RNA–Protein interactions for RNA: ENST00000487727.6

HMCN2-203, Transcript of hemicentin 2, humanhuman

TSL 5

Gene HMCN2, Length 4,802 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2-203ENST00000487727 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
HMCN2-203ENST00000487727 NISCHQ9Y2I1 1504 aa23.71■■□□□ 1.39
HMCN2-203ENST00000487727 SUPT5HO00267 1087 aaKnown RBP23.34■■□□□ 1.33
HMCN2-203ENST00000487727 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
HMCN2-203ENST00000487727 EHMT2Q96KQ7 1210 aa22.56■■□□□ 1.2
HMCN2-203ENST00000487727 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
HMCN2-203ENST00000487727 PCGF6Q9BYE7 350 aa22.28■■□□□ 1.16
HMCN2-203ENST00000487727 APLP2Q06481 763 aa22.06■■□□□ 1.12
HMCN2-203ENST00000487727 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
HMCN2-203ENST00000487727 CENPBP07199 599 aaPredicted RBP21.92■■□□□ 1.1
HMCN2-203ENST00000487727 TTBK1Q5TCY1 1321 aaPredicted RBP21.88■■□□□ 1.09
HMCN2-203ENST00000487727 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
HMCN2-203ENST00000487727 CCER1Q8TC90 406 aaPredicted RBP21.7■■□□□ 1.06
HMCN2-203ENST00000487727 ERICH6Q7L0X2 663 aa21.63■■□□□ 1.05
HMCN2-203ENST00000487727 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
HMCN2-203ENST00000487727 MYT1Q01538 1121 aa21.51■■□□□ 1.03
HMCN2-203ENST00000487727 RANGAP1P46060 587 aaPredicted RBP21.42■■□□□ 1.02
HMCN2-203ENST00000487727 YTHDC1Q96MU7 727 aaKnown RBP21.4■■□□□ 1.02
HMCN2-203ENST00000487727 HRCP23327 699 aa21.33■■□□□ 1.01
HMCN2-203ENST00000487727 NEFLP07196 543 aa21.29■■□□□ 1
HMCN2-203ENST00000487727 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
HMCN2-203ENST00000487727 TRIM26Q12899 539 aaPredicted RBP21.21■□□□□ 0.99
HMCN2-203ENST00000487727 LOC105371045A0A1W2PR82 267 aa21.18■□□□□ 0.98
HMCN2-203ENST00000487727 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
HMCN2-203ENST00000487727 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
HMCN2-203ENST00000487727 ATP1B4Q9UN42 357 aaPredicted RBP21.13■□□□□ 0.97
HMCN2-203ENST00000487727 ITGAEP38570 1179 aa20.66■□□□□ 0.9
HMCN2-203ENST00000487727 HNRNPUL2Q1KMD3 747 aaKnown RBP20.66■□□□□ 0.9
HMCN2-203ENST00000487727 DIEXFQ68CQ4 756 aaKnown RBP20.62■□□□□ 0.89
HMCN2-203ENST00000487727 DAXXQ9UER7 740 aaPredicted RBP20.61■□□□□ 0.89
HMCN2-203ENST00000487727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
HMCN2-203ENST00000487727 POLR3GLQ9BT43 218 aa20.51■□□□□ 0.87
HMCN2-203ENST00000487727 CNGB1Q14028 1251 aaPredicted RBP20.41■□□□□ 0.86
HMCN2-203ENST00000487727 GTF3C3Q9Y5Q9 886 aa20.4■□□□□ 0.86
HMCN2-203ENST00000487727 RTL5Q5HYW3 569 aaPredicted RBP20.33■□□□□ 0.85
HMCN2-203ENST00000487727 BCANQ96GW7 911 aa20.2■□□□□ 0.82
HMCN2-203ENST00000487727 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
HMCN2-203ENST00000487727 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
HMCN2-203ENST00000487727 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
HMCN2-203ENST00000487727 MYT1LQ9UL68 1186 aa20.09■□□□□ 0.81
HMCN2-203ENST00000487727 FAM50AQ14320 339 aaKnown RBP20.04■□□□□ 0.8
HMCN2-203ENST00000487727 NEUROD1Q13562 356 aa20.04■□□□□ 0.8
HMCN2-203ENST00000487727 CDK11AQ9UQ88 783 aaPredicted RBP20.01■□□□□ 0.79
HMCN2-203ENST00000487727 ANP32CO43423 234 aa19.98■□□□□ 0.79
HMCN2-203ENST00000487727 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
HMCN2-203ENST00000487727 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
HMCN2-203ENST00000487727 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
HMCN2-203ENST00000487727 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
HMCN2-203ENST00000487727 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
HMCN2-203ENST00000487727 ABCC9O60706 1549 aa19.76■□□□□ 0.75
HMCN2-203ENST00000487727 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
HMCN2-203ENST00000487727 ZNF326Q5BKZ1 582 aaKnown RBP19.74■□□□□ 0.75
HMCN2-203ENST00000487727 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
HMCN2-203ENST00000487727 ANP32AP39687 249 aaKnown RBP19.67■□□□□ 0.74
HMCN2-203ENST00000487727 FKBP8Q14318 412 aa19.64■□□□□ 0.73
HMCN2-203ENST00000487727 CSRNP3Q8WYN3 585 aa19.62■□□□□ 0.73
HMCN2-203ENST00000487727 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
HMCN2-203ENST00000487727 ZBTB47Q9UFB7 747 aaPredicted RBP19.54■□□□□ 0.72
HMCN2-203ENST00000487727 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
HMCN2-203ENST00000487727 EIF5BO60841 1220 aaKnown RBP19.49■□□□□ 0.71
HMCN2-203ENST00000487727 HNRNPUQ00839 825 aaKnown RBP eCLIP19.46■□□□□ 0.71
HMCN2-203ENST00000487727 DDX10Q13206 875 aaKnown RBP19.45■□□□□ 0.7
HMCN2-203ENST00000487727 BCL11AQ9H165 835 aa19.45■□□□□ 0.7
HMCN2-203ENST00000487727 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
HMCN2-203ENST00000487727 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
HMCN2-203ENST00000487727 MIER1Q8N108 512 aa19.39■□□□□ 0.7
HMCN2-203ENST00000487727 FAM9BQ8IZU0 186 aa19.34■□□□□ 0.69
HMCN2-203ENST00000487727 TONSLQ96HA7 1378 aa19.34■□□□□ 0.69
HMCN2-203ENST00000487727 ARID3CA6NKF2 412 aa19.31■□□□□ 0.68
HMCN2-203ENST00000487727 NBR1Q14596 966 aa19.29■□□□□ 0.68
HMCN2-203ENST00000487727 NEFMP07197 916 aa19.28■□□□□ 0.68
HMCN2-203ENST00000487727 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.68
HMCN2-203ENST00000487727 ANP32BQ92688 251 aaKnown RBP19.23■□□□□ 0.67
HMCN2-203ENST00000487727 FBLN2P98095 1184 aa19.23■□□□□ 0.67
HMCN2-203ENST00000487727 RSF1Q96T23 1441 aaPredicted RBP19.23■□□□□ 0.67
HMCN2-203ENST00000487727 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
HMCN2-203ENST00000487727 ZNF777Q9ULD5 760 aaPredicted RBP19.21■□□□□ 0.67
HMCN2-203ENST00000487727 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
HMCN2-203ENST00000487727 HSP90AA1P07900 732 aaKnown RBP19.2■□□□□ 0.66
HMCN2-203ENST00000487727 UPF2Q9HAU5 1272 aaKnown RBP19.2■□□□□ 0.66
HMCN2-203ENST00000487727 CCDC180Q9P1Z9 1646 aa19.19■□□□□ 0.66
HMCN2-203ENST00000487727 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
HMCN2-203ENST00000487727 TMC1Q8TDI8 760 aa19.16■□□□□ 0.66
HMCN2-203ENST00000487727 MRS2Q9HD23 443 aa19.14■□□□□ 0.65
HMCN2-203ENST00000487727 GLIPR1L2Q4G1C9 344 aa19.13■□□□□ 0.65
HMCN2-203ENST00000487727 HIRIP3Q9BW71 556 aaPredicted RBP19.11■□□□□ 0.65
HMCN2-203ENST00000487727 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
HMCN2-203ENST00000487727 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.05■□□□□ 0.64
HMCN2-203ENST00000487727 ARXQ96QS3 562 aa19.05■□□□□ 0.64
HMCN2-203ENST00000487727 ANP32EQ9BTT0 268 aa19.03■□□□□ 0.64
HMCN2-203ENST00000487727 CHIC2Q9UKJ5 165 aa19.03■□□□□ 0.64
HMCN2-203ENST00000487727 CLIP1P30622 1438 aa19.01■□□□□ 0.63
HMCN2-203ENST00000487727 WDR43Q15061 677 aaKnown RBP eCLIP18.93■□□□□ 0.62
HMCN2-203ENST00000487727 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
HMCN2-203ENST00000487727 CHGAP10645 457 aaKnown RBP18.91■□□□□ 0.62
HMCN2-203ENST00000487727 KDM2AQ9Y2K7 1162 aa18.89■□□□□ 0.61
HMCN2-203ENST00000487727 SUPT16HQ9Y5B9 1047 aaKnown RBP18.88■□□□□ 0.61
HMCN2-203ENST00000487727 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
HMCN2-203ENST00000487727 GOLGA3Q08378 1498 aa18.83■□□□□ 0.61
HMCN2-203ENST00000487727 DDRGK1Q96HY6 314 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms