RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
TMC1-203ENST00000469455 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
TMC1-203ENST00000469455 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
TMC1-203ENST00000469455 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
TMC1-203ENST00000469455 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
TMC1-203ENST00000469455 FOXD1Q16676 465 aa17.69■□□□□ 0.42
TMC1-203ENST00000469455 ADRA2BP18089 450 aa17.51■□□□□ 0.39
TMC1-203ENST00000469455 PPP6R1Q9UPN7 881 aa17.5■□□□□ 0.39
TMC1-203ENST00000469455 KCNA4P22459 653 aa16.88■□□□□ 0.29
TMC1-203ENST00000469455 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
TMC1-203ENST00000469455 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
TMC1-203ENST00000469455 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
TMC1-203ENST00000469455 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
TMC1-203ENST00000469455 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
TMC1-203ENST00000469455 MSH5O43196 834 aa16.1■□□□□ 0.17
TMC1-203ENST00000469455 NPM3O75607 178 aaKnown RBP16.09■□□□□ 0.17
TMC1-203ENST00000469455 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
TMC1-203ENST00000469455 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
TMC1-203ENST00000469455 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
TMC1-203ENST00000469455 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
TMC1-203ENST00000469455 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
TMC1-203ENST00000469455 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
TMC1-203ENST00000469455 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
TMC1-203ENST00000469455 ZBTB22O15209 634 aa15.52■□□□□ 0.08
TMC1-203ENST00000469455 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
TMC1-203ENST00000469455 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
TMC1-203ENST00000469455 HOXD11P31277 338 aaPredicted RBP15.32■□□□□ 0.04
TMC1-203ENST00000469455 SLC4A2P04920 1241 aa15.04■□□□□ -0
TMC1-203ENST00000469455 MYCNP04198 464 aaPredicted RBP14.86□□□□□ -0.03
TMC1-203ENST00000469455 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
TMC1-203ENST00000469455 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
TMC1-203ENST00000469455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.08
TMC1-203ENST00000469455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
TMC1-203ENST00000469455 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
TMC1-203ENST00000469455 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
TMC1-203ENST00000469455 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
TMC1-203ENST00000469455 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
TMC1-203ENST00000469455 FKBP8Q14318 412 aa14.38□□□□□ -0.11
TMC1-203ENST00000469455 AMER1Q5JTC6 1135 aaPredicted RBP14.2□□□□□ -0.14
TMC1-203ENST00000469455 APLP2Q06481 763 aa14.18□□□□□ -0.14
TMC1-203ENST00000469455 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
TMC1-203ENST00000469455 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
TMC1-203ENST00000469455 CCDC180Q9P1Z9 1646 aa14.04□□□□□ -0.16
TMC1-203ENST00000469455 RNF39Q9H2S5 420 aa13.84□□□□□ -0.19
TMC1-203ENST00000469455 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
TMC1-203ENST00000469455 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
TMC1-203ENST00000469455 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
TMC1-203ENST00000469455 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
TMC1-203ENST00000469455 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
TMC1-203ENST00000469455 FBLN2P98095 1184 aa13.78□□□□□ -0.2
TMC1-203ENST00000469455 POLA2Q14181 598 aa13.76□□□□□ -0.21
TMC1-203ENST00000469455 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
TMC1-203ENST00000469455 CAPN15O75808 1086 aa13.74□□□□□ -0.21
TMC1-203ENST00000469455 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
TMC1-203ENST00000469455 PROM2Q8N271 834 aa13.68□□□□□ -0.22
TMC1-203ENST00000469455 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
TMC1-203ENST00000469455 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
TMC1-203ENST00000469455 ABCB7O75027 752 aa13.51□□□□□ -0.25
TMC1-203ENST00000469455 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
TMC1-203ENST00000469455 DSG3P32926 999 aa13.38□□□□□ -0.27
TMC1-203ENST00000469455 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
TMC1-203ENST00000469455 ABCC9O60706 1549 aa13.31□□□□□ -0.28
TMC1-203ENST00000469455 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
TMC1-203ENST00000469455 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
TMC1-203ENST00000469455 SPDYE2BA6NHP3 402 aa13.27□□□□□ -0.29
TMC1-203ENST00000469455 SPDYE6P0CI01 402 aa13.27□□□□□ -0.29
TMC1-203ENST00000469455 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.29
TMC1-203ENST00000469455 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
TMC1-203ENST00000469455 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
TMC1-203ENST00000469455 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
TMC1-203ENST00000469455 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
TMC1-203ENST00000469455 PKD2Q13563 968 aa13.16□□□□□ -0.3
TMC1-203ENST00000469455 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMC1-203ENST00000469455 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
TMC1-203ENST00000469455 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
TMC1-203ENST00000469455 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
TMC1-203ENST00000469455 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
TMC1-203ENST00000469455 DCAF8L2P0C7V8 631 aa13.08□□□□□ -0.32
TMC1-203ENST00000469455 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
TMC1-203ENST00000469455 NACADO15069 1562 aa13.06□□□□□ -0.32
TMC1-203ENST00000469455 MIER1Q8N108 512 aa13.04□□□□□ -0.32
TMC1-203ENST00000469455 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
TMC1-203ENST00000469455 RB1CC1Q8TDY2 1594 aa12.99□□□□□ -0.33
TMC1-203ENST00000469455 ECM2O94769 699 aaPredicted RBP12.97□□□□□ -0.33
TMC1-203ENST00000469455 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
TMC1-203ENST00000469455 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
TMC1-203ENST00000469455 HAP1P54257 671 aaPredicted RBP12.89□□□□□ -0.35
TMC1-203ENST00000469455 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
TMC1-203ENST00000469455 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.83□□□□□ -0.36
TMC1-203ENST00000469455 RGL2O15211 777 aa12.81□□□□□ -0.36
TMC1-203ENST00000469455 UNC13AQ9UPW8 1703 aa12.81□□□□□ -0.36
TMC1-203ENST00000469455 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
TMC1-203ENST00000469455 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMC1-203ENST00000469455 SCRIBQ14160 1630 aa12.77□□□□□ -0.37
TMC1-203ENST00000469455 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
TMC1-203ENST00000469455 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
TMC1-203ENST00000469455 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
TMC1-203ENST00000469455 SPDYE1Q8NFV5 336 aaPredicted RBP12.73□□□□□ -0.37
TMC1-203ENST00000469455 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
TMC1-203ENST00000469455 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms