RNA–Protein interactions for RNA: ENST00000468700.1

NR1D2-203, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

TSL 3

Gene NR1D2, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-203ENST00000468700 AEBP2Q6ZN18 517 aaPredicted RBP25.43■■□□□ 1.66
NR1D2-203ENST00000468700 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
NR1D2-203ENST00000468700 PHF23Q9BUL5 403 aaPredicted RBP22.09■■□□□ 1.13
NR1D2-203ENST00000468700 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
NR1D2-203ENST00000468700 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
NR1D2-203ENST00000468700 FOXD1Q16676 465 aa19.94■□□□□ 0.78
NR1D2-203ENST00000468700 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
NR1D2-203ENST00000468700 ADRA2BP18089 450 aa19.42■□□□□ 0.7
NR1D2-203ENST00000468700 PIAS4Q8N2W9 510 aaPredicted RBP18.84■□□□□ 0.61
NR1D2-203ENST00000468700 MSH5O43196 834 aa18.2■□□□□ 0.5
NR1D2-203ENST00000468700 PPP4R3CPQ6ZMV5 832 aa18.05■□□□□ 0.48
NR1D2-203ENST00000468700 KCNA4P22459 653 aa17.96■□□□□ 0.47
NR1D2-203ENST00000468700 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
NR1D2-203ENST00000468700 NCBP3Q53F19 620 aaKnown RBP17.58■□□□□ 0.4
NR1D2-203ENST00000468700 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
NR1D2-203ENST00000468700 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
NR1D2-203ENST00000468700 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
NR1D2-203ENST00000468700 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
NR1D2-203ENST00000468700 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
NR1D2-203ENST00000468700 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
NR1D2-203ENST00000468700 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
NR1D2-203ENST00000468700 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
NR1D2-203ENST00000468700 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
NR1D2-203ENST00000468700 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
NR1D2-203ENST00000468700 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
NR1D2-203ENST00000468700 ZBTB22O15209 634 aa16.55■□□□□ 0.24
NR1D2-203ENST00000468700 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
NR1D2-203ENST00000468700 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
NR1D2-203ENST00000468700 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
NR1D2-203ENST00000468700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.17
NR1D2-203ENST00000468700 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
NR1D2-203ENST00000468700 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
NR1D2-203ENST00000468700 NISCHQ9Y2I1 1504 aa15.75■□□□□ 0.11
NR1D2-203ENST00000468700 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
NR1D2-203ENST00000468700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
NR1D2-203ENST00000468700 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
NR1D2-203ENST00000468700 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
NR1D2-203ENST00000468700 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
NR1D2-203ENST00000468700 RNF39Q9H2S5 420 aa15.66■□□□□ 0.1
NR1D2-203ENST00000468700 APLP2Q06481 763 aa15.46■□□□□ 0.07
NR1D2-203ENST00000468700 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
NR1D2-203ENST00000468700 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
NR1D2-203ENST00000468700 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
NR1D2-203ENST00000468700 CAPN15O75808 1086 aa15.33■□□□□ 0.04
NR1D2-203ENST00000468700 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
NR1D2-203ENST00000468700 POLA2Q14181 598 aa15.13■□□□□ 0.01
NR1D2-203ENST00000468700 ABCB7O75027 752 aa15.09■□□□□ 0.01
NR1D2-203ENST00000468700 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
NR1D2-203ENST00000468700 DSG3P32926 999 aa15.01□□□□□ -0.01
NR1D2-203ENST00000468700 FKBP8Q14318 412 aa15.01□□□□□ -0.01
NR1D2-203ENST00000468700 MKRN4PQ13434 485 aaPredicted RBP14.99□□□□□ -0.01
NR1D2-203ENST00000468700 FBLN2P98095 1184 aa14.89□□□□□ -0.03
NR1D2-203ENST00000468700 ZBTB12Q9Y330 459 aaPredicted RBP14.8□□□□□ -0.04
NR1D2-203ENST00000468700 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
NR1D2-203ENST00000468700 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
NR1D2-203ENST00000468700 PROM2Q8N271 834 aa14.51□□□□□ -0.09
NR1D2-203ENST00000468700 ABCC9O60706 1549 aa14.48□□□□□ -0.09
NR1D2-203ENST00000468700 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
NR1D2-203ENST00000468700 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
NR1D2-203ENST00000468700 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
NR1D2-203ENST00000468700 SPDYE2Q495Y8 402 aa14.46□□□□□ -0.09
NR1D2-203ENST00000468700 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
NR1D2-203ENST00000468700 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
NR1D2-203ENST00000468700 PABPN1Q86U42 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
NR1D2-203ENST00000468700 FBXO3Q9UK99 471 aa14.32□□□□□ -0.12
NR1D2-203ENST00000468700 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
NR1D2-203ENST00000468700 VASPP50552 380 aaPredicted RBP14.18□□□□□ -0.14
NR1D2-203ENST00000468700 AKT1S1Q96B36 256 aa14.13□□□□□ -0.15
NR1D2-203ENST00000468700 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
NR1D2-203ENST00000468700 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
NR1D2-203ENST00000468700 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
NR1D2-203ENST00000468700 IFNLR1Q8IU57 520 aaPredicted RBP14.04□□□□□ -0.16
NR1D2-203ENST00000468700 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
NR1D2-203ENST00000468700 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
NR1D2-203ENST00000468700 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
NR1D2-203ENST00000468700 MIER1Q8N108 512 aa13.95□□□□□ -0.18
NR1D2-203ENST00000468700 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
NR1D2-203ENST00000468700 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
NR1D2-203ENST00000468700 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
NR1D2-203ENST00000468700 PRR29P0C7W0 189 aa13.84□□□□□ -0.19
NR1D2-203ENST00000468700 SPOCK2Q92563 424 aa13.79□□□□□ -0.2
NR1D2-203ENST00000468700 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
NR1D2-203ENST00000468700 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
NR1D2-203ENST00000468700 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
NR1D2-203ENST00000468700 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
NR1D2-203ENST00000468700 PKD2Q13563 968 aa13.67□□□□□ -0.22
NR1D2-203ENST00000468700 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
NR1D2-203ENST00000468700 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
NR1D2-203ENST00000468700 NACADO15069 1562 aa13.62□□□□□ -0.23
NR1D2-203ENST00000468700 NUBP1P53384 320 aa13.58□□□□□ -0.24
NR1D2-203ENST00000468700 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
NR1D2-203ENST00000468700 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
NR1D2-203ENST00000468700 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
NR1D2-203ENST00000468700 PRKAR2AP13861 404 aaKnown RBP13.53□□□□□ -0.24
NR1D2-203ENST00000468700 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
NR1D2-203ENST00000468700 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
NR1D2-203ENST00000468700 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
NR1D2-203ENST00000468700 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
NR1D2-203ENST00000468700 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
NR1D2-203ENST00000468700 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms