RNA–Protein interactions for RNA: ENST00000465258.1

XPNPEP3-204, Transcript of X-prolyl aminopeptidase 3, humanhuman

TSL 3

Gene XPNPEP3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPNPEP3-204ENST00000465258 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
XPNPEP3-204ENST00000465258 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
XPNPEP3-204ENST00000465258 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
XPNPEP3-204ENST00000465258 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
XPNPEP3-204ENST00000465258 FOXD1Q16676 465 aa21.86■■□□□ 1.09
XPNPEP3-204ENST00000465258 PLPPR3Q6T4P5 718 aa21.11■□□□□ 0.97
XPNPEP3-204ENST00000465258 PPP6R1Q9UPN7 881 aa20.69■□□□□ 0.9
XPNPEP3-204ENST00000465258 ADRA2BP18089 450 aa20.57■□□□□ 0.88
XPNPEP3-204ENST00000465258 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
XPNPEP3-204ENST00000465258 MSH5O43196 834 aa20.21■□□□□ 0.83
XPNPEP3-204ENST00000465258 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
XPNPEP3-204ENST00000465258 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
XPNPEP3-204ENST00000465258 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
XPNPEP3-204ENST00000465258 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
XPNPEP3-204ENST00000465258 PPP4R3CPQ6ZMV5 832 aa18.59■□□□□ 0.57
XPNPEP3-204ENST00000465258 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
XPNPEP3-204ENST00000465258 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
XPNPEP3-204ENST00000465258 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
XPNPEP3-204ENST00000465258 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
XPNPEP3-204ENST00000465258 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
XPNPEP3-204ENST00000465258 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
XPNPEP3-204ENST00000465258 KCNA4P22459 653 aa17.63■□□□□ 0.41
XPNPEP3-204ENST00000465258 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
XPNPEP3-204ENST00000465258 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
XPNPEP3-204ENST00000465258 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
XPNPEP3-204ENST00000465258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
XPNPEP3-204ENST00000465258 C1QBPQ07021 282 aaKnown RBP17.05■□□□□ 0.32
XPNPEP3-204ENST00000465258 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
XPNPEP3-204ENST00000465258 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
XPNPEP3-204ENST00000465258 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
XPNPEP3-204ENST00000465258 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
XPNPEP3-204ENST00000465258 CAPN15O75808 1086 aa16.38■□□□□ 0.21
XPNPEP3-204ENST00000465258 DSG3P32926 999 aa16.36■□□□□ 0.21
XPNPEP3-204ENST00000465258 NISCHQ9Y2I1 1504 aa16.33■□□□□ 0.2
XPNPEP3-204ENST00000465258 ZBTB22O15209 634 aa16.31■□□□□ 0.2
XPNPEP3-204ENST00000465258 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
XPNPEP3-204ENST00000465258 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
XPNPEP3-204ENST00000465258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
XPNPEP3-204ENST00000465258 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
XPNPEP3-204ENST00000465258 SAMD1Q6SPF0 538 aaPredicted RBP16.25■□□□□ 0.19
XPNPEP3-204ENST00000465258 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
XPNPEP3-204ENST00000465258 APLP2Q06481 763 aa16.18■□□□□ 0.18
XPNPEP3-204ENST00000465258 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
XPNPEP3-204ENST00000465258 ABCB7O75027 752 aa16.1■□□□□ 0.17
XPNPEP3-204ENST00000465258 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
XPNPEP3-204ENST00000465258 POLA2Q14181 598 aa15.86■□□□□ 0.13
XPNPEP3-204ENST00000465258 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
XPNPEP3-204ENST00000465258 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
XPNPEP3-204ENST00000465258 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
XPNPEP3-204ENST00000465258 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
XPNPEP3-204ENST00000465258 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
XPNPEP3-204ENST00000465258 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
XPNPEP3-204ENST00000465258 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
XPNPEP3-204ENST00000465258 POTEHQ6S545 545 aa15.22■□□□□ 0.03
XPNPEP3-204ENST00000465258 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
XPNPEP3-204ENST00000465258 FBLN2P98095 1184 aa15.17■□□□□ 0.02
XPNPEP3-204ENST00000465258 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
XPNPEP3-204ENST00000465258 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
XPNPEP3-204ENST00000465258 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
XPNPEP3-204ENST00000465258 SPDYE6P0CI01 402 aa15.07■□□□□ 0
XPNPEP3-204ENST00000465258 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
XPNPEP3-204ENST00000465258 SSUH2Q9Y2M2 353 aa15□□□□□ -0.01
XPNPEP3-204ENST00000465258 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
XPNPEP3-204ENST00000465258 ZNF692Q9BU19 519 aaPredicted RBP14.9□□□□□ -0.02
XPNPEP3-204ENST00000465258 PIP4P2Q8N4L2 257 aa14.84□□□□□ -0.03
XPNPEP3-204ENST00000465258 FXR2P51116 673 aaKnown RBP eCLIP14.8□□□□□ -0.04
XPNPEP3-204ENST00000465258 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
XPNPEP3-204ENST00000465258 SPDYE1Q8NFV5 336 aaPredicted RBP14.72□□□□□ -0.05
XPNPEP3-204ENST00000465258 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
XPNPEP3-204ENST00000465258 CCDC180Q9P1Z9 1646 aa14.64□□□□□ -0.07
XPNPEP3-204ENST00000465258 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
XPNPEP3-204ENST00000465258 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
XPNPEP3-204ENST00000465258 CHADLQ6NUI6 762 aa14.47□□□□□ -0.09
XPNPEP3-204ENST00000465258 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
XPNPEP3-204ENST00000465258 EVX2Q03828 476 aa14.44□□□□□ -0.1
XPNPEP3-204ENST00000465258 PROM2Q8N271 834 aa14.43□□□□□ -0.1
XPNPEP3-204ENST00000465258 HAX1O00165 279 aa14.39□□□□□ -0.11
XPNPEP3-204ENST00000465258 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
XPNPEP3-204ENST00000465258 C19orf67A6NJJ6 358 aa14.32□□□□□ -0.12
XPNPEP3-204ENST00000465258 CREBZFQ9NS37 354 aa14.29□□□□□ -0.12
XPNPEP3-204ENST00000465258 STAG3Q9UJ98 1225 aa14.29□□□□□ -0.12
XPNPEP3-204ENST00000465258 ABCC9O60706 1549 aa14.26□□□□□ -0.13
XPNPEP3-204ENST00000465258 FARP1Q9Y4F1 1045 aaPredicted RBP14.25□□□□□ -0.13
XPNPEP3-204ENST00000465258 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
XPNPEP3-204ENST00000465258 FKBP8Q14318 412 aa14.12□□□□□ -0.15
XPNPEP3-204ENST00000465258 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
XPNPEP3-204ENST00000465258 GABBR2O75899 941 aa14.02□□□□□ -0.17
XPNPEP3-204ENST00000465258 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
XPNPEP3-204ENST00000465258 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
XPNPEP3-204ENST00000465258 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
XPNPEP3-204ENST00000465258 POTEIP0CG38 1075 aa13.84□□□□□ -0.19
XPNPEP3-204ENST00000465258 MIER1Q8N108 512 aa13.83□□□□□ -0.2
XPNPEP3-204ENST00000465258 PHF12Q96QT6 1004 aa13.8□□□□□ -0.2
XPNPEP3-204ENST00000465258 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
XPNPEP3-204ENST00000465258 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
XPNPEP3-204ENST00000465258 CLCN6P51797 869 aa13.75□□□□□ -0.21
XPNPEP3-204ENST00000465258 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
XPNPEP3-204ENST00000465258 NACADO15069 1562 aa13.72□□□□□ -0.21
XPNPEP3-204ENST00000465258 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
XPNPEP3-204ENST00000465258 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms