RNA–Protein interactions for RNA: ENST00000468874.2

TMEM50B-206, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 724 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-206ENST00000468874 AEBP2Q6ZN18 517 aaPredicted RBP27.73■■■□□ 2.03
TMEM50B-206ENST00000468874 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
TMEM50B-206ENST00000468874 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
TMEM50B-206ENST00000468874 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
TMEM50B-206ENST00000468874 FOXD1Q16676 465 aa21.92■■□□□ 1.1
TMEM50B-206ENST00000468874 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
TMEM50B-206ENST00000468874 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
TMEM50B-206ENST00000468874 ADRA2BP18089 450 aa20.8■□□□□ 0.92
TMEM50B-206ENST00000468874 PIAS4Q8N2W9 510 aaPredicted RBP20.57■□□□□ 0.88
TMEM50B-206ENST00000468874 MSH5O43196 834 aa20.35■□□□□ 0.85
TMEM50B-206ENST00000468874 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
TMEM50B-206ENST00000468874 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
TMEM50B-206ENST00000468874 PPP4R3CPQ6ZMV5 832 aa19.01■□□□□ 0.63
TMEM50B-206ENST00000468874 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
TMEM50B-206ENST00000468874 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
TMEM50B-206ENST00000468874 CNKSR2Q8WXI2 1034 aa18.56■□□□□ 0.56
TMEM50B-206ENST00000468874 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
TMEM50B-206ENST00000468874 HOXD11P31277 338 aaPredicted RBP18.3■□□□□ 0.52
TMEM50B-206ENST00000468874 RNF216Q9NWF9 866 aaPredicted RBP18.28■□□□□ 0.52
TMEM50B-206ENST00000468874 KCNA4P22459 653 aa18.21■□□□□ 0.51
TMEM50B-206ENST00000468874 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
TMEM50B-206ENST00000468874 NISCHQ9Y2I1 1504 aa18■□□□□ 0.47
TMEM50B-206ENST00000468874 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
TMEM50B-206ENST00000468874 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
TMEM50B-206ENST00000468874 RNF39Q9H2S5 420 aa17.41■□□□□ 0.38
TMEM50B-206ENST00000468874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
TMEM50B-206ENST00000468874 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
TMEM50B-206ENST00000468874 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
TMEM50B-206ENST00000468874 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
TMEM50B-206ENST00000468874 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
TMEM50B-206ENST00000468874 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
TMEM50B-206ENST00000468874 ABCC9O60706 1549 aa16.91■□□□□ 0.3
TMEM50B-206ENST00000468874 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
TMEM50B-206ENST00000468874 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
TMEM50B-206ENST00000468874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
TMEM50B-206ENST00000468874 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
TMEM50B-206ENST00000468874 ZBTB22O15209 634 aa16.75■□□□□ 0.27
TMEM50B-206ENST00000468874 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
TMEM50B-206ENST00000468874 APLP2Q06481 763 aa16.68■□□□□ 0.26
TMEM50B-206ENST00000468874 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
TMEM50B-206ENST00000468874 CAPN15O75808 1086 aa16.61■□□□□ 0.25
TMEM50B-206ENST00000468874 ZNF219Q9P2Y4 722 aaPredicted RBP16.49■□□□□ 0.23
TMEM50B-206ENST00000468874 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
TMEM50B-206ENST00000468874 DSG3P32926 999 aa16.45■□□□□ 0.22
TMEM50B-206ENST00000468874 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
TMEM50B-206ENST00000468874 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
TMEM50B-206ENST00000468874 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
TMEM50B-206ENST00000468874 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
TMEM50B-206ENST00000468874 ATXN8OSP0DMR3 200 aa16.34■□□□□ 0.21
TMEM50B-206ENST00000468874 ABCB7O75027 752 aa16.26■□□□□ 0.19
TMEM50B-206ENST00000468874 POLA2Q14181 598 aa16.15■□□□□ 0.18
TMEM50B-206ENST00000468874 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
TMEM50B-206ENST00000468874 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
TMEM50B-206ENST00000468874 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
TMEM50B-206ENST00000468874 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
TMEM50B-206ENST00000468874 NACADO15069 1562 aa15.69■□□□□ 0.1
TMEM50B-206ENST00000468874 FBLN2P98095 1184 aa15.67■□□□□ 0.1
TMEM50B-206ENST00000468874 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
TMEM50B-206ENST00000468874 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
TMEM50B-206ENST00000468874 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
TMEM50B-206ENST00000468874 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
TMEM50B-206ENST00000468874 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
TMEM50B-206ENST00000468874 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
TMEM50B-206ENST00000468874 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
TMEM50B-206ENST00000468874 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
TMEM50B-206ENST00000468874 BICRAQ9NZM4 1560 aa15.38■□□□□ 0.05
TMEM50B-206ENST00000468874 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
TMEM50B-206ENST00000468874 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
TMEM50B-206ENST00000468874 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.05
TMEM50B-206ENST00000468874 ZNF692Q9BU19 519 aaPredicted RBP15.3■□□□□ 0.04
TMEM50B-206ENST00000468874 SSUH2Q9Y2M2 353 aa15.29■□□□□ 0.04
TMEM50B-206ENST00000468874 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
TMEM50B-206ENST00000468874 REM2Q8IYK8 340 aaPredicted RBP15.27■□□□□ 0.04
TMEM50B-206ENST00000468874 CC2D2AQ9P2K1 1620 aa15.25■□□□□ 0.03
TMEM50B-206ENST00000468874 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
TMEM50B-206ENST00000468874 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
TMEM50B-206ENST00000468874 PITPNM1O00562 1244 aa15.09■□□□□ 0.01
TMEM50B-206ENST00000468874 EIF4G1Q04637 1599 aaKnown RBP15.09■□□□□ 0.01
TMEM50B-206ENST00000468874 SPDYE1Q8NFV5 336 aaPredicted RBP15.04■□□□□ -0
TMEM50B-206ENST00000468874 POTEHQ6S545 545 aa15.01□□□□□ -0.01
TMEM50B-206ENST00000468874 CLEC11AQ9Y240 323 aa14.94□□□□□ -0.02
TMEM50B-206ENST00000468874 CUX2O14529 1486 aa14.91□□□□□ -0.02
TMEM50B-206ENST00000468874 FXR2P51116 673 aaKnown RBP eCLIP14.91□□□□□ -0.02
TMEM50B-206ENST00000468874 DCAF1Q9Y4B6 1507 aa14.89□□□□□ -0.03
TMEM50B-206ENST00000468874 PROM2Q8N271 834 aa14.88□□□□□ -0.03
TMEM50B-206ENST00000468874 PIP4P2Q8N4L2 257 aa14.88□□□□□ -0.03
TMEM50B-206ENST00000468874 SCRIBQ14160 1630 aa14.83□□□□□ -0.04
TMEM50B-206ENST00000468874 FKBP8Q14318 412 aa14.82□□□□□ -0.04
TMEM50B-206ENST00000468874 STAG3Q9UJ98 1225 aa14.81□□□□□ -0.04
TMEM50B-206ENST00000468874 PRR29P0C7W0 189 aa14.79□□□□□ -0.04
TMEM50B-206ENST00000468874 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
TMEM50B-206ENST00000468874 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
TMEM50B-206ENST00000468874 PRKAR2AP13861 404 aaKnown RBP14.7□□□□□ -0.06
TMEM50B-206ENST00000468874 CHADLQ6NUI6 762 aa14.62□□□□□ -0.07
TMEM50B-206ENST00000468874 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
TMEM50B-206ENST00000468874 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
TMEM50B-206ENST00000468874 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
TMEM50B-206ENST00000468874 FARP1Q9Y4F1 1045 aaPredicted RBP14.48□□□□□ -0.09
TMEM50B-206ENST00000468874 HAX1O00165 279 aa14.46□□□□□ -0.09
TMEM50B-206ENST00000468874 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms