RNA–Protein interactions for RNA: ENST00000471122.5

GRIN1-211, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIN1, Length 4,184 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-211ENST00000471122 NISCHQ9Y2I1 1504 aa22.63■■□□□ 1.21
GRIN1-211ENST00000471122 DCAF8L2P0C7V8 631 aa21.84■■□□□ 1.09
GRIN1-211ENST00000471122 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
GRIN1-211ENST00000471122 SHROOM4Q9ULL8 1493 aa21.17■□□□□ 0.98
GRIN1-211ENST00000471122 EHMT2Q96KQ7 1210 aa20.24■□□□□ 0.83
GRIN1-211ENST00000471122 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
GRIN1-211ENST00000471122 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
GRIN1-211ENST00000471122 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
GRIN1-211ENST00000471122 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.73
GRIN1-211ENST00000471122 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
GRIN1-211ENST00000471122 APLP2Q06481 763 aa19.43■□□□□ 0.7
GRIN1-211ENST00000471122 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
GRIN1-211ENST00000471122 CCDC180Q9P1Z9 1646 aa19.37■□□□□ 0.69
GRIN1-211ENST00000471122 HRCP23327 699 aa19.35■□□□□ 0.69
GRIN1-211ENST00000471122 ZEB1P37275 1124 aaPredicted RBP19.35■□□□□ 0.69
GRIN1-211ENST00000471122 CCER1Q8TC90 406 aaPredicted RBP19.27■□□□□ 0.68
GRIN1-211ENST00000471122 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.67
GRIN1-211ENST00000471122 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
GRIN1-211ENST00000471122 RANGAP1P46060 587 aaPredicted RBP19.25■□□□□ 0.67
GRIN1-211ENST00000471122 UBTFP17480 764 aaKnown RBP19.21■□□□□ 0.67
GRIN1-211ENST00000471122 CENPBP07199 599 aaPredicted RBP18.97■□□□□ 0.63
GRIN1-211ENST00000471122 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.62
GRIN1-211ENST00000471122 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
GRIN1-211ENST00000471122 ABCC9O60706 1549 aa18.83■□□□□ 0.6
GRIN1-211ENST00000471122 ATP1B4Q9UN42 357 aaPredicted RBP18.82■□□□□ 0.6
GRIN1-211ENST00000471122 YTHDC1Q96MU7 727 aaKnown RBP18.75■□□□□ 0.59
GRIN1-211ENST00000471122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
GRIN1-211ENST00000471122 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
GRIN1-211ENST00000471122 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.57
GRIN1-211ENST00000471122 ITGAEP38570 1179 aa18.55■□□□□ 0.56
GRIN1-211ENST00000471122 DIEXFQ68CQ4 756 aaKnown RBP18.45■□□□□ 0.54
GRIN1-211ENST00000471122 MYO15BQ96JP2 1530 aa18.44■□□□□ 0.54
GRIN1-211ENST00000471122 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
GRIN1-211ENST00000471122 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
GRIN1-211ENST00000471122 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
GRIN1-211ENST00000471122 NEFLP07196 543 aa18.27■□□□□ 0.51
GRIN1-211ENST00000471122 RSF1Q96T23 1441 aaPredicted RBP18.18■□□□□ 0.5
GRIN1-211ENST00000471122 GTF3C3Q9Y5Q9 886 aa18.11■□□□□ 0.49
GRIN1-211ENST00000471122 ERICH6Q7L0X2 663 aa18.1■□□□□ 0.49
GRIN1-211ENST00000471122 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
GRIN1-211ENST00000471122 FAM50AQ14320 339 aaKnown RBP18.1■□□□□ 0.49
GRIN1-211ENST00000471122 NEUROD1Q13562 356 aa18■□□□□ 0.47
GRIN1-211ENST00000471122 ACIN1Q9UKV3 1341 aaKnown RBP17.99■□□□□ 0.47
GRIN1-211ENST00000471122 POLR3GLQ9BT43 218 aa17.96■□□□□ 0.47
GRIN1-211ENST00000471122 MYT1Q01538 1121 aa17.95■□□□□ 0.46
GRIN1-211ENST00000471122 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
GRIN1-211ENST00000471122 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
GRIN1-211ENST00000471122 CECR2Q9BXF3 1484 aa17.85■□□□□ 0.45
GRIN1-211ENST00000471122 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
GRIN1-211ENST00000471122 NACADO15069 1562 aa17.8■□□□□ 0.44
GRIN1-211ENST00000471122 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
GRIN1-211ENST00000471122 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
GRIN1-211ENST00000471122 BCANQ96GW7 911 aa17.75■□□□□ 0.43
GRIN1-211ENST00000471122 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
GRIN1-211ENST00000471122 CLIP1P30622 1438 aa17.72■□□□□ 0.43
GRIN1-211ENST00000471122 ANP32CO43423 234 aa17.71■□□□□ 0.43
GRIN1-211ENST00000471122 EEA1Q15075 1411 aa17.68■□□□□ 0.42
GRIN1-211ENST00000471122 MYT1LQ9UL68 1186 aa17.66■□□□□ 0.42
GRIN1-211ENST00000471122 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
GRIN1-211ENST00000471122 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
GRIN1-211ENST00000471122 GOLGA3Q08378 1498 aa17.64■□□□□ 0.41
GRIN1-211ENST00000471122 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
GRIN1-211ENST00000471122 MIER1Q8N108 512 aa17.63■□□□□ 0.41
GRIN1-211ENST00000471122 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
GRIN1-211ENST00000471122 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
GRIN1-211ENST00000471122 ZNF326Q5BKZ1 582 aaKnown RBP17.59■□□□□ 0.41
GRIN1-211ENST00000471122 FBLN2P98095 1184 aa17.56■□□□□ 0.4
GRIN1-211ENST00000471122 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
GRIN1-211ENST00000471122 SOGA1O94964 1423 aa17.56■□□□□ 0.4
GRIN1-211ENST00000471122 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
GRIN1-211ENST00000471122 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
GRIN1-211ENST00000471122 CEP164Q9UPV0 1460 aa17.49■□□□□ 0.39
GRIN1-211ENST00000471122 TONSLQ96HA7 1378 aa17.48■□□□□ 0.39
GRIN1-211ENST00000471122 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
GRIN1-211ENST00000471122 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
GRIN1-211ENST00000471122 ZNF777Q9ULD5 760 aaPredicted RBP17.42■□□□□ 0.38
GRIN1-211ENST00000471122 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
GRIN1-211ENST00000471122 CHIC2Q9UKJ5 165 aa17.41■□□□□ 0.38
GRIN1-211ENST00000471122 FKBP8Q14318 412 aa17.41■□□□□ 0.38
GRIN1-211ENST00000471122 WIZO95785 1651 aa17.4■□□□□ 0.38
GRIN1-211ENST00000471122 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.37
GRIN1-211ENST00000471122 CDK11AQ9UQ88 783 aaPredicted RBP17.38■□□□□ 0.37
GRIN1-211ENST00000471122 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
GRIN1-211ENST00000471122 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
GRIN1-211ENST00000471122 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
GRIN1-211ENST00000471122 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
GRIN1-211ENST00000471122 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
GRIN1-211ENST00000471122 FAM9BQ8IZU0 186 aa17.26■□□□□ 0.35
GRIN1-211ENST00000471122 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
GRIN1-211ENST00000471122 RRP7BPQ9NSQ0 103 aa17.24■□□□□ 0.35
GRIN1-211ENST00000471122 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
GRIN1-211ENST00000471122 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
GRIN1-211ENST00000471122 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
GRIN1-211ENST00000471122 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.35
GRIN1-211ENST00000471122 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
GRIN1-211ENST00000471122 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
GRIN1-211ENST00000471122 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
GRIN1-211ENST00000471122 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
GRIN1-211ENST00000471122 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
GRIN1-211ENST00000471122 EIF4G2P78344 907 aaKnown RBP eCLIP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms