RNA–Protein interactions for RNA: ENST00000473064.1

CNOT10-213, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 530 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-213ENST00000473064 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
CNOT10-213ENST00000473064 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
CNOT10-213ENST00000473064 PHF23Q9BUL5 403 aaPredicted RBP15.81■□□□□ 0.12
CNOT10-213ENST00000473064 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
CNOT10-213ENST00000473064 PLPPR3Q6T4P5 718 aa14.55□□□□□ -0.08
CNOT10-213ENST00000473064 FOXD1Q16676 465 aa14.27□□□□□ -0.13
CNOT10-213ENST00000473064 PPP6R1Q9UPN7 881 aa13.91□□□□□ -0.18
CNOT10-213ENST00000473064 ADRA2BP18089 450 aa13.88□□□□□ -0.19
CNOT10-213ENST00000473064 PIAS4Q8N2W9 510 aaPredicted RBP13.46□□□□□ -0.25
CNOT10-213ENST00000473064 MSH5O43196 834 aa13.01□□□□□ -0.33
CNOT10-213ENST00000473064 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
CNOT10-213ENST00000473064 KCNA4P22459 653 aa12.81□□□□□ -0.36
CNOT10-213ENST00000473064 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
CNOT10-213ENST00000473064 SCAF1Q9H7N4 1312 aaKnown RBP12.56□□□□□ -0.4
CNOT10-213ENST00000473064 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
CNOT10-213ENST00000473064 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
CNOT10-213ENST00000473064 NPM3O75607 178 aaKnown RBP12.42□□□□□ -0.42
CNOT10-213ENST00000473064 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
CNOT10-213ENST00000473064 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
CNOT10-213ENST00000473064 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
CNOT10-213ENST00000473064 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
CNOT10-213ENST00000473064 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
CNOT10-213ENST00000473064 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
CNOT10-213ENST00000473064 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
CNOT10-213ENST00000473064 ZBTB22O15209 634 aa11.84□□□□□ -0.51
CNOT10-213ENST00000473064 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
CNOT10-213ENST00000473064 SLC4A2P04920 1241 aa11.72□□□□□ -0.53
CNOT10-213ENST00000473064 NISCHQ9Y2I1 1504 aa11.7□□□□□ -0.54
CNOT10-213ENST00000473064 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
CNOT10-213ENST00000473064 POTEDQ86YR6 584 aa11.64□□□□□ -0.55
CNOT10-213ENST00000473064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
CNOT10-213ENST00000473064 ABCC9O60706 1549 aa11.49□□□□□ -0.57
CNOT10-213ENST00000473064 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
CNOT10-213ENST00000473064 U3KPZ7 1027 aaPredicted RBP11.39□□□□□ -0.59
CNOT10-213ENST00000473064 ATXN8OSP0DMR3 200 aa11.22□□□□□ -0.61
CNOT10-213ENST00000473064 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
CNOT10-213ENST00000473064 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.61
CNOT10-213ENST00000473064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.18□□□□□ -0.62
CNOT10-213ENST00000473064 HNRNPUL2Q1KMD3 747 aaKnown RBP11.18□□□□□ -0.62
CNOT10-213ENST00000473064 SAMD1Q6SPF0 538 aaPredicted RBP11.18□□□□□ -0.62
CNOT10-213ENST00000473064 C1QBPQ07021 282 aaKnown RBP11.04□□□□□ -0.64
CNOT10-213ENST00000473064 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
CNOT10-213ENST00000473064 APLP2Q06481 763 aa10.99□□□□□ -0.65
CNOT10-213ENST00000473064 ZNF219Q9P2Y4 722 aaPredicted RBP10.95□□□□□ -0.66
CNOT10-213ENST00000473064 CAPN15O75808 1086 aa10.93□□□□□ -0.66
CNOT10-213ENST00000473064 TRHP20396 242 aaPredicted RBP10.93□□□□□ -0.66
CNOT10-213ENST00000473064 CCDC180Q9P1Z9 1646 aa10.88□□□□□ -0.67
CNOT10-213ENST00000473064 DNAJC5Q9H3Z4 198 aa10.86□□□□□ -0.67
CNOT10-213ENST00000473064 POLA2Q14181 598 aa10.8□□□□□ -0.68
CNOT10-213ENST00000473064 ABCB7O75027 752 aa10.79□□□□□ -0.68
CNOT10-213ENST00000473064 CACNB1Q02641 598 aaPredicted RBP10.77□□□□□ -0.69
CNOT10-213ENST00000473064 DSG3P32926 999 aa10.74□□□□□ -0.69
CNOT10-213ENST00000473064 MKRN4PQ13434 485 aaPredicted RBP10.72□□□□□ -0.69
CNOT10-213ENST00000473064 FKBP8Q14318 412 aa10.67□□□□□ -0.7
CNOT10-213ENST00000473064 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.7
CNOT10-213ENST00000473064 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
CNOT10-213ENST00000473064 FBLN2P98095 1184 aa10.59□□□□□ -0.71
CNOT10-213ENST00000473064 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
CNOT10-213ENST00000473064 SPDYE4A6NLX3 237 aa10.49□□□□□ -0.73
CNOT10-213ENST00000473064 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
CNOT10-213ENST00000473064 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
CNOT10-213ENST00000473064 CECR2Q9BXF3 1484 aa10.39□□□□□ -0.75
CNOT10-213ENST00000473064 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
CNOT10-213ENST00000473064 PROM2Q8N271 834 aa10.37□□□□□ -0.75
CNOT10-213ENST00000473064 NACADO15069 1562 aa10.34□□□□□ -0.75
CNOT10-213ENST00000473064 BICRAQ9NZM4 1560 aa10.31□□□□□ -0.76
CNOT10-213ENST00000473064 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
CNOT10-213ENST00000473064 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
CNOT10-213ENST00000473064 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
CNOT10-213ENST00000473064 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
CNOT10-213ENST00000473064 SSUH2Q9Y2M2 353 aa10.3□□□□□ -0.76
CNOT10-213ENST00000473064 TRIM41Q8WV44 630 aa10.24□□□□□ -0.77
CNOT10-213ENST00000473064 CUX2O14529 1486 aa10.17□□□□□ -0.78
CNOT10-213ENST00000473064 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
CNOT10-213ENST00000473064 EIF4G1Q04637 1599 aaKnown RBP10.15□□□□□ -0.78
CNOT10-213ENST00000473064 RBM42Q9BTD8 480 aaKnown RBP10.14□□□□□ -0.79
CNOT10-213ENST00000473064 DCAF8L2P0C7V8 631 aa10.11□□□□□ -0.79
CNOT10-213ENST00000473064 VASPP50552 380 aaPredicted RBP10.1□□□□□ -0.79
CNOT10-213ENST00000473064 AKT1S1Q96B36 256 aa10.08□□□□□ -0.8
CNOT10-213ENST00000473064 SHROOM4Q9ULL8 1493 aa10.05□□□□□ -0.8
CNOT10-213ENST00000473064 RTN4Q9NQC3 1192 aaKnown RBP10.04□□□□□ -0.8
CNOT10-213ENST00000473064 REM2Q8IYK8 340 aaPredicted RBP10.03□□□□□ -0.8
CNOT10-213ENST00000473064 ERCC6Q03468 1493 aa10.02□□□□□ -0.81
CNOT10-213ENST00000473064 IFNLR1Q8IU57 520 aaPredicted RBP10.01□□□□□ -0.81
CNOT10-213ENST00000473064 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
CNOT10-213ENST00000473064 SPDYE1Q8NFV5 336 aaPredicted RBP9.97□□□□□ -0.81
CNOT10-213ENST00000473064 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.82
CNOT10-213ENST00000473064 MYO15BQ96JP2 1530 aa9.95□□□□□ -0.82
CNOT10-213ENST00000473064 CLEC11AQ9Y240 323 aa9.94□□□□□ -0.82
CNOT10-213ENST00000473064 PITPNM1O00562 1244 aa9.93□□□□□ -0.82
CNOT10-213ENST00000473064 MIER1Q8N108 512 aa9.91□□□□□ -0.82
CNOT10-213ENST00000473064 PLCD3Q8N3E9 789 aa9.9□□□□□ -0.82
CNOT10-213ENST00000473064 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
CNOT10-213ENST00000473064 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
CNOT10-213ENST00000473064 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
CNOT10-213ENST00000473064 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
CNOT10-213ENST00000473064 SPOCK2Q92563 424 aa9.8□□□□□ -0.84
CNOT10-213ENST00000473064 THOC2Q8NI27 1593 aaKnown RBP9.78□□□□□ -0.84
CNOT10-213ENST00000473064 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
CNOT10-213ENST00000473064 PLEKHG5O94827 1062 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms