RNA–Protein interactions for RNA: ENST00000479210.1

GLI3-206, Transcript of GLI family zinc finger 3, humanhuman

TSL 2

Gene GLI3, Length 4,968 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-206ENST00000479210 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
GLI3-206ENST00000479210 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
GLI3-206ENST00000479210 NISCHQ9Y2I1 1504 aa23.83■■□□□ 1.4
GLI3-206ENST00000479210 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
GLI3-206ENST00000479210 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.28
GLI3-206ENST00000479210 APLP2Q06481 763 aa22.55■■□□□ 1.2
GLI3-206ENST00000479210 FAM9AQ8IZU1 332 aaPredicted RBP22.52■■□□□ 1.2
GLI3-206ENST00000479210 PELP1Q8IZL8 1130 aaKnown RBP22.39■■□□□ 1.17
GLI3-206ENST00000479210 PCGF6Q9BYE7 350 aa22.35■■□□□ 1.17
GLI3-206ENST00000479210 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
GLI3-206ENST00000479210 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
GLI3-206ENST00000479210 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
GLI3-206ENST00000479210 CCER1Q8TC90 406 aaPredicted RBP21.88■■□□□ 1.09
GLI3-206ENST00000479210 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
GLI3-206ENST00000479210 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
GLI3-206ENST00000479210 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
GLI3-206ENST00000479210 ATP1B4Q9UN42 357 aaPredicted RBP21.78■■□□□ 1.08
GLI3-206ENST00000479210 PPARGC1BQ86YN6 1023 aaKnown RBP21.53■■□□□ 1.04
GLI3-206ENST00000479210 ERICH6Q7L0X2 663 aa21.47■■□□□ 1.03
GLI3-206ENST00000479210 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
GLI3-206ENST00000479210 TRIM26Q12899 539 aaPredicted RBP21.35■■□□□ 1.01
GLI3-206ENST00000479210 NEFLP07196 543 aa21.3■■□□□ 1
GLI3-206ENST00000479210 LOC105371045A0A1W2PR82 267 aa21.24■□□□□ 0.99
GLI3-206ENST00000479210 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.99
GLI3-206ENST00000479210 MYT1Q01538 1121 aa21.2■□□□□ 0.98
GLI3-206ENST00000479210 HRCP23327 699 aa21.16■□□□□ 0.98
GLI3-206ENST00000479210 ITGAEP38570 1179 aa21.13■□□□□ 0.97
GLI3-206ENST00000479210 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
GLI3-206ENST00000479210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
GLI3-206ENST00000479210 POLR3GLQ9BT43 218 aa20.9■□□□□ 0.94
GLI3-206ENST00000479210 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
GLI3-206ENST00000479210 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
GLI3-206ENST00000479210 DIEXFQ68CQ4 756 aaKnown RBP20.62■□□□□ 0.89
GLI3-206ENST00000479210 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
GLI3-206ENST00000479210 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.89
GLI3-206ENST00000479210 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
GLI3-206ENST00000479210 ABCC9O60706 1549 aa20.52■□□□□ 0.88
GLI3-206ENST00000479210 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
GLI3-206ENST00000479210 TRIM52Q96A61 297 aa20.43■□□□□ 0.86
GLI3-206ENST00000479210 NEUROD1Q13562 356 aa20.41■□□□□ 0.86
GLI3-206ENST00000479210 CLSPNQ9HAW4 1339 aa20.26■□□□□ 0.83
GLI3-206ENST00000479210 ZNF326Q5BKZ1 582 aaKnown RBP20.21■□□□□ 0.83
GLI3-206ENST00000479210 GTF3C3Q9Y5Q9 886 aa20.19■□□□□ 0.82
GLI3-206ENST00000479210 BCANQ96GW7 911 aa20.18■□□□□ 0.82
GLI3-206ENST00000479210 ANP32CO43423 234 aa20.17■□□□□ 0.82
GLI3-206ENST00000479210 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
GLI3-206ENST00000479210 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
GLI3-206ENST00000479210 ZNF316A6NFI3 1004 aaPredicted RBP20.15■□□□□ 0.82
GLI3-206ENST00000479210 FBLN2P98095 1184 aa20.14■□□□□ 0.82
GLI3-206ENST00000479210 P3H3Q8IVL6 736 aa20.11■□□□□ 0.81
GLI3-206ENST00000479210 ARID3CA6NKF2 412 aa20.03■□□□□ 0.8
GLI3-206ENST00000479210 CDK11AQ9UQ88 783 aaPredicted RBP19.95■□□□□ 0.78
GLI3-206ENST00000479210 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.78
GLI3-206ENST00000479210 ZNF777Q9ULD5 760 aaPredicted RBP19.88■□□□□ 0.77
GLI3-206ENST00000479210 ZBTB47Q9UFB7 747 aaPredicted RBP19.82■□□□□ 0.76
GLI3-206ENST00000479210 CANXP27824 592 aaKnown RBP19.79■□□□□ 0.76
GLI3-206ENST00000479210 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
GLI3-206ENST00000479210 BCL11AQ9H165 835 aa19.75■□□□□ 0.75
GLI3-206ENST00000479210 NEFMP07197 916 aa19.71■□□□□ 0.75
GLI3-206ENST00000479210 SLC24A1O60721 1099 aa19.71■□□□□ 0.75
GLI3-206ENST00000479210 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
GLI3-206ENST00000479210 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
GLI3-206ENST00000479210 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
GLI3-206ENST00000479210 DDX10Q13206 875 aaKnown RBP19.65■□□□□ 0.74
GLI3-206ENST00000479210 FKBP8Q14318 412 aa19.62■□□□□ 0.73
GLI3-206ENST00000479210 ANP32AP39687 249 aaKnown RBP19.61■□□□□ 0.73
GLI3-206ENST00000479210 HNRNPUQ00839 825 aaKnown RBP eCLIP19.6■□□□□ 0.73
GLI3-206ENST00000479210 CHIC2Q9UKJ5 165 aa19.58■□□□□ 0.72
GLI3-206ENST00000479210 SCAF1Q9H7N4 1312 aaKnown RBP19.57■□□□□ 0.72
GLI3-206ENST00000479210 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
GLI3-206ENST00000479210 FAM9BQ8IZU0 186 aa19.56■□□□□ 0.72
GLI3-206ENST00000479210 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
GLI3-206ENST00000479210 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
GLI3-206ENST00000479210 ESF1Q9H501 851 aaKnown RBP19.47■□□□□ 0.71
GLI3-206ENST00000479210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.7
GLI3-206ENST00000479210 STAG3Q9UJ98 1225 aa19.44■□□□□ 0.7
GLI3-206ENST00000479210 TMC1Q8TDI8 760 aa19.43■□□□□ 0.7
GLI3-206ENST00000479210 MTUS2Q5JR59 1369 aa19.41■□□□□ 0.7
GLI3-206ENST00000479210 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
GLI3-206ENST00000479210 TSPY4P0CV99 314 aa19.4■□□□□ 0.7
GLI3-206ENST00000479210 TSPY10P0CW01 314 aa19.4■□□□□ 0.7
GLI3-206ENST00000479210 CLIP1P30622 1438 aa19.4■□□□□ 0.7
GLI3-206ENST00000479210 KDM2AQ9Y2K7 1162 aa19.38■□□□□ 0.69
GLI3-206ENST00000479210 MIER1Q8N108 512 aa19.38■□□□□ 0.69
GLI3-206ENST00000479210 HIRIP3Q9BW71 556 aaPredicted RBP19.37■□□□□ 0.69
GLI3-206ENST00000479210 MRS2Q9HD23 443 aa19.36■□□□□ 0.69
GLI3-206ENST00000479210 CCDC136Q96JN2 1154 aa19.34■□□□□ 0.69
GLI3-206ENST00000479210 PLPPR3Q6T4P5 718 aa19.31■□□□□ 0.68
GLI3-206ENST00000479210 HSP90AA1P07900 732 aaKnown RBP19.3■□□□□ 0.68
GLI3-206ENST00000479210 UPF2Q9HAU5 1272 aaKnown RBP19.3■□□□□ 0.68
GLI3-206ENST00000479210 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
GLI3-206ENST00000479210 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
GLI3-206ENST00000479210 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.67
GLI3-206ENST00000479210 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
GLI3-206ENST00000479210 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
GLI3-206ENST00000479210 EIF4G2P78344 907 aaKnown RBP eCLIP19.25■□□□□ 0.67
GLI3-206ENST00000479210 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.24■□□□□ 0.67
GLI3-206ENST00000479210 IRX6P78412 446 aaPredicted RBP19.23■□□□□ 0.67
GLI3-206ENST00000479210 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
GLI3-206ENST00000479210 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms