000488352	TSHZ2	Q9NRE2	1034 aa		11.2	□□□□□ -0.62
DMTF1-223	ENST00000488352	RNF25	Q96BH1	459 aa	Predicted RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 82 ms