RNA–Protein interactions for RNA: ENST00000479097.5

RARB-206, Transcript of retinoic acid receptor beta, humanhuman

TSL 3

Gene RARB, Length 1,235 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-206ENST00000479097 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
RARB-206ENST00000479097 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
RARB-206ENST00000479097 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
RARB-206ENST00000479097 SENP3Q9H4L4 574 aaPredicted RBP16.19■□□□□ 0.18
RARB-206ENST00000479097 FOXD1Q16676 465 aa15.03■□□□□ -0
RARB-206ENST00000479097 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
RARB-206ENST00000479097 PPP6R1Q9UPN7 881 aa14.41□□□□□ -0.1
RARB-206ENST00000479097 ADRA2BP18089 450 aa14.33□□□□□ -0.12
RARB-206ENST00000479097 PIAS4Q8N2W9 510 aaPredicted RBP14.07□□□□□ -0.16
RARB-206ENST00000479097 MSH5O43196 834 aa13.9□□□□□ -0.18
RARB-206ENST00000479097 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
RARB-206ENST00000479097 NISCHQ9Y2I1 1504 aa13.16□□□□□ -0.3
RARB-206ENST00000479097 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
RARB-206ENST00000479097 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
RARB-206ENST00000479097 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
RARB-206ENST00000479097 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
RARB-206ENST00000479097 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
RARB-206ENST00000479097 KCNA4P22459 653 aa12.8□□□□□ -0.36
RARB-206ENST00000479097 POTEDQ86YR6 584 aa12.75□□□□□ -0.37
RARB-206ENST00000479097 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
RARB-206ENST00000479097 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
RARB-206ENST00000479097 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
RARB-206ENST00000479097 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
RARB-206ENST00000479097 SLC4A1APQ9BWU0 796 aaKnown RBP12.16□□□□□ -0.46
RARB-206ENST00000479097 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
RARB-206ENST00000479097 SLC4A2P04920 1241 aa12.02□□□□□ -0.49
RARB-206ENST00000479097 RNF39Q9H2S5 420 aa11.93□□□□□ -0.5
RARB-206ENST00000479097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.92□□□□□ -0.5
RARB-206ENST00000479097 CCDC180Q9P1Z9 1646 aa11.87□□□□□ -0.51
RARB-206ENST00000479097 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
RARB-206ENST00000479097 ABCC9O60706 1549 aa11.81□□□□□ -0.52
RARB-206ENST00000479097 ZBTB22O15209 634 aa11.81□□□□□ -0.52
RARB-206ENST00000479097 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
RARB-206ENST00000479097 C1QBPQ07021 282 aaKnown RBP11.79□□□□□ -0.52
RARB-206ENST00000479097 MYCNP04198 464 aaPredicted RBP11.7□□□□□ -0.54
RARB-206ENST00000479097 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
RARB-206ENST00000479097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
RARB-206ENST00000479097 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
RARB-206ENST00000479097 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
RARB-206ENST00000479097 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
RARB-206ENST00000479097 CACNB1Q02641 598 aaPredicted RBP11.54□□□□□ -0.56
RARB-206ENST00000479097 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
RARB-206ENST00000479097 APLP2Q06481 763 aa11.52□□□□□ -0.57
RARB-206ENST00000479097 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
RARB-206ENST00000479097 ATF5Q9Y2D1 282 aaPredicted RBP11.38□□□□□ -0.59
RARB-206ENST00000479097 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
RARB-206ENST00000479097 CAPN15O75808 1086 aa11.34□□□□□ -0.59
RARB-206ENST00000479097 RB1CC1Q8TDY2 1594 aa11.32□□□□□ -0.6
RARB-206ENST00000479097 DSG3P32926 999 aa11.3□□□□□ -0.6
RARB-206ENST00000479097 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
RARB-206ENST00000479097 NACADO15069 1562 aa11.24□□□□□ -0.61
RARB-206ENST00000479097 DCAF8L2P0C7V8 631 aa11.19□□□□□ -0.62
RARB-206ENST00000479097 POLA2Q14181 598 aa11.14□□□□□ -0.63
RARB-206ENST00000479097 MYO15BQ96JP2 1530 aa11.11□□□□□ -0.63
RARB-206ENST00000479097 ABCB7O75027 752 aa11.1□□□□□ -0.63
RARB-206ENST00000479097 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
RARB-206ENST00000479097 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
RARB-206ENST00000479097 UNC13AQ9UPW8 1703 aa10.98□□□□□ -0.65
RARB-206ENST00000479097 DCAF1Q9Y4B6 1507 aa10.94□□□□□ -0.66
RARB-206ENST00000479097 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
RARB-206ENST00000479097 BICRAQ9NZM4 1560 aa10.91□□□□□ -0.66
RARB-206ENST00000479097 SHROOM4Q9ULL8 1493 aa10.91□□□□□ -0.66
RARB-206ENST00000479097 ZCCHC6Q5VYS8 1495 aaKnown RBP10.9□□□□□ -0.66
RARB-206ENST00000479097 FBLN2P98095 1184 aa10.86□□□□□ -0.67
RARB-206ENST00000479097 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
RARB-206ENST00000479097 OSCARQ8IYS5 282 aa10.74□□□□□ -0.69
RARB-206ENST00000479097 SCRIBQ14160 1630 aa10.73□□□□□ -0.69
RARB-206ENST00000479097 SPDYE2BA6NHP3 402 aa10.71□□□□□ -0.69
RARB-206ENST00000479097 SPDYE6P0CI01 402 aa10.71□□□□□ -0.69
RARB-206ENST00000479097 SPDYE2Q495Y8 402 aa10.71□□□□□ -0.69
RARB-206ENST00000479097 CC2D2AQ9P2K1 1620 aa10.69□□□□□ -0.7
RARB-206ENST00000479097 CECR2Q9BXF3 1484 aa10.69□□□□□ -0.7
RARB-206ENST00000479097 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
RARB-206ENST00000479097 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
RARB-206ENST00000479097 AKT1S1Q96B36 256 aa10.63□□□□□ -0.71
RARB-206ENST00000479097 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
RARB-206ENST00000479097 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
RARB-206ENST00000479097 PROM2Q8N271 834 aa10.57□□□□□ -0.72
RARB-206ENST00000479097 REM2Q8IYK8 340 aaPredicted RBP10.5□□□□□ -0.73
RARB-206ENST00000479097 FKBP8Q14318 412 aa10.47□□□□□ -0.73
RARB-206ENST00000479097 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
RARB-206ENST00000479097 NCAPD3P42695 1498 aa10.36□□□□□ -0.75
RARB-206ENST00000479097 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
RARB-206ENST00000479097 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
RARB-206ENST00000479097 SMARCA2P51531 1590 aa10.31□□□□□ -0.76
RARB-206ENST00000479097 CHRDL2Q6WN34 429 aa10.31□□□□□ -0.76
RARB-206ENST00000479097 DNAJC5Q9H3Z4 198 aa10.3□□□□□ -0.76
RARB-206ENST00000479097 CUX2O14529 1486 aa10.3□□□□□ -0.76
RARB-206ENST00000479097 ATAD2BQ9ULI0 1458 aa10.3□□□□□ -0.76
RARB-206ENST00000479097 HMGXB3Q12766 1538 aa10.28□□□□□ -0.76
RARB-206ENST00000479097 SMARCA4P51532 1647 aa10.26□□□□□ -0.77
RARB-206ENST00000479097 ERCC6Q03468 1493 aa10.26□□□□□ -0.77
RARB-206ENST00000479097 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.77
RARB-206ENST00000479097 BAZ1AQ9NRL2 1556 aaPredicted RBP10.25□□□□□ -0.77
RARB-206ENST00000479097 CLEC11AQ9Y240 323 aa10.21□□□□□ -0.77
RARB-206ENST00000479097 BAZ1BQ9UIG0 1483 aaKnown RBP10.21□□□□□ -0.78
RARB-206ENST00000479097 PEG3Q9GZU2 1588 aa10.21□□□□□ -0.78
RARB-206ENST00000479097 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
RARB-206ENST00000479097 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
RARB-206ENST00000479097 PIP4P2Q8N4L2 257 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms