RNA–Protein interactions for RNA: ENST00000466757.7

CDH23-209, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 4,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-209ENST00000466757 NISCHQ9Y2I1 1504 aa27.69■■■□□ 2.02
CDH23-209ENST00000466757 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
CDH23-209ENST00000466757 SUPT5HO00267 1087 aaKnown RBP26.89■■□□□ 1.89
CDH23-209ENST00000466757 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
CDH23-209ENST00000466757 EHMT2Q96KQ7 1210 aa25.73■■□□□ 1.71
CDH23-209ENST00000466757 PCGF6Q9BYE7 350 aa25.49■■□□□ 1.67
CDH23-209ENST00000466757 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
CDH23-209ENST00000466757 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
CDH23-209ENST00000466757 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
CDH23-209ENST00000466757 APLP2Q06481 763 aa24.7■■□□□ 1.54
CDH23-209ENST00000466757 ZEB1P37275 1124 aaPredicted RBP24.62■■□□□ 1.53
CDH23-209ENST00000466757 HRCP23327 699 aa24.55■■□□□ 1.52
CDH23-209ENST00000466757 CCER1Q8TC90 406 aaPredicted RBP24.54■■□□□ 1.52
CDH23-209ENST00000466757 CHIC1Q5VXU3 224 aa24.52■■□□□ 1.52
CDH23-209ENST00000466757 PELP1Q8IZL8 1130 aaKnown RBP24.45■■□□□ 1.51
CDH23-209ENST00000466757 LOC105371045A0A1W2PR82 267 aa24.45■■□□□ 1.5
CDH23-209ENST00000466757 PPARGC1BQ86YN6 1023 aaKnown RBP24.41■■□□□ 1.5
CDH23-209ENST00000466757 RANGAP1P46060 587 aaPredicted RBP24.4■■□□□ 1.5
CDH23-209ENST00000466757 TRIM26Q12899 539 aaPredicted RBP24.37■■□□□ 1.49
CDH23-209ENST00000466757 CENPBP07199 599 aaPredicted RBP24.36■■□□□ 1.49
CDH23-209ENST00000466757 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
CDH23-209ENST00000466757 YTHDC1Q96MU7 727 aaKnown RBP24.05■■□□□ 1.44
CDH23-209ENST00000466757 ATP1B4Q9UN42 357 aaPredicted RBP23.87■■□□□ 1.41
CDH23-209ENST00000466757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.71■■□□□ 1.39
CDH23-209ENST00000466757 HNRNPUL2Q1KMD3 747 aaKnown RBP23.64■■□□□ 1.38
CDH23-209ENST00000466757 ITGAEP38570 1179 aa23.52■■□□□ 1.36
CDH23-209ENST00000466757 ERICH6Q7L0X2 663 aa23.49■■□□□ 1.35
CDH23-209ENST00000466757 NEFLP07196 543 aa23.49■■□□□ 1.35
CDH23-209ENST00000466757 DIEXFQ68CQ4 756 aaKnown RBP23.47■■□□□ 1.35
CDH23-209ENST00000466757 MYT1Q01538 1121 aa23.36■■□□□ 1.33
CDH23-209ENST00000466757 ABCC9O60706 1549 aa23.27■■□□□ 1.32
CDH23-209ENST00000466757 GTF3C3Q9Y5Q9 886 aa23.16■■□□□ 1.3
CDH23-209ENST00000466757 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
CDH23-209ENST00000466757 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
CDH23-209ENST00000466757 DCAF1Q9Y4B6 1507 aa22.96■■□□□ 1.27
CDH23-209ENST00000466757 POLR3GLQ9BT43 218 aa22.95■■□□□ 1.26
CDH23-209ENST00000466757 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.26
CDH23-209ENST00000466757 CNGB1Q14028 1251 aaPredicted RBP22.93■■□□□ 1.26
CDH23-209ENST00000466757 ACIN1Q9UKV3 1341 aaKnown RBP22.93■■□□□ 1.26
CDH23-209ENST00000466757 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
CDH23-209ENST00000466757 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
CDH23-209ENST00000466757 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
CDH23-209ENST00000466757 NEUROD1Q13562 356 aa22.83■■□□□ 1.25
CDH23-209ENST00000466757 BCANQ96GW7 911 aa22.76■■□□□ 1.23
CDH23-209ENST00000466757 SCRIBQ14160 1630 aa22.63■■□□□ 1.21
CDH23-209ENST00000466757 TRIM52Q96A61 297 aa22.58■■□□□ 1.21
CDH23-209ENST00000466757 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
CDH23-209ENST00000466757 ANP32CO43423 234 aa22.54■■□□□ 1.2
CDH23-209ENST00000466757 P3H3Q8IVL6 736 aa22.51■■□□□ 1.19
CDH23-209ENST00000466757 DAXXQ9UER7 740 aaPredicted RBP22.46■■□□□ 1.19
CDH23-209ENST00000466757 MYT1LQ9UL68 1186 aa22.43■■□□□ 1.18
CDH23-209ENST00000466757 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
CDH23-209ENST00000466757 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.18
CDH23-209ENST00000466757 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
CDH23-209ENST00000466757 MIER1Q8N108 512 aa22.33■■□□□ 1.17
CDH23-209ENST00000466757 CDK11AQ9UQ88 783 aaPredicted RBP22.29■■□□□ 1.16
CDH23-209ENST00000466757 DDX10Q13206 875 aaKnown RBP22.26■■□□□ 1.15
CDH23-209ENST00000466757 RTL5Q5HYW3 569 aaPredicted RBP22.26■■□□□ 1.15
CDH23-209ENST00000466757 ARID3CA6NKF2 412 aa22.24■■□□□ 1.15
CDH23-209ENST00000466757 FKBP8Q14318 412 aa22.23■■□□□ 1.15
CDH23-209ENST00000466757 SLC4A1APQ9BWU0 796 aaKnown RBP22.15■■□□□ 1.14
CDH23-209ENST00000466757 CLSPNQ9HAW4 1339 aa22.14■■□□□ 1.13
CDH23-209ENST00000466757 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
CDH23-209ENST00000466757 CLIP1P30622 1438 aa22.12■■□□□ 1.13
CDH23-209ENST00000466757 TONSLQ96HA7 1378 aa22.07■■□□□ 1.12
CDH23-209ENST00000466757 HNRNPUQ00839 825 aaKnown RBP eCLIP22.06■■□□□ 1.12
CDH23-209ENST00000466757 FBLN2P98095 1184 aa22.05■■□□□ 1.12
CDH23-209ENST00000466757 HIRIP3Q9BW71 556 aaPredicted RBP22.04■■□□□ 1.12
CDH23-209ENST00000466757 ZNF777Q9ULD5 760 aaPredicted RBP21.96■■□□□ 1.11
CDH23-209ENST00000466757 FAM9BQ8IZU0 186 aa21.95■■□□□ 1.1
CDH23-209ENST00000466757 TNIKQ9UKE5 1360 aa21.94■■□□□ 1.1
CDH23-209ENST00000466757 CHIC2Q9UKJ5 165 aa21.93■■□□□ 1.1
CDH23-209ENST00000466757 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
CDH23-209ENST00000466757 EEA1Q15075 1411 aa21.93■■□□□ 1.1
CDH23-209ENST00000466757 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
CDH23-209ENST00000466757 WRNQ14191 1432 aaPredicted RBP eCLIP21.86■■□□□ 1.09
CDH23-209ENST00000466757 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
CDH23-209ENST00000466757 ANP32AP39687 249 aaKnown RBP21.82■■□□□ 1.08
CDH23-209ENST00000466757 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
CDH23-209ENST00000466757 NPM2Q86SE8 214 aaKnown RBP21.81■■□□□ 1.08
CDH23-209ENST00000466757 SALL2Q9Y467 1007 aaPredicted RBP21.76■■□□□ 1.07
CDH23-209ENST00000466757 SOGA1O94964 1423 aa21.76■■□□□ 1.07
CDH23-209ENST00000466757 MRS2Q9HD23 443 aa21.74■■□□□ 1.07
CDH23-209ENST00000466757 MTUS2Q5JR59 1369 aa21.74■■□□□ 1.07
CDH23-209ENST00000466757 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
CDH23-209ENST00000466757 RRP7BPQ9NSQ0 103 aa21.69■■□□□ 1.06
CDH23-209ENST00000466757 SIN3AQ96ST3 1273 aa21.67■■□□□ 1.06
CDH23-209ENST00000466757 CANXP27824 592 aaKnown RBP21.67■■□□□ 1.06
CDH23-209ENST00000466757 TMC1Q8TDI8 760 aa21.67■■□□□ 1.06
CDH23-209ENST00000466757 NACADO15069 1562 aa21.66■■□□□ 1.06
CDH23-209ENST00000466757 CCDC136Q96JN2 1154 aa21.66■■□□□ 1.06
CDH23-209ENST00000466757 EIF4G2P78344 907 aaKnown RBP eCLIP21.63■■□□□ 1.05
CDH23-209ENST00000466757 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
CDH23-209ENST00000466757 BAZ1AQ9NRL2 1556 aaPredicted RBP21.6■■□□□ 1.05
CDH23-209ENST00000466757 KDM2AQ9Y2K7 1162 aa21.59■■□□□ 1.05
CDH23-209ENST00000466757 BCL11AQ9H165 835 aa21.58■■□□□ 1.05
CDH23-209ENST00000466757 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.04
CDH23-209ENST00000466757 NBR1Q14596 966 aa21.57■■□□□ 1.04
CDH23-209ENST00000466757 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
CDH23-209ENST00000466757 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms