RNA–Protein interactions for RNA: ENST00000479788.5

DUSP28-204, Transcript of dual specificity phosphatase 28, humanhuman

TSL 3

Gene DUSP28, Length 450 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-204ENST00000479788 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
DUSP28-204ENST00000479788 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
DUSP28-204ENST00000479788 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
DUSP28-204ENST00000479788 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
DUSP28-204ENST00000479788 FOXD1Q16676 465 aa17.49■□□□□ 0.39
DUSP28-204ENST00000479788 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
DUSP28-204ENST00000479788 MSH5O43196 834 aa16.57■□□□□ 0.24
DUSP28-204ENST00000479788 PIAS4Q8N2W9 510 aaPredicted RBP16.24■□□□□ 0.19
DUSP28-204ENST00000479788 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
DUSP28-204ENST00000479788 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
DUSP28-204ENST00000479788 ADRA2BP18089 450 aa15.97■□□□□ 0.15
DUSP28-204ENST00000479788 DMRT2Q9Y5R5 561 aa14.83□□□□□ -0.04
DUSP28-204ENST00000479788 MAPK8IP2Q13387 824 aaPredicted RBP14.76□□□□□ -0.05
DUSP28-204ENST00000479788 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
DUSP28-204ENST00000479788 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
DUSP28-204ENST00000479788 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
DUSP28-204ENST00000479788 PPP4R3CPQ6ZMV5 832 aa14.14□□□□□ -0.15
DUSP28-204ENST00000479788 DCAF8L1A6NGE4 600 aa14.12□□□□□ -0.15
DUSP28-204ENST00000479788 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
DUSP28-204ENST00000479788 NISCHQ9Y2I1 1504 aa14.05□□□□□ -0.16
DUSP28-204ENST00000479788 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
DUSP28-204ENST00000479788 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
DUSP28-204ENST00000479788 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
DUSP28-204ENST00000479788 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
DUSP28-204ENST00000479788 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
DUSP28-204ENST00000479788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
DUSP28-204ENST00000479788 NPM3O75607 178 aaKnown RBP13.28□□□□□ -0.28
DUSP28-204ENST00000479788 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
DUSP28-204ENST00000479788 DSG3P32926 999 aa13.05□□□□□ -0.32
DUSP28-204ENST00000479788 POTEHQ6S545 545 aa13.01□□□□□ -0.33
DUSP28-204ENST00000479788 CAPN15O75808 1086 aa13□□□□□ -0.33
DUSP28-204ENST00000479788 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
DUSP28-204ENST00000479788 APLP2Q06481 763 aa12.82□□□□□ -0.36
DUSP28-204ENST00000479788 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
DUSP28-204ENST00000479788 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
DUSP28-204ENST00000479788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
DUSP28-204ENST00000479788 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
DUSP28-204ENST00000479788 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
DUSP28-204ENST00000479788 KCNA4P22459 653 aa12.69□□□□□ -0.38
DUSP28-204ENST00000479788 ABCB7O75027 752 aa12.61□□□□□ -0.39
DUSP28-204ENST00000479788 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
DUSP28-204ENST00000479788 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
DUSP28-204ENST00000479788 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
DUSP28-204ENST00000479788 ABCC9O60706 1549 aa12.45□□□□□ -0.42
DUSP28-204ENST00000479788 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
DUSP28-204ENST00000479788 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
DUSP28-204ENST00000479788 POLA2Q14181 598 aa12.31□□□□□ -0.44
DUSP28-204ENST00000479788 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
DUSP28-204ENST00000479788 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
DUSP28-204ENST00000479788 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
DUSP28-204ENST00000479788 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
DUSP28-204ENST00000479788 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
DUSP28-204ENST00000479788 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
DUSP28-204ENST00000479788 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
DUSP28-204ENST00000479788 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
DUSP28-204ENST00000479788 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
DUSP28-204ENST00000479788 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
DUSP28-204ENST00000479788 OSCARQ8IYS5 282 aa11.89□□□□□ -0.51
DUSP28-204ENST00000479788 FXR2P51116 673 aaKnown RBP eCLIP11.86□□□□□ -0.51
DUSP28-204ENST00000479788 NACADO15069 1562 aa11.84□□□□□ -0.51
DUSP28-204ENST00000479788 PITPNM1O00562 1244 aa11.83□□□□□ -0.52
DUSP28-204ENST00000479788 HAX1O00165 279 aa11.81□□□□□ -0.52
DUSP28-204ENST00000479788 ATXN8OSP0DMR3 200 aa11.76□□□□□ -0.53
DUSP28-204ENST00000479788 UNC13AQ9UPW8 1703 aa11.71□□□□□ -0.54
DUSP28-204ENST00000479788 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
DUSP28-204ENST00000479788 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
DUSP28-204ENST00000479788 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
DUSP28-204ENST00000479788 MYO15BQ96JP2 1530 aa11.68□□□□□ -0.54
DUSP28-204ENST00000479788 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
DUSP28-204ENST00000479788 ZBTB22O15209 634 aa11.63□□□□□ -0.55
DUSP28-204ENST00000479788 FBLN2P98095 1184 aa11.63□□□□□ -0.55
DUSP28-204ENST00000479788 EVX2Q03828 476 aa11.61□□□□□ -0.55
DUSP28-204ENST00000479788 PABPN1Q86U42 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
DUSP28-204ENST00000479788 DCAF1Q9Y4B6 1507 aa11.59□□□□□ -0.55
DUSP28-204ENST00000479788 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
DUSP28-204ENST00000479788 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
DUSP28-204ENST00000479788 BICRAQ9NZM4 1560 aa11.52□□□□□ -0.57
DUSP28-204ENST00000479788 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
DUSP28-204ENST00000479788 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
DUSP28-204ENST00000479788 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
DUSP28-204ENST00000479788 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.57
DUSP28-204ENST00000479788 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
DUSP28-204ENST00000479788 ZNF692Q9BU19 519 aaPredicted RBP11.45□□□□□ -0.58
DUSP28-204ENST00000479788 GABBR2O75899 941 aa11.37□□□□□ -0.59
DUSP28-204ENST00000479788 SHROOM4Q9ULL8 1493 aa11.37□□□□□ -0.59
DUSP28-204ENST00000479788 EHMT2Q96KQ7 1210 aa11.33□□□□□ -0.6
DUSP28-204ENST00000479788 PRR29P0C7W0 189 aa11.29□□□□□ -0.6
DUSP28-204ENST00000479788 LHX8Q68G74 356 aa11.29□□□□□ -0.6
DUSP28-204ENST00000479788 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
DUSP28-204ENST00000479788 CC2D2AQ9P2K1 1620 aa11.26□□□□□ -0.61
DUSP28-204ENST00000479788 EIF4G1Q04637 1599 aaKnown RBP11.25□□□□□ -0.61
DUSP28-204ENST00000479788 CLCN6P51797 869 aa11.25□□□□□ -0.61
DUSP28-204ENST00000479788 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
DUSP28-204ENST00000479788 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
DUSP28-204ENST00000479788 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
DUSP28-204ENST00000479788 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
DUSP28-204ENST00000479788 POTEIP0CG38 1075 aa11.11□□□□□ -0.63
DUSP28-204ENST00000479788 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
DUSP28-204ENST00000479788 DCBLD2Q96PD2 775 aa10.99□□□□□ -0.65
DUSP28-204ENST00000479788 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms