RNA–Protein interactions for RNA: ENST00000476672.1

FXR1-212, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-212ENST00000476672 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
FXR1-212ENST00000476672 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
FXR1-212ENST00000476672 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
FXR1-212ENST00000476672 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
FXR1-212ENST00000476672 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
FXR1-212ENST00000476672 FOXD1Q16676 465 aa18.68■□□□□ 0.58
FXR1-212ENST00000476672 MSH5O43196 834 aa17.88■□□□□ 0.45
FXR1-212ENST00000476672 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
FXR1-212ENST00000476672 PPP6R1Q9UPN7 881 aa16.64■□□□□ 0.25
FXR1-212ENST00000476672 ADRA2BP18089 450 aa16.49■□□□□ 0.23
FXR1-212ENST00000476672 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
FXR1-212ENST00000476672 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
FXR1-212ENST00000476672 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
FXR1-212ENST00000476672 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
FXR1-212ENST00000476672 MAPK8IP2Q13387 824 aaPredicted RBP15.49■□□□□ 0.07
FXR1-212ENST00000476672 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
FXR1-212ENST00000476672 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
FXR1-212ENST00000476672 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
FXR1-212ENST00000476672 POTEHQ6S545 545 aa14.94□□□□□ -0.02
FXR1-212ENST00000476672 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
FXR1-212ENST00000476672 HOXD11P31277 338 aaPredicted RBP14.6□□□□□ -0.07
FXR1-212ENST00000476672 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
FXR1-212ENST00000476672 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
FXR1-212ENST00000476672 CCDC180Q9P1Z9 1646 aa14.08□□□□□ -0.16
FXR1-212ENST00000476672 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
FXR1-212ENST00000476672 CNKSR2Q8WXI2 1034 aa14.01□□□□□ -0.17
FXR1-212ENST00000476672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.196e-6■□□□□ 8.3
FXR1-212ENST00000476672 DSG3P32926 999 aa13.84□□□□□ -0.19
FXR1-212ENST00000476672 ZCCHC6Q5VYS8 1495 aaKnown RBP13.65□□□□□ -0.22
FXR1-212ENST00000476672 CAPN15O75808 1086 aa13.61□□□□□ -0.23
FXR1-212ENST00000476672 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
FXR1-212ENST00000476672 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
FXR1-212ENST00000476672 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
FXR1-212ENST00000476672 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.25
FXR1-212ENST00000476672 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
FXR1-212ENST00000476672 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
FXR1-212ENST00000476672 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
FXR1-212ENST00000476672 SHROOM4Q9ULL8 1493 aa13.26□□□□□ -0.29
FXR1-212ENST00000476672 ABCC9O60706 1549 aa13.22□□□□□ -0.29
FXR1-212ENST00000476672 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
FXR1-212ENST00000476672 ABCB7O75027 752 aa13.19□□□□□ -0.3
FXR1-212ENST00000476672 NACADO15069 1562 aa13.13□□□□□ -0.31
FXR1-212ENST00000476672 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
FXR1-212ENST00000476672 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
FXR1-212ENST00000476672 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
FXR1-212ENST00000476672 RB1CC1Q8TDY2 1594 aa12.97□□□□□ -0.33
FXR1-212ENST00000476672 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
FXR1-212ENST00000476672 APLP2Q06481 763 aa12.94□□□□□ -0.34
FXR1-212ENST00000476672 SCRIBQ14160 1630 aa12.92□□□□□ -0.34
FXR1-212ENST00000476672 HAX1O00165 279 aa12.88□□□□□ -0.35
FXR1-212ENST00000476672 SUPT5HO00267 1087 aaKnown RBP12.86□□□□□ -0.35
FXR1-212ENST00000476672 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
FXR1-212ENST00000476672 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
FXR1-212ENST00000476672 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
FXR1-212ENST00000476672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
FXR1-212ENST00000476672 EVX2Q03828 476 aa12.68□□□□□ -0.38
FXR1-212ENST00000476672 HNRNPUL2Q1KMD3 747 aaKnown RBP12.68□□□□□ -0.38
FXR1-212ENST00000476672 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
FXR1-212ENST00000476672 RSF1Q96T23 1441 aaPredicted RBP12.65□□□□□ -0.38
FXR1-212ENST00000476672 LHX8Q68G74 356 aa12.64□□□□□ -0.39
FXR1-212ENST00000476672 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
FXR1-212ENST00000476672 CECR2Q9BXF3 1484 aa12.6□□□□□ -0.39
FXR1-212ENST00000476672 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
FXR1-212ENST00000476672 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
FXR1-212ENST00000476672 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
FXR1-212ENST00000476672 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
FXR1-212ENST00000476672 POLA2Q14181 598 aa12.55□□□□□ -0.4
FXR1-212ENST00000476672 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
FXR1-212ENST00000476672 PABPN1Q86U42 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
FXR1-212ENST00000476672 BAZ1AQ9NRL2 1556 aaPredicted RBP12.52□□□□□ -0.4
FXR1-212ENST00000476672 PITPNM1O00562 1244 aa12.43□□□□□ -0.42
FXR1-212ENST00000476672 SMARCA4P51532 1647 aa12.43□□□□□ -0.42
FXR1-212ENST00000476672 WIZO95785 1651 aa12.41□□□□□ -0.42
FXR1-212ENST00000476672 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
FXR1-212ENST00000476672 PEG3Q9GZU2 1588 aa12.3□□□□□ -0.44
FXR1-212ENST00000476672 GABBR2O75899 941 aa12.3□□□□□ -0.44
FXR1-212ENST00000476672 ATAD2BQ9ULI0 1458 aa12.24□□□□□ -0.45
FXR1-212ENST00000476672 SMARCA2P51531 1590 aa12.22□□□□□ -0.45
FXR1-212ENST00000476672 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.45
FXR1-212ENST00000476672 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
FXR1-212ENST00000476672 ZBTB12Q9Y330 459 aaPredicted RBP12.18□□□□□ -0.46
FXR1-212ENST00000476672 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
FXR1-212ENST00000476672 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
FXR1-212ENST00000476672 BAZ1BQ9UIG0 1483 aaKnown RBP12.15□□□□□ -0.46
FXR1-212ENST00000476672 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
FXR1-212ENST00000476672 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
FXR1-212ENST00000476672 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
FXR1-212ENST00000476672 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
FXR1-212ENST00000476672 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
FXR1-212ENST00000476672 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
FXR1-212ENST00000476672 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.5
FXR1-212ENST00000476672 POTEMA6NI47 508 aa11.95□□□□□ -0.5
FXR1-212ENST00000476672 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
FXR1-212ENST00000476672 LOC105371045A0A1W2PR82 267 aa11.92□□□□□ -0.5
FXR1-212ENST00000476672 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
FXR1-212ENST00000476672 CFTRP13569 1480 aa11.89□□□□□ -0.51
FXR1-212ENST00000476672 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
FXR1-212ENST00000476672 FAM9AQ8IZU1 332 aaPredicted RBP11.86□□□□□ -0.51
FXR1-212ENST00000476672 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
FXR1-212ENST00000476672 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms