RNA–Protein interactions for RNA: ENST00000464787.1

UBP1-206, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-206ENST00000464787 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
UBP1-206ENST00000464787 CHIC1Q5VXU3 224 aa17.4■□□□□ 0.38
UBP1-206ENST00000464787 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
UBP1-206ENST00000464787 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
UBP1-206ENST00000464787 FOXD1Q16676 465 aa14.8□□□□□ -0.04
UBP1-206ENST00000464787 POTEDQ86YR6 584 aa14.12□□□□□ -0.15
UBP1-206ENST00000464787 MSH5O43196 834 aa13.79□□□□□ -0.2
UBP1-206ENST00000464787 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
UBP1-206ENST00000464787 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
UBP1-206ENST00000464787 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
UBP1-206ENST00000464787 ADRA2BP18089 450 aa13.71□□□□□ -0.21
UBP1-206ENST00000464787 NISCHQ9Y2I1 1504 aa12.93□□□□□ -0.34
UBP1-206ENST00000464787 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
UBP1-206ENST00000464787 DMRT2Q9Y5R5 561 aa12.48□□□□□ -0.41
UBP1-206ENST00000464787 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
UBP1-206ENST00000464787 PPP4R3CPQ6ZMV5 832 aa12.13□□□□□ -0.47
UBP1-206ENST00000464787 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
UBP1-206ENST00000464787 CACNB1Q02641 598 aaPredicted RBP12.06□□□□□ -0.48
UBP1-206ENST00000464787 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
UBP1-206ENST00000464787 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
UBP1-206ENST00000464787 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
UBP1-206ENST00000464787 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
UBP1-206ENST00000464787 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
UBP1-206ENST00000464787 KCNA4P22459 653 aa11.52□□□□□ -0.57
UBP1-206ENST00000464787 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
UBP1-206ENST00000464787 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
UBP1-206ENST00000464787 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
UBP1-206ENST00000464787 NPM3O75607 178 aaKnown RBP11.46□□□□□ -0.57
UBP1-206ENST00000464787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.58
UBP1-206ENST00000464787 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
UBP1-206ENST00000464787 ABCC9O60706 1549 aa11.32□□□□□ -0.6
UBP1-206ENST00000464787 U3KPZ7 1027 aaPredicted RBP11.19□□□□□ -0.62
UBP1-206ENST00000464787 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
UBP1-206ENST00000464787 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
UBP1-206ENST00000464787 CAPN15O75808 1086 aa11.08□□□□□ -0.64
UBP1-206ENST00000464787 DSG3P32926 999 aa11.02□□□□□ -0.65
UBP1-206ENST00000464787 SLC4A2P04920 1241 aa11□□□□□ -0.65
UBP1-206ENST00000464787 POTEHQ6S545 545 aa11□□□□□ -0.65
UBP1-206ENST00000464787 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
UBP1-206ENST00000464787 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
UBP1-206ENST00000464787 ABCB7O75027 752 aa10.87□□□□□ -0.67
UBP1-206ENST00000464787 DCAF8L2P0C7V8 631 aa10.84□□□□□ -0.67
UBP1-206ENST00000464787 RB1CC1Q8TDY2 1594 aa10.82□□□□□ -0.68
UBP1-206ENST00000464787 NACADO15069 1562 aa10.8□□□□□ -0.68
UBP1-206ENST00000464787 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.69
UBP1-206ENST00000464787 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
UBP1-206ENST00000464787 MYO15BQ96JP2 1530 aa10.71□□□□□ -0.69
UBP1-206ENST00000464787 APLP2Q06481 763 aa10.69□□□□□ -0.7
UBP1-206ENST00000464787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.67□□□□□ -0.7
UBP1-206ENST00000464787 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
UBP1-206ENST00000464787 DCAF1Q9Y4B6 1507 aa10.67□□□□□ -0.7
UBP1-206ENST00000464787 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
UBP1-206ENST00000464787 UNC13AQ9UPW8 1703 aa10.63□□□□□ -0.71
UBP1-206ENST00000464787 PABPN1Q86U42 306 aaKnown RBP eCLIP10.59□□□□□ -0.71
UBP1-206ENST00000464787 BICRAQ9NZM4 1560 aa10.56□□□□□ -0.72
UBP1-206ENST00000464787 MYCNP04198 464 aaPredicted RBP10.54□□□□□ -0.72
UBP1-206ENST00000464787 ZBTB22O15209 634 aa10.53□□□□□ -0.72
UBP1-206ENST00000464787 POLA2Q14181 598 aa10.53□□□□□ -0.72
UBP1-206ENST00000464787 SCRIBQ14160 1630 aa10.51□□□□□ -0.73
UBP1-206ENST00000464787 FOXD4L1Q9NU39 408 aa10.48□□□□□ -0.73
UBP1-206ENST00000464787 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
UBP1-206ENST00000464787 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
UBP1-206ENST00000464787 SHROOM4Q9ULL8 1493 aa10.35□□□□□ -0.75
UBP1-206ENST00000464787 CHRDL2Q6WN34 429 aa10.34□□□□□ -0.75
UBP1-206ENST00000464787 EIF4G1Q04637 1599 aaKnown RBP10.25□□□□□ -0.77
UBP1-206ENST00000464787 OSCARQ8IYS5 282 aa10.23□□□□□ -0.77
UBP1-206ENST00000464787 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
UBP1-206ENST00000464787 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
UBP1-206ENST00000464787 ZBTB12Q9Y330 459 aaPredicted RBP10.16□□□□□ -0.78
UBP1-206ENST00000464787 CECR2Q9BXF3 1484 aa10.16□□□□□ -0.78
UBP1-206ENST00000464787 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
UBP1-206ENST00000464787 AMER1Q5JTC6 1135 aaPredicted RBP10.13□□□□□ -0.79
UBP1-206ENST00000464787 PIP4P2Q8N4L2 257 aa10.09□□□□□ -0.79
UBP1-206ENST00000464787 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
UBP1-206ENST00000464787 PITPNM1O00562 1244 aa10.07□□□□□ -0.8
UBP1-206ENST00000464787 SLC24A1O60721 1099 aa10.07□□□□□ -0.8
UBP1-206ENST00000464787 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
UBP1-206ENST00000464787 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
UBP1-206ENST00000464787 SMARCA4P51532 1647 aa10.04□□□□□ -0.8
UBP1-206ENST00000464787 ATAD2BQ9ULI0 1458 aa10□□□□□ -0.81
UBP1-206ENST00000464787 FKBP8Q14318 412 aa10□□□□□ -0.81
UBP1-206ENST00000464787 MROH2BQ7Z745 1585 aa10□□□□□ -0.81
UBP1-206ENST00000464787 BAZ1AQ9NRL2 1556 aaPredicted RBP10□□□□□ -0.81
UBP1-206ENST00000464787 NCAPD3P42695 1498 aa9.98□□□□□ -0.81
UBP1-206ENST00000464787 FXR2P51116 673 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBP1-206ENST00000464787 HAX1O00165 279 aa9.96□□□□□ -0.82
UBP1-206ENST00000464787 SMARCA2P51531 1590 aa9.95□□□□□ -0.82
UBP1-206ENST00000464787 PEG3Q9GZU2 1588 aa9.93□□□□□ -0.82
UBP1-206ENST00000464787 MKRN4PQ13434 485 aaPredicted RBP9.92□□□□□ -0.82
UBP1-206ENST00000464787 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
UBP1-206ENST00000464787 FBLN2P98095 1184 aa9.91□□□□□ -0.82
UBP1-206ENST00000464787 EVX2Q03828 476 aa9.9□□□□□ -0.82
UBP1-206ENST00000464787 BAZ1BQ9UIG0 1483 aaKnown RBP9.9□□□□□ -0.83
UBP1-206ENST00000464787 WIZO95785 1651 aa9.88□□□□□ -0.83
UBP1-206ENST00000464787 SPDYE2BA6NHP3 402 aa9.88□□□□□ -0.83
UBP1-206ENST00000464787 SPDYE6P0CI01 402 aa9.88□□□□□ -0.83
UBP1-206ENST00000464787 SPDYE2Q495Y8 402 aa9.88□□□□□ -0.83
UBP1-206ENST00000464787 RSF1Q96T23 1441 aaPredicted RBP9.86□□□□□ -0.83
UBP1-206ENST00000464787 CLEC11AQ9Y240 323 aa9.86□□□□□ -0.83
UBP1-206ENST00000464787 NESP48681 1621 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms